RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 OSBPL7Q9BZF2 842 aa6.52□□□□□ -1.37
VTA1-204ENST00000491881 CCDC86Q9H6F5 360 aaKnown RBP6.52□□□□□ -1.37
VTA1-204ENST00000491881 FAM8A1Q9UBU6 413 aa6.52□□□□□ -1.37
VTA1-204ENST00000491881 U3KQE9 123 aa6.52□□□□□ -1.37
VTA1-204ENST00000491881 LRRC10BA6NIK2 292 aa6.51□□□□□ -1.37
VTA1-204ENST00000491881 LEFTY1O75610 366 aa6.51□□□□□ -1.37
VTA1-204ENST00000491881 GSTT1P30711 240 aa6.51□□□□□ -1.37
VTA1-204ENST00000491881 ZNF157P51786 506 aaPredicted RBP6.51□□□□□ -1.37
VTA1-204ENST00000491881 FCGRTP55899 365 aa6.51□□□□□ -1.37
VTA1-204ENST00000491881 PTPN12Q05209 780 aaKnown RBP6.51□□□□□ -1.37
VTA1-204ENST00000491881 TTLL4Q14679 1199 aa6.51□□□□□ -1.37
VTA1-204ENST00000491881 PRPF40BQ6NWY9 871 aaKnown RBP6.51□□□□□ -1.37
VTA1-204ENST00000491881 DTHD1Q6ZMT9 781 aa6.51□□□□□ -1.37
VTA1-204ENST00000491881 DUSP23Q9BVJ7 150 aa6.51□□□□□ -1.37
VTA1-204ENST00000491881 TMEM238LA0A1B0GVL6 79 aa6.5□□□□□ -1.37
VTA1-204ENST00000491881 USP17L7P0C7H9 530 aa6.5□□□□□ -1.37
VTA1-204ENST00000491881 XRCC5P13010 732 aaKnown RBP6.5□□□□□ -1.37
VTA1-204ENST00000491881 HCLS1P14317 486 aaPredicted RBP6.5□□□□□ -1.37
VTA1-204ENST00000491881 OXCT1P55809 520 aa6.5□□□□□ -1.37
VTA1-204ENST00000491881 MRPL58Q14197 206 aaKnown RBP6.5□□□□□ -1.37
VTA1-204ENST00000491881 TSNAXIP1Q2TAA8 658 aa6.5□□□□□ -1.37
VTA1-204ENST00000491881 SLC23A3Q6PIS1 610 aa6.5□□□□□ -1.37
VTA1-204ENST00000491881 CRELD1Q96HD1 420 aa6.5□□□□□ -1.37
VTA1-204ENST00000491881 ABCB6Q9NP58 842 aa6.5□□□□□ -1.37
VTA1-204ENST00000491881 DISC1Q9NRI5 854 aa6.5□□□□□ -1.37
VTA1-204ENST00000491881 KIAA1522Q9P206 1035 aaPredicted RBP6.5□□□□□ -1.37
VTA1-204ENST00000491881 PCOLCE2Q9UKZ9 415 aa6.5□□□□□ -1.37
VTA1-204ENST00000491881 ZNF862O60290 1169 aa6.49□□□□□ -1.37
VTA1-204ENST00000491881 ITIH2P19823 946 aa6.49□□□□□ -1.37
VTA1-204ENST00000491881 VAMP1P23763 118 aa6.49□□□□□ -1.37
VTA1-204ENST00000491881 MESP2Q0VG99 397 aa6.49□□□□□ -1.37
VTA1-204ENST00000491881 KIF4BQ2VIQ3 1234 aa6.49□□□□□ -1.37
VTA1-204ENST00000491881 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
VTA1-204ENST00000491881 RPS26P11Q5JNZ5 115 aaPredicted RBP6.49□□□□□ -1.37
VTA1-204ENST00000491881 ZSWIM9Q86XI8 627 aa6.49□□□□□ -1.37
VTA1-204ENST00000491881 FLAD1Q8NFF5 587 aa6.49□□□□□ -1.37
VTA1-204ENST00000491881 BHLHE22Q8NFJ8 381 aaPredicted RBP6.49□□□□□ -1.37
VTA1-204ENST00000491881 SSU72Q9NP77 194 aaKnown RBP6.49□□□□□ -1.37
VTA1-204ENST00000491881 FAM53CQ9NYF3 392 aa6.49□□□□□ -1.37
VTA1-204ENST00000491881 PLAGL2Q9UPG8 496 aa6.49□□□□□ -1.37
VTA1-204ENST00000491881 AKAP2Q9Y2D5 859 aa6.49□□□□□ -1.37
VTA1-204ENST00000491881 GSTP1P09211 210 aaKnown RBP6.48□□□□□ -1.37
VTA1-204ENST00000491881 KCNMB1Q16558 191 aa6.48□□□□□ -1.37
VTA1-204ENST00000491881 PRDM7Q9NQW5 492 aa6.48□□□□□ -1.37
VTA1-204ENST00000491881 KRT82Q9NSB4 513 aa6.48□□□□□ -1.37
VTA1-204ENST00000491881 PCDHGC5Q9Y5F6 944 aa6.48□□□□□ -1.37
VTA1-204ENST00000491881 RECKO95980 971 aa6.47□□□□□ -1.37
VTA1-204ENST00000491881 FAAP100Q0VG06 881 aa6.47□□□□□ -1.37
VTA1-204ENST00000491881 MLANAQ16655 118 aa6.47□□□□□ -1.37
VTA1-204ENST00000491881 TOP6BLQ8N6T0 577 aa6.47□□□□□ -1.37
VTA1-204ENST00000491881 TMEM87AQ8NBN3 555 aa6.47□□□□□ -1.37
VTA1-204ENST00000491881 BACH2Q9BYV9 841 aa6.47□□□□□ -1.37
VTA1-204ENST00000491881 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.47□□□□□ -1.37
VTA1-204ENST00000491881 TTF2Q9UNY4 1162 aaKnown RBP6.47□□□□□ -1.37
VTA1-204ENST00000491881 SNX11Q9Y5W9 270 aa6.47□□□□□ -1.37
VTA1-204ENST00000491881 RAP1GAPP47736 663 aa6.46□□□□□ -1.38
VTA1-204ENST00000491881 IKZF1Q13422 519 aa6.46□□□□□ -1.38
VTA1-204ENST00000491881 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.46□□□□□ -1.38
VTA1-204ENST00000491881 C3orf58Q8NDZ4 430 aa6.46□□□□□ -1.38
VTA1-204ENST00000491881 ASB11Q8WXH4 323 aa6.46□□□□□ -1.38
VTA1-204ENST00000491881 KCNB2Q92953 911 aa6.46□□□□□ -1.38
VTA1-204ENST00000491881 TOX2Q96NM4 488 aa6.46□□□□□ -1.38
VTA1-204ENST00000491881 PPM1HQ9ULR3 514 aa6.46□□□□□ -1.38
VTA1-204ENST00000491881 ZNF503-AS2A6NEH8 195 aa6.45□□□□□ -1.38
VTA1-204ENST00000491881 CTSHP09668 335 aa6.45□□□□□ -1.38
VTA1-204ENST00000491881 RANGAP1P46060 587 aaPredicted RBP6.45□□□□□ -1.38
VTA1-204ENST00000491881 ZP2Q05996 745 aa6.45□□□□□ -1.38
VTA1-204ENST00000491881 TAF1CQ15572 869 aaPredicted RBP6.45□□□□□ -1.38
VTA1-204ENST00000491881 ISL2Q96A47 359 aa6.45□□□□□ -1.38
VTA1-204ENST00000491881 CEP44Q9C0F1 390 aa6.45□□□□□ -1.38
VTA1-204ENST00000491881 TNKS2Q9H2K2 1166 aa6.45□□□□□ -1.38
VTA1-204ENST00000491881 GPN3Q9UHW5 284 aaPredicted RBP6.45□□□□□ -1.38
VTA1-204ENST00000491881 NEFMP07197 916 aa6.44□□□□□ -1.38
VTA1-204ENST00000491881 PPP2R3AQ06190 1150 aa6.44□□□□□ -1.38
VTA1-204ENST00000491881 MEI1Q5TIA1 1274 aa6.44□□□□□ -1.38
VTA1-204ENST00000491881 GTF2IRD1Q9UHL9 959 aa6.44□□□□□ -1.38
VTA1-204ENST00000491881 KRTAP9-7A8MTY7 169 aa6.43□□□□□ -1.38
VTA1-204ENST00000491881 SCAMP3O14828 347 aaKnown RBP6.43□□□□□ -1.38
VTA1-204ENST00000491881 FBXO24O75426 580 aa6.43□□□□□ -1.38
VTA1-204ENST00000491881 ST13P50502 369 aaKnown RBP6.43□□□□□ -1.38
VTA1-204ENST00000491881 CCDC85BQ15834 202 aaPredicted RBP6.43□□□□□ -1.38
VTA1-204ENST00000491881 TPTE2Q6XPS3 522 aa6.43□□□□□ -1.38
VTA1-204ENST00000491881 ZSCAN18Q8TBC5 510 aaPredicted RBP6.43□□□□□ -1.38
VTA1-204ENST00000491881 HEXIM2Q96MH2 286 aaKnown RBP6.43□□□□□ -1.38
VTA1-204ENST00000491881 PPP1R16BQ96T49 567 aa6.43□□□□□ -1.38
VTA1-204ENST00000491881 KRTAP4-11Q9BYQ6 195 aa6.43□□□□□ -1.38
VTA1-204ENST00000491881 TMEM39AQ9NV64 488 aa6.43□□□□□ -1.38
VTA1-204ENST00000491881 TSPAN15O95858 294 aa6.42□□□□□ -1.38
VTA1-204ENST00000491881 ZNF865P0CJ78 1059 aaPredicted RBP6.42□□□□□ -1.38
VTA1-204ENST00000491881 TCF3P15923 654 aa6.42□□□□□ -1.38
VTA1-204ENST00000491881 CFPP27918 469 aa6.42□□□□□ -1.38
VTA1-204ENST00000491881 ZNF76P36508 570 aa6.42□□□□□ -1.38
VTA1-204ENST00000491881 AFMP43652 599 aa6.42□□□□□ -1.38
VTA1-204ENST00000491881 PDZD3Q86UT5 571 aa6.42□□□□□ -1.38
VTA1-204ENST00000491881 RNF214Q8ND24 703 aa6.42□□□□□ -1.38
VTA1-204ENST00000491881 LIN37Q96GY3 246 aaPredicted RBP6.42□□□□□ -1.38
VTA1-204ENST00000491881 CTNND2Q9UQB3 1225 aa6.42□□□□□ -1.38
VTA1-204ENST00000491881 USP31Q70CQ4 1352 aa6.42□□□□□ -1.38
VTA1-204ENST00000491881 ERVK-24P63145 666 aa6.41□□□□□ -1.38
VTA1-204ENST00000491881 ZC3H12AQ5D1E8 599 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms