RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 MROH7-TTC4A0A0A0MT08 1334 aa8.07□□□□□ -1.12
PTCH1-211ENST00000488809 CDK5RAP2Q96SN8 1893 aa8.07□□□□□ -1.12
PTCH1-211ENST00000488809 UNC80Q8N2C7 3258 aa8.07□□□□□ -1.12
PTCH1-211ENST00000488809 DDTLA6NHG4 134 aaPredicted RBP8.07□□□□□ -1.12
PTCH1-211ENST00000488809 USP17L5A8MUK1 530 aa8.07□□□□□ -1.12
PTCH1-211ENST00000488809 NPM3O75607 178 aaKnown RBP8.07□□□□□ -1.12
PTCH1-211ENST00000488809 LDHCP07864 332 aa8.07□□□□□ -1.12
PTCH1-211ENST00000488809 UBTFL1P0CB47 393 aaPredicted RBP8.07□□□□□ -1.12
PTCH1-211ENST00000488809 SYN1P17600 705 aa8.07□□□□□ -1.12
PTCH1-211ENST00000488809 IL15P40933 162 aaPredicted RBP8.07□□□□□ -1.12
PTCH1-211ENST00000488809 MAGEA10P43363 369 aaPredicted RBP8.07□□□□□ -1.12
PTCH1-211ENST00000488809 RFX5P48382 616 aaPredicted RBP8.07□□□□□ -1.12
PTCH1-211ENST00000488809 IRX3P78415 501 aaPredicted RBP8.07□□□□□ -1.12
PTCH1-211ENST00000488809 GSTO1P78417 241 aa8.07□□□□□ -1.12
PTCH1-211ENST00000488809 SPP2Q13103 211 aa8.07□□□□□ -1.12
PTCH1-211ENST00000488809 TREML2Q5T2D2 321 aa8.07□□□□□ -1.12
PTCH1-211ENST00000488809 ERICH6Q7L0X2 663 aa8.07□□□□□ -1.12
PTCH1-211ENST00000488809 ATG9AQ7Z3C6 839 aa8.07□□□□□ -1.12
PTCH1-211ENST00000488809 ZFPM1Q8IX07 1006 aa8.07□□□□□ -1.12
PTCH1-211ENST00000488809 CCAR1Q8IX12 1150 aaKnown RBP8.07□□□□□ -1.12
PTCH1-211ENST00000488809 GTF3C2Q8WUA4 911 aaPredicted RBP8.07□□□□□ -1.12
PTCH1-211ENST00000488809 NUDT12Q9BQG2 462 aa8.07□□□□□ -1.12
PTCH1-211ENST00000488809 USP44Q9H0E7 712 aa8.07□□□□□ -1.12
PTCH1-211ENST00000488809 SIL1Q9H173 461 aa8.07□□□□□ -1.12
PTCH1-211ENST00000488809 OGDHLQ9ULD0 1010 aa8.07□□□□□ -1.12
PTCH1-211ENST00000488809 ANP32CO43423 234 aa8.06□□□□□ -1.12
PTCH1-211ENST00000488809 XRCC5P13010 732 aaKnown RBP8.06□□□□□ -1.12
PTCH1-211ENST00000488809 ZKSCAN1P17029 563 aaPredicted RBP8.06□□□□□ -1.12
PTCH1-211ENST00000488809 PHKA1P46020 1223 aa8.06□□□□□ -1.12
PTCH1-211ENST00000488809 HMGCS2P54868 508 aa8.06□□□□□ -1.12
PTCH1-211ENST00000488809 CCDC102BQ68D86 513 aa8.06□□□□□ -1.12
PTCH1-211ENST00000488809 Q7L0L9 218 aa8.06□□□□□ -1.12
PTCH1-211ENST00000488809 SH3BP5LQ7L8J4 393 aa8.06□□□□□ -1.12
PTCH1-211ENST00000488809 MRPL50Q8N5N7 158 aaKnown RBP8.06□□□□□ -1.12
PTCH1-211ENST00000488809 NOL10Q9BSC4 688 aaKnown RBP8.06□□□□□ -1.12
PTCH1-211ENST00000488809 ASCC2Q9H1I8 757 aaPredicted RBP8.06□□□□□ -1.12
PTCH1-211ENST00000488809 CWC22Q9HCG8 908 aaKnown RBP8.06□□□□□ -1.12
PTCH1-211ENST00000488809 DDX4Q9NQI0 724 aaKnown RBP8.06□□□□□ -1.12
PTCH1-211ENST00000488809 MTMR10Q9NXD2 777 aa8.06□□□□□ -1.12
PTCH1-211ENST00000488809 TMOD4Q9NZQ9 345 aa8.06□□□□□ -1.12
PTCH1-211ENST00000488809 MORF4L1Q9UBU8 362 aa8.06□□□□□ -1.12
PTCH1-211ENST00000488809 HERC5Q9UII4 1024 aaKnown RBP8.06□□□□□ -1.12
PTCH1-211ENST00000488809 AKAP2Q9Y2D5 859 aa8.06□□□□□ -1.12
PTCH1-211ENST00000488809 GPR75-ASB3A0A0A6YYF3 556 aa8.05□□□□□ -1.12
PTCH1-211ENST00000488809 ASNSP08243 561 aa8.05□□□□□ -1.12
PTCH1-211ENST00000488809 PRKAR2AP13861 404 aaKnown RBP8.05□□□□□ -1.12
PTCH1-211ENST00000488809 CYP2B6P20813 491 aa8.05□□□□□ -1.12
PTCH1-211ENST00000488809 MAPK4P31152 587 aa8.05□□□□□ -1.12
PTCH1-211ENST00000488809 RASGRF1Q13972 1273 aa8.05□□□□□ -1.12
PTCH1-211ENST00000488809 MVPQ14764 893 aaKnown RBP8.05□□□□□ -1.12
PTCH1-211ENST00000488809 SH3D19Q5HYK7 790 aa8.05□□□□□ -1.12
PTCH1-211ENST00000488809 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.05□□□□□ -1.12
PTCH1-211ENST00000488809 GPRC5AQ8NFJ5 357 aa8.05□□□□□ -1.12
PTCH1-211ENST00000488809 TRIB2Q92519 343 aa8.05□□□□□ -1.12
PTCH1-211ENST00000488809 LBHD1Q9BQE6 289 aaPredicted RBP8.05□□□□□ -1.12
PTCH1-211ENST00000488809 TRIM34Q9BYJ4 488 aa8.05□□□□□ -1.12
PTCH1-211ENST00000488809 PRKAG2Q9UGJ0 569 aa8.05□□□□□ -1.12
PTCH1-211ENST00000488809 GJD2Q9UKL4 321 aa8.05□□□□□ -1.12
PTCH1-211ENST00000488809 DNAH12Q6ZR08 3092 aa8.05□□□□□ -1.12
PTCH1-211ENST00000488809 MYH1P12882 1939 aa8.05□□□□□ -1.12
PTCH1-211ENST00000488809 SIPA1L1O43166 1804 aa8.04□□□□□ -1.12
PTCH1-211ENST00000488809 C19orf81C9J6K1 198 aa8.04□□□□□ -1.12
PTCH1-211ENST00000488809 GLRX3O76003 335 aaKnown RBP8.04□□□□□ -1.12
PTCH1-211ENST00000488809 CAP2P40123 477 aa8.04□□□□□ -1.12
PTCH1-211ENST00000488809 RGS2P41220 211 aa8.04□□□□□ -1.12
PTCH1-211ENST00000488809 MECOMQ03112 1051 aa8.04□□□□□ -1.12
PTCH1-211ENST00000488809 ALDH1L2Q3SY69 923 aa8.04□□□□□ -1.12
PTCH1-211ENST00000488809 MAP3K21Q5TCX8 1036 aa8.04□□□□□ -1.12
PTCH1-211ENST00000488809 FAM109BQ6ICB4 259 aaPredicted RBP8.04□□□□□ -1.12
PTCH1-211ENST00000488809 CCDC84Q86UT8 332 aaPredicted RBP8.04□□□□□ -1.12
PTCH1-211ENST00000488809 DHX36Q9H2U1 1008 aaKnown RBP8.04□□□□□ -1.12
PTCH1-211ENST00000488809 GINM1Q9NU53 330 aa8.04□□□□□ -1.12
PTCH1-211ENST00000488809 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.04□□□□□ -1.12
PTCH1-211ENST00000488809 PI4KBQ9UBF8 816 aa8.04□□□□□ -1.12
PTCH1-211ENST00000488809 PFASO15067 1338 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 LTBP2Q14767 1821 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 A0A1B0GUL7 405 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 FAM196BA6NMK8 535 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 E9PSI1 815 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 MSCO60682 206 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 BAG3O95817 575 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 PLCG2P16885 1265 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 ADORA1P30542 326 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 HOXA7P31268 230 aaPredicted RBP8.03□□□□□ -1.12
PTCH1-211ENST00000488809 BACE1P56817 501 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 RHBDL3P58872 404 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 HERVK_113P62684 666 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 CCNA1P78396 465 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 TRIM32Q13049 653 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 MTMR2Q13614 643 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 GORABQ5T7V8 394 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 ZNF697Q5TEC3 545 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 ATF7IPQ6VMQ6 1270 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 TEX11Q8IYF3 940 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 SSH1Q8WYL5 1049 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 APBA2Q99767 749 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 WDR18Q9BV38 432 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 COL25A1Q9BXS0 654 aaPredicted RBP8.03□□□□□ -1.12
PTCH1-211ENST00000488809 COPRSQ9NQ92 184 aa8.03□□□□□ -1.12
PTCH1-211ENST00000488809 RAI14Q9P0K7 980 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms