RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 TBC1D9Q6ZT07 1266 aa23.88■■□□□ 1.41
APTX-229ENST00000489583 ANKRD13CQ8N6S4 541 aa23.88■■□□□ 1.41
APTX-229ENST00000489583 ZNF280CQ8ND82 737 aa23.88■■□□□ 1.41
APTX-229ENST00000489583 PXYLP1Q8TE99 480 aa23.88■■□□□ 1.41
APTX-229ENST00000489583 CLUAP1Q96AJ1 413 aa23.88■■□□□ 1.41
APTX-229ENST00000489583 HERC5Q9UII4 1024 aaKnown RBP23.88■■□□□ 1.41
APTX-229ENST00000489583 GABRQQ9UN88 632 aa23.88■■□□□ 1.41
APTX-229ENST00000489583 GCLCP48506 637 aaPredicted RBP23.87■■□□□ 1.41
APTX-229ENST00000489583 SPP2Q13103 211 aa23.87■■□□□ 1.41
APTX-229ENST00000489583 NAA16Q6N069 864 aaPredicted RBP23.87■■□□□ 1.41
APTX-229ENST00000489583 U2AF1L4Q8WU68 220 aaKnown RBP23.87■■□□□ 1.41
APTX-229ENST00000489583 DHX36Q9H2U1 1008 aaKnown RBP23.87■■□□□ 1.41
APTX-229ENST00000489583 USP17L5A8MUK1 530 aa23.86■■□□□ 1.41
APTX-229ENST00000489583 FARP2O94887 1054 aaPredicted RBP23.86■■□□□ 1.41
APTX-229ENST00000489583 PI16Q6UXB8 463 aa23.86■■□□□ 1.41
APTX-229ENST00000489583 PI4KBQ9UBF8 816 aa23.86■■□□□ 1.41
APTX-229ENST00000489583 FAM196BA6NMK8 535 aa23.85■■□□□ 1.41
APTX-229ENST00000489583 IRF5Q13568 498 aa23.85■■□□□ 1.41
APTX-229ENST00000489583 FAM110CQ1W6H9 321 aa23.85■■□□□ 1.41
APTX-229ENST00000489583 CRACR2BQ8N4Y2 399 aaPredicted RBP23.85■■□□□ 1.41
APTX-229ENST00000489583 SHISA4Q96DD7 197 aa23.85■■□□□ 1.41
APTX-229ENST00000489583 UNC93B1Q9H1C4 597 aa23.85■■□□□ 1.41
APTX-229ENST00000489583 TMOD4Q9NZQ9 345 aa23.85■■□□□ 1.41
APTX-229ENST00000489583 DOCK1Q14185 1865 aa23.85■■□□□ 1.41
APTX-229ENST00000489583 SGPL1O95470 568 aa23.84■■□□□ 1.41
APTX-229ENST00000489583 INHAP05111 366 aa23.84■■□□□ 1.41
APTX-229ENST00000489583 ELNP15502 786 aa23.84■■□□□ 1.41
APTX-229ENST00000489583 CAP2P40123 477 aa23.84■■□□□ 1.41
APTX-229ENST00000489583 FXR1P51114 621 aaKnown RBP eCLIP23.84■■□□□ 1.41
APTX-229ENST00000489583 HMGCS2P54868 508 aa23.84■■□□□ 1.41
APTX-229ENST00000489583 ZKSCAN2Q63HK3 967 aa23.84■■□□□ 1.41
APTX-229ENST00000489583 CHRDL2Q6WN34 429 aa23.84■■□□□ 1.41
APTX-229ENST00000489583 FTSJ3Q8IY81 847 aaKnown RBP23.84■■□□□ 1.41
APTX-229ENST00000489583 COL2A1P02458 1487 aaPredicted RBP23.83■■□□□ 1.41
APTX-229ENST00000489583 PNMA6EA0A0J9YXQ4 647 aa23.83■■□□□ 1.41
APTX-229ENST00000489583 MCAMP43121 646 aa23.83■■□□□ 1.41
APTX-229ENST00000489583 IRX3P78415 501 aaPredicted RBP23.83■■□□□ 1.41
APTX-229ENST00000489583 TREML2Q5T2D2 321 aa23.83■■□□□ 1.41
APTX-229ENST00000489583 CCDC84Q86UT8 332 aaPredicted RBP23.83■■□□□ 1.41
APTX-229ENST00000489583 MIER1Q8N108 512 aa23.83■■□□□ 1.41
APTX-229ENST00000489583 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.83■■□□□ 1.41
APTX-229ENST00000489583 BCAR3O75815 825 aa23.82■■□□□ 1.4
APTX-229ENST00000489583 SLURP2P0DP57 97 aa23.82■■□□□ 1.4
APTX-229ENST00000489583 CCAR1Q8IX12 1150 aaKnown RBP23.82■■□□□ 1.4
APTX-229ENST00000489583 GPR108Q9NPR9 543 aa23.82■■□□□ 1.4
APTX-229ENST00000489583 AATFQ9NY61 560 aaKnown RBP eCLIP23.82■■□□□ 1.4
APTX-229ENST00000489583 EVI5O60447 810 aa23.81■■□□□ 1.4
APTX-229ENST00000489583 IGSF3O75054 1194 aa23.81■■□□□ 1.4
APTX-229ENST00000489583 HLA-DOAP06340 250 aa23.81■■□□□ 1.4
APTX-229ENST00000489583 ASNSP08243 561 aa23.81■■□□□ 1.4
APTX-229ENST00000489583 SH3RF3Q8TEJ3 882 aaPredicted RBP23.81■■□□□ 1.4
APTX-229ENST00000489583 DEFB118Q96PH6 123 aa23.81■■□□□ 1.4
APTX-229ENST00000489583 SNRKQ9NRH2 765 aa23.81■■□□□ 1.4
APTX-229ENST00000489583 SURF6O75683 361 aaKnown RBP23.8■■□□□ 1.4
APTX-229ENST00000489583 TNNI3KQ59H18 835 aa23.8■■□□□ 1.4
APTX-229ENST00000489583 ZNF384Q8TF68 577 aa23.8■■□□□ 1.4
APTX-229ENST00000489583 TGFBRAP1Q8WUH2 860 aa23.8■■□□□ 1.4
APTX-229ENST00000489583 FPGT-TNNI3KV9GXZ4 949 aa23.8■■□□□ 1.4
APTX-229ENST00000489583 MGAMO43451 1857 aa23.79■■□□□ 1.4
APTX-229ENST00000489583 CERS3Q8IU89 383 aa23.79■■□□□ 1.4
APTX-229ENST00000489583 FOXP4Q8IVH2 680 aaPredicted RBP23.79■■□□□ 1.4
APTX-229ENST00000489583 ASCC2Q9H1I8 757 aaPredicted RBP23.79■■□□□ 1.4
APTX-229ENST00000489583 GINM1Q9NU53 330 aa23.79■■□□□ 1.4
APTX-229ENST00000489583 TMEM57Q8N5G2 664 aa23.78■■□□□ 1.4
APTX-229ENST00000489583 CWC22Q9HCG8 908 aaKnown RBP23.78■■□□□ 1.4
APTX-229ENST00000489583 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.78■■□□□ 1.4
APTX-229ENST00000489583 C19orf81C9J6K1 198 aa23.77■■□□□ 1.4
APTX-229ENST00000489583 HMGCRP04035 888 aa23.77■■□□□ 1.4
APTX-229ENST00000489583 MTMR2Q13614 643 aa23.77■■□□□ 1.4
APTX-229ENST00000489583 MAPKAPK5Q8IW41 473 aa23.77■■□□□ 1.4
APTX-229ENST00000489583 BACE1P56817 501 aa23.76■■□□□ 1.39
APTX-229ENST00000489583 ATP8B2P98198 1209 aa23.76■■□□□ 1.39
APTX-229ENST00000489583 PDE3AQ14432 1141 aa23.76■■□□□ 1.39
APTX-229ENST00000489583 SH3D19Q5HYK7 790 aa23.76■■□□□ 1.39
APTX-229ENST00000489583 NECAB2Q7Z6G3 386 aa23.76■■□□□ 1.39
APTX-229ENST00000489583 UBE2Q1Q7Z7E8 422 aa23.76■■□□□ 1.39
APTX-229ENST00000489583 ITPRIPQ8IWB1 547 aa23.76■■□□□ 1.39
APTX-229ENST00000489583 DBNDD2Q9BQY9 259 aa23.76■■□□□ 1.39
APTX-229ENST00000489583 WDR18Q9BV38 432 aa23.76■■□□□ 1.39
APTX-229ENST00000489583 USP17L10C9JJH3 530 aa23.75■■□□□ 1.39
APTX-229ENST00000489583 PPP4CP60510 307 aa23.75■■□□□ 1.39
APTX-229ENST00000489583 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.75■■□□□ 1.39
APTX-229ENST00000489583 HMX1Q9NP08 348 aaPredicted RBP23.75■■□□□ 1.39
APTX-229ENST00000489583 PAK6Q9NQU5 681 aaPredicted RBP23.75■■□□□ 1.39
APTX-229ENST00000489583 RBM27Q9P2N5 1060 aaKnown RBP23.75■■□□□ 1.39
APTX-229ENST00000489583 USP5P45974 858 aa23.74■■□□□ 1.39
APTX-229ENST00000489583 POLA2Q14181 598 aa23.74■■□□□ 1.39
APTX-229ENST00000489583 GPRC5AQ8NFJ5 357 aa23.74■■□□□ 1.39
APTX-229ENST00000489583 SSH3Q8TE77 659 aa23.74■■□□□ 1.39
APTX-229ENST00000489583 GTF3C2Q8WUA4 911 aaPredicted RBP23.74■■□□□ 1.39
APTX-229ENST00000489583 ZNF512BQ96KM6 892 aaPredicted RBP23.74■■□□□ 1.39
APTX-229ENST00000489583 TNNQ9UQP3 1299 aa23.74■■□□□ 1.39
APTX-229ENST00000489583 FLT1P17948 1338 aa23.74■■□□□ 1.39
APTX-229ENST00000489583 PTPRFP10586 1907 aa23.74■■□□□ 1.39
APTX-229ENST00000489583 PHIPQ8WWQ0 1821 aa23.73■■□□□ 1.39
APTX-229ENST00000489583 IDH1O75874 414 aaKnown RBP23.73■■□□□ 1.39
APTX-229ENST00000489583 CYP2E1P05181 493 aaPredicted RBP23.73■■□□□ 1.39
APTX-229ENST00000489583 CYP7A1P22680 504 aa23.73■■□□□ 1.39
APTX-229ENST00000489583 PALD1Q9ULE6 856 aa23.73■■□□□ 1.39
APTX-229ENST00000489583 CEP290O15078 2479 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms