RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 NELFBQ8WX92 580 aa19.67■□□□□ 0.74
NPHP4-209ENST00000489180 LRRC45Q96CN5 670 aa19.67■□□□□ 0.74
NPHP4-209ENST00000489180 MAK16Q9BXY0 300 aaKnown RBP19.67■□□□□ 0.74
NPHP4-209ENST00000489180 TRIM7Q9C029 511 aa19.67■□□□□ 0.74
NPHP4-209ENST00000489180 WDR7Q9Y4E6 1490 aa19.67■□□□□ 0.74
NPHP4-209ENST00000489180 CA8P35219 290 aa19.67■□□□□ 0.74
NPHP4-209ENST00000489180 UTP11Q9Y3A2 253 aaKnown RBP19.67■□□□□ 0.74
NPHP4-209ENST00000489180 GSPT1P15170 499 aaKnown RBP19.67■□□□□ 0.74
NPHP4-209ENST00000489180 LACTBP83111 547 aaPredicted RBP19.67■□□□□ 0.74
NPHP4-209ENST00000489180 RAD51AP2Q09MP3 1159 aa19.67■□□□□ 0.74
NPHP4-209ENST00000489180 MAEAQ7L5Y9 396 aa19.67■□□□□ 0.74
NPHP4-209ENST00000489180 FAM169AQ9Y6X4 670 aa19.67■□□□□ 0.74
NPHP4-209ENST00000489180 ARHGAP6O43182 974 aa19.67■□□□□ 0.74
NPHP4-209ENST00000489180 BRD1O95696 1058 aa19.67■□□□□ 0.74
NPHP4-209ENST00000489180 IRX5P78411 483 aaPredicted RBP19.67■□□□□ 0.74
NPHP4-209ENST00000489180 KBTBD3Q8NAB2 608 aa19.67■□□□□ 0.74
NPHP4-209ENST00000489180 AATFQ9NY61 560 aaKnown RBP eCLIP19.67■□□□□ 0.741e-7■■■■■ 28.7
NPHP4-209ENST00000489180 CFAP157Q5JU67 520 aa19.66■□□□□ 0.74
NPHP4-209ENST00000489180 PKP1Q13835 747 aa19.66■□□□□ 0.74
NPHP4-209ENST00000489180 MAP7D1Q3KQU3 841 aa19.66■□□□□ 0.74
NPHP4-209ENST00000489180 CHAMP1Q96JM3 812 aa19.66■□□□□ 0.74
NPHP4-209ENST00000489180 IFT20Q8IY31 132 aa19.66■□□□□ 0.74
NPHP4-209ENST00000489180 RSRC1Q96IZ7 334 aaKnown RBP19.66■□□□□ 0.74
NPHP4-209ENST00000489180 AGTPBP1Q9UPW5 1226 aa19.66■□□□□ 0.74
NPHP4-209ENST00000489180 RTCBQ9Y3I0 505 aaKnown RBP19.66■□□□□ 0.74
NPHP4-209ENST00000489180 PCDH11XQ9BZA7 1347 aa19.66■□□□□ 0.74
NPHP4-209ENST00000489180 PCDH11YQ9BZA8 1340 aa19.66■□□□□ 0.74
NPHP4-209ENST00000489180 CEP104O60308 925 aa19.66■□□□□ 0.74
NPHP4-209ENST00000489180 VWA3BQ502W6 1294 aa19.66■□□□□ 0.74
NPHP4-209ENST00000489180 DAAM2Q86T65 1068 aa19.66■□□□□ 0.74
NPHP4-209ENST00000489180 BCL2L12Q9HB09 334 aa19.66■□□□□ 0.74
NPHP4-209ENST00000489180 STIM2Q9P246 746 aa19.66■□□□□ 0.74
NPHP4-209ENST00000489180 GOLGA6BA6NDN3 693 aa19.65■□□□□ 0.74
NPHP4-209ENST00000489180 CCDC169A6NNP5 214 aa19.65■□□□□ 0.74
NPHP4-209ENST00000489180 B4GALNT4Q76KP1 1039 aa19.65■□□□□ 0.74
NPHP4-209ENST00000489180 ZAP70P43403 619 aa19.65■□□□□ 0.74
NPHP4-209ENST00000489180 MRPL12P52815 198 aaKnown RBP19.65■□□□□ 0.74
NPHP4-209ENST00000489180 NCAPH2Q6IBW4 605 aa19.65■□□□□ 0.74
NPHP4-209ENST00000489180 TMTC1Q8IUR5 882 aa19.65■□□□□ 0.74
NPHP4-209ENST00000489180 E7EWF7 191 aa19.65■□□□□ 0.74
NPHP4-209ENST00000489180 PPP1R21Q6ZMI0 780 aa19.65■□□□□ 0.74
NPHP4-209ENST00000489180 DDX23Q9BUQ8 820 aaKnown RBP19.65■□□□□ 0.74
NPHP4-209ENST00000489180 PPP1R2P41236 205 aa19.65■□□□□ 0.74
NPHP4-209ENST00000489180 INF2Q27J81 1249 aa19.65■□□□□ 0.74
NPHP4-209ENST00000489180 NELFCDQ8IXH7 590 aa19.65■□□□□ 0.74
NPHP4-209ENST00000489180 SERTAD1Q9UHV2 236 aa19.65■□□□□ 0.74
NPHP4-209ENST00000489180 INPP5BP32019 993 aa19.64■□□□□ 0.74
NPHP4-209ENST00000489180 TUBB2AQ13885 445 aa19.64■□□□□ 0.74
NPHP4-209ENST00000489180 TTC6Q86TZ1 520 aa19.64■□□□□ 0.74
NPHP4-209ENST00000489180 FNBP1Q96RU3 617 aa19.64■□□□□ 0.74
NPHP4-209ENST00000489180 TUBB2BQ9BVA1 445 aa19.64■□□□□ 0.74
NPHP4-209ENST00000489180 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.64■□□□□ 0.74
NPHP4-209ENST00000489180 YTHDC2Q9H6S0 1430 aaKnown RBP19.64■□□□□ 0.73
NPHP4-209ENST00000489180 WDR44Q5JSH3 913 aa19.64■□□□□ 0.73
NPHP4-209ENST00000489180 C8orf37Q96NL8 207 aa19.64■□□□□ 0.73
NPHP4-209ENST00000489180 NAP1L3Q99457 506 aaPredicted RBP19.64■□□□□ 0.73
NPHP4-209ENST00000489180 CALUO43852 315 aaPredicted RBP19.64■□□□□ 0.73
NPHP4-209ENST00000489180 NR1I2O75469 434 aa19.64■□□□□ 0.73
NPHP4-209ENST00000489180 A1BGP04217 495 aa19.64■□□□□ 0.73
NPHP4-209ENST00000489180 VPS54Q9P1Q0 977 aa19.64■□□□□ 0.73
NPHP4-209ENST00000489180 MAGEA1P43355 309 aa19.64■□□□□ 0.73
NPHP4-209ENST00000489180 MSANTD4Q8NCY6 345 aa19.64■□□□□ 0.73
NPHP4-209ENST00000489180 ANAPC4Q9UJX5 808 aa19.64■□□□□ 0.73
NPHP4-209ENST00000489180 ERCC5P28715 1186 aaPredicted RBP19.63■□□□□ 0.73
NPHP4-209ENST00000489180 HIBADHP31937 336 aaKnown RBP19.63■□□□□ 0.73
NPHP4-209ENST00000489180 SND1Q7KZF4 910 aaKnown RBP eCLIP19.63■□□□□ 0.73
NPHP4-209ENST00000489180 GPR161Q8N6U8 529 aaKnown RBP19.63■□□□□ 0.73
NPHP4-209ENST00000489180 SNX29Q8TEQ0 813 aa19.63■□□□□ 0.73
NPHP4-209ENST00000489180 KIFAP3Q92845 792 aa19.63■□□□□ 0.73
NPHP4-209ENST00000489180 NAP1L4Q99733 375 aaKnown RBP19.63■□□□□ 0.73
NPHP4-209ENST00000489180 PALD1Q9ULE6 856 aa19.63■□□□□ 0.73
NPHP4-209ENST00000489180 TCOF1Q13428 1488 aaKnown RBP19.63■□□□□ 0.73
NPHP4-209ENST00000489180 ZNF532Q9HCE3 1301 aa19.63■□□□□ 0.73
NPHP4-209ENST00000489180 PTH1RQ03431 593 aa19.63■□□□□ 0.73
NPHP4-209ENST00000489180 ACTN4O43707 911 aaKnown RBP19.63■□□□□ 0.73
NPHP4-209ENST00000489180 SLC9C1Q4G0N8 1177 aa19.63■□□□□ 0.73
NPHP4-209ENST00000489180 CMTR1Q8N1G2 835 aaKnown RBP19.63■□□□□ 0.73
NPHP4-209ENST00000489180 NUP58Q9BVL2 599 aa19.63■□□□□ 0.73
NPHP4-209ENST00000489180 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.63■□□□□ 0.73
NPHP4-209ENST00000489180 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.63■□□□□ 0.73
NPHP4-209ENST00000489180 DDX39AO00148 427 aaKnown RBP19.63■□□□□ 0.73
NPHP4-209ENST00000489180 CETN3O15182 167 aa19.63■□□□□ 0.73
NPHP4-209ENST00000489180 LRMPQ12912 555 aa19.63■□□□□ 0.73
NPHP4-209ENST00000489180 STMN2Q93045 179 aa19.63■□□□□ 0.73
NPHP4-209ENST00000489180 VTI1AQ96AJ9 217 aa19.63■□□□□ 0.73
NPHP4-209ENST00000489180 LRWD1Q9UFC0 647 aa19.63■□□□□ 0.73
NPHP4-209ENST00000489180 TFCP2L1Q9NZI6 479 aa19.62■□□□□ 0.73
NPHP4-209ENST00000489180 ARHGEF12Q9NZN5 1544 aa19.62■□□□□ 0.73
NPHP4-209ENST00000489180 RASA3Q14644 834 aa19.62■□□□□ 0.73
NPHP4-209ENST00000489180 TYW1BQ6NUM6 668 aa19.62■□□□□ 0.73
NPHP4-209ENST00000489180 DESI2Q9BSY9 194 aa19.62■□□□□ 0.73
NPHP4-209ENST00000489180 ATP5DP30049 168 aa19.62■□□□□ 0.73
NPHP4-209ENST00000489180 IRX3P78415 501 aaPredicted RBP19.62■□□□□ 0.73
NPHP4-209ENST00000489180 UFL1O94874 794 aa19.62■□□□□ 0.73
NPHP4-209ENST00000489180 ATP11AP98196 1134 aa19.62■□□□□ 0.73
NPHP4-209ENST00000489180 HERC4Q5GLZ8 1057 aaPredicted RBP19.62■□□□□ 0.73
NPHP4-209ENST00000489180 CEP85LQ5SZL2 805 aa19.62■□□□□ 0.73
NPHP4-209ENST00000489180 FAM207AQ9NSI2 230 aaPredicted RBP19.62■□□□□ 0.73
NPHP4-209ENST00000489180 CTTNBP2NLQ9P2B4 639 aa19.62■□□□□ 0.73
NPHP4-209ENST00000489180 MAP3K9P80192 1104 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms