RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 MAP3K10Q02779 954 aa12.98□□□□□ -0.33
TFF3-203ENST00000489676 MAP1SQ66K74 1059 aaPredicted RBP12.98□□□□□ -0.33
TFF3-203ENST00000489676 CREB3L3Q68CJ9 461 aa12.98□□□□□ -0.33
TFF3-203ENST00000489676 DLK2Q6UY11 383 aa12.98□□□□□ -0.33
TFF3-203ENST00000489676 C16orf86Q6ZW13 317 aa12.98□□□□□ -0.33
TFF3-203ENST00000489676 IL17RAQ96F46 866 aa12.98□□□□□ -0.33
TFF3-203ENST00000489676 CTNNA3Q9UI47 895 aa12.98□□□□□ -0.33
TFF3-203ENST00000489676 TAOK2Q9UL54 1235 aa12.98□□□□□ -0.33
TFF3-203ENST00000489676 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.98□□□□□ -0.33
TFF3-203ENST00000489676 TBC1D12O60347 775 aa12.97□□□□□ -0.33
TFF3-203ENST00000489676 POLR3DP05423 398 aaPredicted RBP12.97□□□□□ -0.33
TFF3-203ENST00000489676 HLA-DOAP06340 250 aa12.97□□□□□ -0.33
TFF3-203ENST00000489676 FGRP09769 529 aa12.97□□□□□ -0.33
TFF3-203ENST00000489676 HAND2P61296 217 aa12.97□□□□□ -0.33
TFF3-203ENST00000489676 IMMTQ16891 758 aaKnown RBP12.97□□□□□ -0.33
TFF3-203ENST00000489676 NBPF12Q5TAG4 269 aaPredicted RBP12.97□□□□□ -0.33
TFF3-203ENST00000489676 PRAMEF18Q5VWM3 479 aa12.97□□□□□ -0.33
TFF3-203ENST00000489676 CHADLQ6NUI6 762 aa12.97□□□□□ -0.33
TFF3-203ENST00000489676 STOX1Q6ZVD7 989 aa12.97□□□□□ -0.33
TFF3-203ENST00000489676 CDC37L1Q7L3B6 337 aa12.97□□□□□ -0.33
TFF3-203ENST00000489676 TTC6Q86TZ1 520 aa12.97□□□□□ -0.33
TFF3-203ENST00000489676 RASEFQ8IZ41 740 aa12.97□□□□□ -0.33
TFF3-203ENST00000489676 DYNLL2Q96FJ2 89 aa12.97□□□□□ -0.33
TFF3-203ENST00000489676 PI4KBQ9UBF8 816 aa12.97□□□□□ -0.33
TFF3-203ENST00000489676 SERPINB13Q9UIV8 391 aa12.97□□□□□ -0.33
TFF3-203ENST00000489676 TRPM7Q96QT4 1865 aa12.97□□□□□ -0.33
TFF3-203ENST00000489676 NEDD4P46934 1319 aa12.96□□□□□ -0.33
TFF3-203ENST00000489676 MINDY4BA8MYZ0 360 aa12.96□□□□□ -0.33
TFF3-203ENST00000489676 CAPN15O75808 1086 aa12.96□□□□□ -0.33
TFF3-203ENST00000489676 ITGBL1O95965 494 aaPredicted RBP12.96□□□□□ -0.33
TFF3-203ENST00000489676 CTDSPL2Q05D32 466 aa12.96□□□□□ -0.33
TFF3-203ENST00000489676 TSGA10IPQ3SY00 556 aa12.96□□□□□ -0.33
TFF3-203ENST00000489676 USP48Q86UV5 1035 aa12.96□□□□□ -0.33
TFF3-203ENST00000489676 ZSCAN29Q8IWY8 852 aaPredicted RBP12.96□□□□□ -0.33
TFF3-203ENST00000489676 AMOTL1Q8IY63 956 aa12.96□□□□□ -0.33
TFF3-203ENST00000489676 SLC44A5Q8NCS7 719 aa12.96□□□□□ -0.33
TFF3-203ENST00000489676 STAG1Q8WVM7 1258 aa12.96□□□□□ -0.33
TFF3-203ENST00000489676 CDCA5Q96FF9 252 aa12.96□□□□□ -0.33
TFF3-203ENST00000489676 HERC5Q9UII4 1024 aaKnown RBP12.96□□□□□ -0.33
TFF3-203ENST00000489676 CLEC11AQ9Y240 323 aa12.96□□□□□ -0.33
TFF3-203ENST00000489676 SNX14Q9Y5W7 946 aa12.96□□□□□ -0.33
TFF3-203ENST00000489676 DOCK1Q14185 1865 aa12.95□□□□□ -0.34
TFF3-203ENST00000489676 ATAD5Q96QE3 1844 aa12.95□□□□□ -0.34
TFF3-203ENST00000489676 FAM196BA6NMK8 535 aa12.95□□□□□ -0.34
TFF3-203ENST00000489676 TRAF5O00463 557 aa12.95□□□□□ -0.34
TFF3-203ENST00000489676 ZNF213O14771 459 aa12.95□□□□□ -0.34
TFF3-203ENST00000489676 SHMT1P34896 483 aa12.95□□□□□ -0.34
TFF3-203ENST00000489676 RBM25P49756 843 aaKnown RBP12.95□□□□□ -0.34
TFF3-203ENST00000489676 AKNAD1Q5T1N1 836 aa12.95□□□□□ -0.34
TFF3-203ENST00000489676 FOXP4Q8IVH2 680 aaPredicted RBP12.95□□□□□ -0.34
TFF3-203ENST00000489676 DNAJC5GQ8N7S2 189 aa12.95□□□□□ -0.34
TFF3-203ENST00000489676 NKX2-3Q8TAU0 364 aa12.95□□□□□ -0.34
TFF3-203ENST00000489676 TBC1D32Q96NH3 1257 aa12.95□□□□□ -0.34
TFF3-203ENST00000489676 PLIN4Q96Q06 1357 aa12.94□□□□□ -0.34
TFF3-203ENST00000489676 PASKQ96RG2 1323 aa12.94□□□□□ -0.34
TFF3-203ENST00000489676 PHF20L1A8MW92 1017 aa12.94□□□□□ -0.34
TFF3-203ENST00000489676 ORC4O43929 436 aa12.94□□□□□ -0.34
TFF3-203ENST00000489676 PCP11498 1178 aaKnown RBP12.94□□□□□ -0.34
TFF3-203ENST00000489676 RASA1P20936 1047 aa12.94□□□□□ -0.34
TFF3-203ENST00000489676 CDK8P49336 464 aa12.94□□□□□ -0.34
TFF3-203ENST00000489676 FMR1Q06787 632 aaKnown RBP eCLIP12.94□□□□□ -0.34
TFF3-203ENST00000489676 COL9A3Q14050 684 aaPredicted RBP12.94□□□□□ -0.34
TFF3-203ENST00000489676 RRP1BQ14684 758 aaKnown RBP12.94□□□□□ -0.34
TFF3-203ENST00000489676 RNF20Q5VTR2 975 aa12.94□□□□□ -0.34
TFF3-203ENST00000489676 TATDN1Q6P1N9 297 aa12.94□□□□□ -0.34
TFF3-203ENST00000489676 RBM46Q8TBY0 533 aaKnown RBP12.94□□□□□ -0.34
TFF3-203ENST00000489676 INCENPQ9NQS7 918 aa12.94□□□□□ -0.34
TFF3-203ENST00000489676 SWAP70Q9UH65 585 aa12.94□□□□□ -0.34
TFF3-203ENST00000489676 E7EWF7 191 aa12.93□□□□□ -0.34
TFF3-203ENST00000489676 TOMM70O94826 608 aa12.93□□□□□ -0.34
TFF3-203ENST00000489676 MCCP23508 829 aa12.93□□□□□ -0.34
TFF3-203ENST00000489676 ANAPC15P60006 121 aa12.93□□□□□ -0.34
TFF3-203ENST00000489676 ADCK5Q3MIX3 580 aa12.93□□□□□ -0.34
TFF3-203ENST00000489676 SUPT20HL1Q3ZLR7 823 aa12.93□□□□□ -0.34
TFF3-203ENST00000489676 MIGA2Q7L4E1 593 aa12.93□□□□□ -0.34
TFF3-203ENST00000489676 HOOK2Q96ED9 719 aa12.93□□□□□ -0.34
TFF3-203ENST00000489676 KIF2CQ99661 725 aa12.93□□□□□ -0.34
TFF3-203ENST00000489676 C22orf23Q9BZE7 217 aa12.93□□□□□ -0.34
TFF3-203ENST00000489676 RNF41Q9H4P4 317 aaPredicted RBP12.93□□□□□ -0.34
TFF3-203ENST00000489676 ZNF112Q9UJU3 913 aa12.93□□□□□ -0.34
TFF3-203ENST00000489676 PRDM1O75626 825 aa12.92□□□□□ -0.34
TFF3-203ENST00000489676 SLC3A2P08195 630 aaKnown RBP12.92□□□□□ -0.34
TFF3-203ENST00000489676 ZKSCAN1P17029 563 aaPredicted RBP12.92□□□□□ -0.34
TFF3-203ENST00000489676 PDE4BQ07343 736 aa12.92□□□□□ -0.34
TFF3-203ENST00000489676 MAP3K11Q16584 847 aa12.92□□□□□ -0.34
TFF3-203ENST00000489676 SHROOM1Q2M3G4 852 aaPredicted RBP12.92□□□□□ -0.34
TFF3-203ENST00000489676 COL13A1Q5TAT6 717 aaPredicted RBP12.92□□□□□ -0.34
TFF3-203ENST00000489676 DCAF15Q66K64 600 aa12.92□□□□□ -0.34
TFF3-203ENST00000489676 MB21D2Q8IYB1 491 aaPredicted RBP12.92□□□□□ -0.34
TFF3-203ENST00000489676 CRACR2BQ8N4Y2 399 aaPredicted RBP12.92□□□□□ -0.34
TFF3-203ENST00000489676 SMC1BQ8NDV3 1235 aa12.92□□□□□ -0.34
TFF3-203ENST00000489676 UPF2Q9HAU5 1272 aaKnown RBP12.92□□□□□ -0.34
TFF3-203ENST00000489676 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.92□□□□□ -0.34
TFF3-203ENST00000489676 FZD1Q9UP38 647 aa12.92□□□□□ -0.34
TFF3-203ENST00000489676 PHIPQ8WWQ0 1821 aa12.92□□□□□ -0.34
TFF3-203ENST00000489676 USP2O75604 605 aaPredicted RBP12.91□□□□□ -0.34
TFF3-203ENST00000489676 NT5C2P49902 561 aa12.91□□□□□ -0.34
TFF3-203ENST00000489676 JAG1P78504 1218 aa12.91□□□□□ -0.34
TFF3-203ENST00000489676 KRT32Q14532 448 aa12.91□□□□□ -0.34
TFF3-203ENST00000489676 MFSD6Q6ZSS7 791 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms