RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 GABRQQ9UN88 632 aa21.83■■□□□ 1.09
YIPF3-208ENST00000490447 GJB1P08034 283 aa21.82■■□□□ 1.08
YIPF3-208ENST00000490447 GJA8P48165 433 aa21.82■■□□□ 1.08
YIPF3-208ENST00000490447 PABPC4Q13310 644 aaKnown RBP eCLIP21.82■■□□□ 1.081e-7■■□□□ 13.3
YIPF3-208ENST00000490447 PROCA1Q8NCQ7 364 aaPredicted RBP21.82■■□□□ 1.08
YIPF3-208ENST00000490447 ZNF280CQ8ND82 737 aa21.82■■□□□ 1.08
YIPF3-208ENST00000490447 SHISA4Q96DD7 197 aa21.82■■□□□ 1.08
YIPF3-208ENST00000490447 GPR108Q9NPR9 543 aa21.82■■□□□ 1.08
YIPF3-208ENST00000490447 HERC5Q9UII4 1024 aaKnown RBP21.82■■□□□ 1.08
YIPF3-208ENST00000490447 ADCY3O60266 1144 aa21.81■■□□□ 1.08
YIPF3-208ENST00000490447 PLCG2P16885 1265 aa21.81■■□□□ 1.08
YIPF3-208ENST00000490447 FLT3LGP49771 235 aa21.81■■□□□ 1.08
YIPF3-208ENST00000490447 SPP2Q13103 211 aa21.81■■□□□ 1.08
YIPF3-208ENST00000490447 TNNI3KQ59H18 835 aa21.81■■□□□ 1.08
YIPF3-208ENST00000490447 TREML2Q5T2D2 321 aa21.81■■□□□ 1.08
YIPF3-208ENST00000490447 ANKRD13CQ8N6S4 541 aa21.81■■□□□ 1.08
YIPF3-208ENST00000490447 SH3RF3Q8TEJ3 882 aaPredicted RBP21.81■■□□□ 1.08
YIPF3-208ENST00000490447 DPF3Q92784 378 aa21.81■■□□□ 1.08
YIPF3-208ENST00000490447 COA7Q96BR5 231 aa21.81■■□□□ 1.08
YIPF3-208ENST00000490447 AS3MTQ9HBK9 375 aa21.81■■□□□ 1.08
YIPF3-208ENST00000490447 SNRKQ9NRH2 765 aa21.81■■□□□ 1.08
YIPF3-208ENST00000490447 AATFQ9NY61 560 aaKnown RBP eCLIP21.81■■□□□ 1.08
YIPF3-208ENST00000490447 FPGT-TNNI3KV9GXZ4 949 aa21.81■■□□□ 1.08
YIPF3-208ENST00000490447 CAP2P40123 477 aa21.8■■□□□ 1.08
YIPF3-208ENST00000490447 TRIM34Q9BYJ4 488 aa21.8■■□□□ 1.08
YIPF3-208ENST00000490447 DHX36Q9H2U1 1008 aaKnown RBP21.8■■□□□ 1.08
YIPF3-208ENST00000490447 PI4KBQ9UBF8 816 aa21.8■■□□□ 1.08
YIPF3-208ENST00000490447 TAOK2Q9UL54 1235 aa21.8■■□□□ 1.08
YIPF3-208ENST00000490447 USP17L5A8MUK1 530 aa21.8■■□□□ 1.08
YIPF3-208ENST00000490447 SURF6O75683 361 aaKnown RBP21.8■■□□□ 1.08
YIPF3-208ENST00000490447 POLA2Q14181 598 aa21.8■■□□□ 1.08
YIPF3-208ENST00000490447 FAM110CQ1W6H9 321 aa21.8■■□□□ 1.08
YIPF3-208ENST00000490447 SSH3Q8TE77 659 aa21.8■■□□□ 1.08
YIPF3-208ENST00000490447 DBNDD2Q9BQY9 259 aa21.8■■□□□ 1.08
YIPF3-208ENST00000490447 HTATIP2Q9BUP3 242 aa21.8■■□□□ 1.08
YIPF3-208ENST00000490447 H0YGN5 161 aa21.79■■□□□ 1.08
YIPF3-208ENST00000490447 HMGCS2P54868 508 aa21.79■■□□□ 1.08
YIPF3-208ENST00000490447 ATP8B2P98198 1209 aa21.79■■□□□ 1.08
YIPF3-208ENST00000490447 IRF5Q13568 498 aa21.79■■□□□ 1.08
YIPF3-208ENST00000490447 ITPRIPQ8IWB1 547 aa21.79■■□□□ 1.08
YIPF3-208ENST00000490447 PXYLP1Q8TE99 480 aa21.79■■□□□ 1.08
YIPF3-208ENST00000490447 U2AF1L4Q8WU68 220 aaKnown RBP21.79■■□□□ 1.08
YIPF3-208ENST00000490447 COLQQ9Y215 455 aaPredicted RBP21.79■■□□□ 1.08
YIPF3-208ENST00000490447 PHIPQ8WWQ0 1821 aa21.78■■□□□ 1.08
YIPF3-208ENST00000490447 PTPRFP10586 1907 aa21.78■■□□□ 1.08
YIPF3-208ENST00000490447 INHAP05111 366 aa21.78■■□□□ 1.08
YIPF3-208ENST00000490447 ELNP15502 786 aa21.78■■□□□ 1.08
YIPF3-208ENST00000490447 GCLCP48506 637 aaPredicted RBP21.78■■□□□ 1.08
YIPF3-208ENST00000490447 CRACR2BQ8N4Y2 399 aaPredicted RBP21.78■■□□□ 1.08
YIPF3-208ENST00000490447 UNC93B1Q9H1C4 597 aa21.78■■□□□ 1.08
YIPF3-208ENST00000490447 C1orf115Q9H7X2 142 aa21.78■■□□□ 1.08
YIPF3-208ENST00000490447 MGAMO43451 1857 aa21.77■■□□□ 1.08
YIPF3-208ENST00000490447 HNRNPUQ00839 825 aaKnown RBP eCLIP21.77■■□□□ 1.07
YIPF3-208ENST00000490447 MAPKAPK5Q8IW41 473 aa21.77■■□□□ 1.07
YIPF3-208ENST00000490447 TGFBRAP1Q8WUH2 860 aa21.77■■□□□ 1.07
YIPF3-208ENST00000490447 MAST2Q6P0Q8 1798 aa21.77■■□□□ 1.07
YIPF3-208ENST00000490447 FLT1P17948 1338 aa21.76■■□□□ 1.07
YIPF3-208ENST00000490447 IGSF3O75054 1194 aa21.76■■□□□ 1.07
YIPF3-208ENST00000490447 CYP2E1P05181 493 aaPredicted RBP21.76■■□□□ 1.07
YIPF3-208ENST00000490447 ASNSP08243 561 aa21.76■■□□□ 1.07
YIPF3-208ENST00000490447 ZNF512BQ96KM6 892 aaPredicted RBP21.76■■□□□ 1.07
YIPF3-208ENST00000490447 FARP2O94887 1054 aaPredicted RBP21.75■■□□□ 1.07
YIPF3-208ENST00000490447 SGPL1O95470 568 aa21.75■■□□□ 1.07
YIPF3-208ENST00000490447 PPP4CP60510 307 aa21.75■■□□□ 1.07
YIPF3-208ENST00000490447 SH3D19Q5HYK7 790 aa21.75■■□□□ 1.07
YIPF3-208ENST00000490447 ASCC2Q9H1I8 757 aaPredicted RBP21.75■■□□□ 1.07
YIPF3-208ENST00000490447 TMOD4Q9NZQ9 345 aa21.75■■□□□ 1.07
YIPF3-208ENST00000490447 HLA-DOAP06340 250 aa21.74■■□□□ 1.07
YIPF3-208ENST00000490447 CAPN2P17655 700 aa21.74■■□□□ 1.07
YIPF3-208ENST00000490447 ZAP70P43403 619 aa21.74■■□□□ 1.07
YIPF3-208ENST00000490447 FXR1P51114 621 aaKnown RBP eCLIP21.74■■□□□ 1.07
YIPF3-208ENST00000490447 IRX3P78415 501 aaPredicted RBP21.74■■□□□ 1.07
YIPF3-208ENST00000490447 MTMR2Q13614 643 aa21.74■■□□□ 1.07
YIPF3-208ENST00000490447 RRP1BQ14684 758 aaKnown RBP21.74■■□□□ 1.07
YIPF3-208ENST00000490447 LOC285556D6RIA3 1793 aa21.73■■□□□ 1.07
YIPF3-208ENST00000490447 TFRCP02786 760 aaKnown RBP21.73■■□□□ 1.07
YIPF3-208ENST00000490447 CHRDL2Q6WN34 429 aa21.73■■□□□ 1.07
YIPF3-208ENST00000490447 UBE2Q1Q7Z7E8 422 aa21.73■■□□□ 1.07
YIPF3-208ENST00000490447 ADGRA1Q86SQ6 560 aa21.73■■□□□ 1.07
YIPF3-208ENST00000490447 FOXP4Q8IVH2 680 aaPredicted RBP21.73■■□□□ 1.07
YIPF3-208ENST00000490447 DEFB118Q96PH6 123 aa21.73■■□□□ 1.07
YIPF3-208ENST00000490447 WDR18Q9BV38 432 aa21.73■■□□□ 1.07
YIPF3-208ENST00000490447 NOP58Q9Y2X3 529 aaKnown RBP21.73■■□□□ 1.07
YIPF3-208ENST00000490447 NR2E3Q9Y5X4 410 aa21.73■■□□□ 1.07
YIPF3-208ENST00000490447 ATAD5Q96QE3 1844 aa21.73■■□□□ 1.07
YIPF3-208ENST00000490447 BACE1P56817 501 aa21.72■■□□□ 1.07
YIPF3-208ENST00000490447 CCDC8Q9H0W5 538 aaPredicted RBP21.72■■□□□ 1.07
YIPF3-208ENST00000490447 DBNLQ9UJU6 430 aaKnown RBP21.72■■□□□ 1.07
YIPF3-208ENST00000490447 PALD1Q9ULE6 856 aa21.72■■□□□ 1.07
YIPF3-208ENST00000490447 IDH1O75874 414 aaKnown RBP21.71■■□□□ 1.07
YIPF3-208ENST00000490447 CYP7A1P22680 504 aa21.71■■□□□ 1.07
YIPF3-208ENST00000490447 CERS3Q8IU89 383 aa21.71■■□□□ 1.07
YIPF3-208ENST00000490447 PIH1D3Q9NQM4 214 aaKnown RBP21.71■■□□□ 1.07
YIPF3-208ENST00000490447 GINM1Q9NU53 330 aa21.71■■□□□ 1.07
YIPF3-208ENST00000490447 TLR7Q9NYK1 1049 aaKnown RBP21.71■■□□□ 1.07
YIPF3-208ENST00000490447 SAP30BPQ9UHR5 308 aaKnown RBP21.71■■□□□ 1.07
YIPF3-208ENST00000490447 C19orf81C9J6K1 198 aa21.7■■□□□ 1.06
YIPF3-208ENST00000490447 USP17L10C9JJH3 530 aa21.7■■□□□ 1.06
YIPF3-208ENST00000490447 ZBTB7BO15156 539 aaPredicted RBP21.7■■□□□ 1.06
YIPF3-208ENST00000490447 GDF11O95390 407 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms