RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 SMCR8Q8TEV9 937 aaPredicted RBP18.79■□□□□ 0.6
TRIM50-203ENST00000488217 DHX36Q9H2U1 1008 aaKnown RBP18.79■□□□□ 0.6
TRIM50-203ENST00000488217 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.79■□□□□ 0.6
TRIM50-203ENST00000488217 AGTPBP1Q9UPW5 1226 aa18.79■□□□□ 0.6
TRIM50-203ENST00000488217 IGSF3O75054 1194 aa18.78■□□□□ 0.6
TRIM50-203ENST00000488217 CYP2E1P05181 493 aaPredicted RBP18.78■□□□□ 0.6
TRIM50-203ENST00000488217 PLCG2P16885 1265 aa18.78■□□□□ 0.6
TRIM50-203ENST00000488217 RRP1BQ14684 758 aaKnown RBP18.78■□□□□ 0.6
TRIM50-203ENST00000488217 NKX2-3Q8TAU0 364 aa18.78■□□□□ 0.6
TRIM50-203ENST00000488217 TBC1D2Q9BYX2 928 aa18.78■□□□□ 0.6
TRIM50-203ENST00000488217 C1orf115Q9H7X2 142 aa18.78■□□□□ 0.6
TRIM50-203ENST00000488217 AATFQ9NY61 560 aaKnown RBP eCLIP18.78■□□□□ 0.6
TRIM50-203ENST00000488217 HERC5Q9UII4 1024 aaKnown RBP18.78■□□□□ 0.6
TRIM50-203ENST00000488217 GABRQQ9UN88 632 aa18.78■□□□□ 0.6
TRIM50-203ENST00000488217 USP17L5A8MUK1 530 aa18.77■□□□□ 0.6
TRIM50-203ENST00000488217 GJB1P08034 283 aa18.77■□□□□ 0.6
TRIM50-203ENST00000488217 UBXN2AP68543 259 aa18.77■□□□□ 0.6
TRIM50-203ENST00000488217 HABP4Q5JVS0 413 aaKnown RBP18.77■□□□□ 0.6
TRIM50-203ENST00000488217 TREML2Q5T2D2 321 aa18.77■□□□□ 0.6
TRIM50-203ENST00000488217 ITPRIPQ8IWB1 547 aa18.77■□□□□ 0.6
TRIM50-203ENST00000488217 TGFBRAP1Q8WUH2 860 aa18.77■□□□□ 0.6
TRIM50-203ENST00000488217 RLBP1P12271 317 aa18.76■□□□□ 0.59
TRIM50-203ENST00000488217 CCL5P13501 91 aa18.76■□□□□ 0.59
TRIM50-203ENST00000488217 FLT3LGP49771 235 aa18.76■□□□□ 0.59
TRIM50-203ENST00000488217 PROCA1Q8NCQ7 364 aaPredicted RBP18.76■□□□□ 0.59
TRIM50-203ENST00000488217 CCDC8Q9H0W5 538 aaPredicted RBP18.76■□□□□ 0.59
TRIM50-203ENST00000488217 RNF208Q9H0X6 261 aa18.76■□□□□ 0.59
TRIM50-203ENST00000488217 TNPO2O14787 897 aaKnown RBP18.75■□□□□ 0.59
TRIM50-203ENST00000488217 ADCY3O60266 1144 aa18.75■□□□□ 0.59
TRIM50-203ENST00000488217 ZAP70P43403 619 aa18.75■□□□□ 0.59
TRIM50-203ENST00000488217 GJA8P48165 433 aa18.75■□□□□ 0.59
TRIM50-203ENST00000488217 ADGRA1Q86SQ6 560 aa18.75■□□□□ 0.59
TRIM50-203ENST00000488217 ANKRD13CQ8N6S4 541 aa18.75■□□□□ 0.59
TRIM50-203ENST00000488217 SLAIN1Q8ND83 568 aa18.75■□□□□ 0.59
TRIM50-203ENST00000488217 EAF2Q96CJ1 260 aaPredicted RBP18.75■□□□□ 0.59
TRIM50-203ENST00000488217 PNMA3Q9UL41 463 aa18.75■□□□□ 0.59
TRIM50-203ENST00000488217 KIAA0100Q14667 2235 aaKnown RBP18.75■□□□□ 0.59
TRIM50-203ENST00000488217 PABPC4Q13310 644 aaKnown RBP eCLIP18.74■□□□□ 0.59
TRIM50-203ENST00000488217 METTL16Q86W50 562 aaKnown RBP18.74■□□□□ 0.59
TRIM50-203ENST00000488217 MAPKAPK5Q8IW41 473 aa18.74■□□□□ 0.59
TRIM50-203ENST00000488217 PXYLP1Q8TE99 480 aa18.74■□□□□ 0.59
TRIM50-203ENST00000488217 WDR18Q9BV38 432 aa18.74■□□□□ 0.59
TRIM50-203ENST00000488217 AS3MTQ9HBK9 375 aa18.74■□□□□ 0.59
TRIM50-203ENST00000488217 PIH1D3Q9NQM4 214 aaKnown RBP18.74■□□□□ 0.59
TRIM50-203ENST00000488217 DBNLQ9UJU6 430 aaKnown RBP18.74■□□□□ 0.59
TRIM50-203ENST00000488217 GCLCP48506 637 aaPredicted RBP18.73■□□□□ 0.59
TRIM50-203ENST00000488217 HMGCS2P54868 508 aa18.73■□□□□ 0.59
TRIM50-203ENST00000488217 IRF5Q13568 498 aa18.73■□□□□ 0.59
TRIM50-203ENST00000488217 SH3D19Q5HYK7 790 aa18.73■□□□□ 0.59
TRIM50-203ENST00000488217 DPF3Q92784 378 aa18.73■□□□□ 0.59
TRIM50-203ENST00000488217 COA7Q96BR5 231 aa18.73■□□□□ 0.59
TRIM50-203ENST00000488217 PALD1Q9ULE6 856 aa18.73■□□□□ 0.59
TRIM50-203ENST00000488217 H0YGN5 161 aa18.72■□□□□ 0.59
TRIM50-203ENST00000488217 ASNSP08243 561 aa18.72■□□□□ 0.59
TRIM50-203ENST00000488217 CYP7A1P22680 504 aa18.72■□□□□ 0.59
TRIM50-203ENST00000488217 FAM110CQ1W6H9 321 aa18.72■□□□□ 0.59
TRIM50-203ENST00000488217 DIEXFQ68CQ4 756 aaKnown RBP18.72■□□□□ 0.59
TRIM50-203ENST00000488217 SHISA4Q96DD7 197 aa18.72■□□□□ 0.59
TRIM50-203ENST00000488217 UNC93B1Q9H1C4 597 aa18.72■□□□□ 0.59
TRIM50-203ENST00000488217 AK9Q5TCS8 1911 aa18.72■□□□□ 0.59
TRIM50-203ENST00000488217 COL2A1P02458 1487 aaPredicted RBP18.71■□□□□ 0.59
TRIM50-203ENST00000488217 MYH2Q9UKX2 1941 aa18.71■□□□□ 0.59
TRIM50-203ENST00000488217 SGPL1O95470 568 aa18.71■□□□□ 0.59
TRIM50-203ENST00000488217 ELNP15502 786 aa18.71■□□□□ 0.59
TRIM50-203ENST00000488217 BACE1P56817 501 aa18.71■□□□□ 0.59
TRIM50-203ENST00000488217 DYNLL1P63167 89 aaKnown RBP18.71■□□□□ 0.59
TRIM50-203ENST00000488217 JAG1P78504 1218 aa18.71■□□□□ 0.59
TRIM50-203ENST00000488217 CEP85Q6P2H3 762 aa18.71■□□□□ 0.59
TRIM50-203ENST00000488217 CRACR2BQ8N4Y2 399 aaPredicted RBP18.71■□□□□ 0.59
TRIM50-203ENST00000488217 TRIM34Q9BYJ4 488 aa18.71■□□□□ 0.59
TRIM50-203ENST00000488217 ASCC2Q9H1I8 757 aaPredicted RBP18.71■□□□□ 0.59
TRIM50-203ENST00000488217 GINM1Q9NU53 330 aa18.71■□□□□ 0.59
TRIM50-203ENST00000488217 TLR7Q9NYK1 1049 aaKnown RBP18.71■□□□□ 0.59
TRIM50-203ENST00000488217 C19orf81C9J6K1 198 aa18.7■□□□□ 0.58
TRIM50-203ENST00000488217 IDH1O75874 414 aaKnown RBP18.7■□□□□ 0.58
TRIM50-203ENST00000488217 CAPN2P17655 700 aa18.7■□□□□ 0.58
TRIM50-203ENST00000488217 UBE2Q1Q7Z7E8 422 aa18.7■□□□□ 0.58
TRIM50-203ENST00000488217 PANK1Q8TE04 598 aa18.7■□□□□ 0.58
TRIM50-203ENST00000488217 U2AF1L4Q8WU68 220 aaKnown RBP18.7■□□□□ 0.58
TRIM50-203ENST00000488217 SAP30BPQ9UHR5 308 aaKnown RBP18.7■□□□□ 0.58
TRIM50-203ENST00000488217 COLQQ9Y215 455 aaPredicted RBP18.7■□□□□ 0.58
TRIM50-203ENST00000488217 FLT1P17948 1338 aa18.7■□□□□ 0.58
TRIM50-203ENST00000488217 TFRCP02786 760 aaKnown RBP18.69■□□□□ 0.58
TRIM50-203ENST00000488217 HOXA7P31268 230 aaPredicted RBP18.69■□□□□ 0.58
TRIM50-203ENST00000488217 ERC1Q8IUD2 1116 aa18.69■□□□□ 0.58
TRIM50-203ENST00000488217 P2RX7Q99572 595 aaKnown RBP18.69■□□□□ 0.58
TRIM50-203ENST00000488217 TMOD4Q9NZQ9 345 aa18.69■□□□□ 0.58
TRIM50-203ENST00000488217 GJD2Q9UKL4 321 aa18.69■□□□□ 0.58
TRIM50-203ENST00000488217 TAOK2Q9UL54 1235 aa18.69■□□□□ 0.58
TRIM50-203ENST00000488217 MYH13Q9UKX3 1938 aa18.68■□□□□ 0.58
TRIM50-203ENST00000488217 USP17L10C9JJH3 530 aa18.68■□□□□ 0.58
TRIM50-203ENST00000488217 INHAP05111 366 aa18.68■□□□□ 0.58
TRIM50-203ENST00000488217 HLA-DOAP06340 250 aa18.68■□□□□ 0.58
TRIM50-203ENST00000488217 MAP3K12Q12852 859 aa18.68■□□□□ 0.58
TRIM50-203ENST00000488217 MTMR2Q13614 643 aa18.68■□□□□ 0.58
TRIM50-203ENST00000488217 CERS3Q8IU89 383 aa18.68■□□□□ 0.58
TRIM50-203ENST00000488217 MAGEB6Q8N7X4 407 aa18.68■□□□□ 0.58
TRIM50-203ENST00000488217 DNAJC18Q9H819 358 aa18.68■□□□□ 0.58
TRIM50-203ENST00000488217 EXOC6BQ9Y2D4 811 aa18.68■□□□□ 0.58
TRIM50-203ENST00000488217 MS4A1P11836 297 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms