RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 STK35Q8TDR2 534 aa7.95□□□□□ -1.14
BRCA1-217ENST00000487825 OSBPL7Q9BZF2 842 aa7.95□□□□□ -1.14
BRCA1-217ENST00000487825 ACSS3Q9H6R3 686 aa7.95□□□□□ -1.14
BRCA1-217ENST00000487825 PIM2Q9P1W9 311 aa7.95□□□□□ -1.14
BRCA1-217ENST00000487825 PRKAG2Q9UGJ0 569 aa7.95□□□□□ -1.14
BRCA1-217ENST00000487825 LEMD3Q9Y2U8 911 aa7.95□□□□□ -1.14
BRCA1-217ENST00000487825 DAGLAQ9Y4D2 1042 aa7.95□□□□□ -1.14
BRCA1-217ENST00000487825 SETD1AO15047 1707 aaKnown RBP7.95□□□□□ -1.14
BRCA1-217ENST00000487825 KIAA1324LA8MWY0 1029 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-217ENST00000487825 ATP2B2Q01814 1243 aa7.94□□□□□ -1.14
BRCA1-217ENST00000487825 MAP7Q14244 749 aa7.94□□□□□ -1.14
BRCA1-217ENST00000487825 ALG1LQ6GMV1 187 aa7.94□□□□□ -1.14
BRCA1-217ENST00000487825 ZAR1Q86SH2 424 aa7.94□□□□□ -1.14
BRCA1-217ENST00000487825 SULF2Q8IWU5 870 aa7.94□□□□□ -1.14
BRCA1-217ENST00000487825 FBF1Q8TES7 1133 aa7.94□□□□□ -1.14
BRCA1-217ENST00000487825 ATP10AO60312 1499 aa7.94□□□□□ -1.14
BRCA1-217ENST00000487825 RAPGEF6Q8TEU7 1601 aa7.93□□□□□ -1.14
BRCA1-217ENST00000487825 PATL2C9JE40 543 aaKnown RBP7.93□□□□□ -1.14
BRCA1-217ENST00000487825 DYNC1LI2O43237 492 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-217ENST00000487825 FBXO24O75426 580 aa7.93□□□□□ -1.14
BRCA1-217ENST00000487825 P4HBP07237 508 aaKnown RBP7.93□□□□□ -1.14
BRCA1-217ENST00000487825 SLFN14P0C7P3 912 aa7.93□□□□□ -1.14
BRCA1-217ENST00000487825 TPTE2Q6XPS3 522 aa7.93□□□□□ -1.14
BRCA1-217ENST00000487825 PDZD3Q86UT5 571 aa7.93□□□□□ -1.14
BRCA1-217ENST00000487825 GSX1Q9H4S2 264 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-217ENST00000487825 ZNF335Q9H4Z2 1342 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-217ENST00000487825 REREQ9P2R6 1566 aa7.93□□□□□ -1.14
BRCA1-217ENST00000487825 FAM170BA6NMN3 283 aa7.92□□□□□ -1.14
BRCA1-217ENST00000487825 TMPRSS2O15393 492 aa7.92□□□□□ -1.14
BRCA1-217ENST00000487825 ADAMTS4O75173 837 aa7.92□□□□□ -1.14
BRCA1-217ENST00000487825 PDIA4P13667 645 aaKnown RBP7.92□□□□□ -1.14
BRCA1-217ENST00000487825 ARNTP27540 789 aa7.92□□□□□ -1.14
BRCA1-217ENST00000487825 GSTT1P30711 240 aa7.92□□□□□ -1.14
BRCA1-217ENST00000487825 MAP1SQ66K74 1059 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-217ENST00000487825 CBX8Q9HC52 389 aa7.92□□□□□ -1.14
BRCA1-217ENST00000487825 CRIM1Q9NZV1 1036 aa7.92□□□□□ -1.14
BRCA1-217ENST00000487825 ALKQ9UM73 1620 aa7.92□□□□□ -1.14
BRCA1-217ENST00000487825 MROH2AA6NES4 1674 aa7.92□□□□□ -1.14
BRCA1-217ENST00000487825 SRCAPQ6ZRS2 3230 aa7.91□□□□□ -1.14
BRCA1-217ENST00000487825 LDHBP07195 334 aaKnown RBP7.91□□□□□ -1.14
BRCA1-217ENST00000487825 SPINK2P20155 84 aa7.91□□□□□ -1.14
BRCA1-217ENST00000487825 NME2P22392 152 aa7.91□□□□□ -1.14
BRCA1-217ENST00000487825 ID3Q02535 119 aa7.91□□□□□ -1.14
BRCA1-217ENST00000487825 KIF4BQ2VIQ3 1234 aa7.91□□□□□ -1.14
BRCA1-217ENST00000487825 GATA6Q92908 595 aa7.91□□□□□ -1.14
BRCA1-217ENST00000487825 FANCD2OSQ96PS1 177 aa7.91□□□□□ -1.14
BRCA1-217ENST00000487825 PIDD1Q9HB75 910 aa7.91□□□□□ -1.14
BRCA1-217ENST00000487825 KRT82Q9NSB4 513 aa7.91□□□□□ -1.14
BRCA1-217ENST00000487825 SYNGAP1Q96PV0 1343 aa7.91□□□□□ -1.14
BRCA1-217ENST00000487825 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.91□□□□□ -1.14
BRCA1-217ENST00000487825 POLR1AO95602 1720 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-217ENST00000487825 MYO3AQ8NEV4 1616 aa7.9□□□□□ -1.14
BRCA1-217ENST00000487825 PLA2R1Q13018 1463 aa7.9□□□□□ -1.14
BRCA1-217ENST00000487825 TRAPPC8Q9Y2L5 1435 aa7.9□□□□□ -1.14
BRCA1-217ENST00000487825 MPRIPQ6WCQ1 1025 aa7.9□□□□□ -1.14
BRCA1-217ENST00000487825 DTX1Q86Y01 620 aa7.9□□□□□ -1.14
BRCA1-217ENST00000487825 NECAB3Q96P71 396 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-217ENST00000487825 METTL22Q9BUU2 404 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-217ENST00000487825 SRCIN1Q9C0H9 1055 aa7.9□□□□□ -1.14
BRCA1-217ENST00000487825 DISC1Q9NRI5 854 aa7.9□□□□□ -1.14
BRCA1-217ENST00000487825 SPG7Q9UQ90 795 aa7.9□□□□□ -1.14
BRCA1-217ENST00000487825 PCDHGC5Q9Y5F6 944 aa7.9□□□□□ -1.14
BRCA1-217ENST00000487825 DIP2CQ9Y2E4 1556 aa7.89□□□□□ -1.15
BRCA1-217ENST00000487825 CPS1P31327 1500 aa7.89□□□□□ -1.15
BRCA1-217ENST00000487825 ENC1O14682 589 aa7.89□□□□□ -1.15
BRCA1-217ENST00000487825 GIPC1O14908 333 aa7.89□□□□□ -1.15
BRCA1-217ENST00000487825 RNGTTO60942 597 aaKnown RBP7.89□□□□□ -1.15
BRCA1-217ENST00000487825 PAGE1O75459 146 aa7.89□□□□□ -1.15
BRCA1-217ENST00000487825 FOSL1P15407 271 aa7.89□□□□□ -1.15
BRCA1-217ENST00000487825 HNRNPUQ00839 825 aaKnown RBP eCLIP7.89□□□□□ -1.15
BRCA1-217ENST00000487825 TTLL4Q14679 1199 aa7.89□□□□□ -1.15
BRCA1-217ENST00000487825 DUSP27Q5VZP5 1158 aa7.89□□□□□ -1.15
BRCA1-217ENST00000487825 SEZ6L2Q6UXD5 910 aa7.89□□□□□ -1.15
BRCA1-217ENST00000487825 ZNF765Q7L2R6 523 aa7.89□□□□□ -1.15
BRCA1-217ENST00000487825 GPBAR1Q8TDU6 330 aa7.89□□□□□ -1.15
BRCA1-217ENST00000487825 ACSBG1Q96GR2 724 aa7.89□□□□□ -1.15
BRCA1-217ENST00000487825 EMILIN2Q9BXX0 1053 aa7.89□□□□□ -1.15
BRCA1-217ENST00000487825 ATXN3LQ9H3M9 355 aa7.89□□□□□ -1.15
BRCA1-217ENST00000487825 C1GALT1Q9NS00 363 aa7.89□□□□□ -1.15
BRCA1-217ENST00000487825 AGLP35573 1532 aa7.88□□□□□ -1.15
BRCA1-217ENST00000487825 TCOF1Q13428 1488 aaKnown RBP7.88□□□□□ -1.15
BRCA1-217ENST00000487825 CYP26A1O43174 497 aa7.88□□□□□ -1.15
BRCA1-217ENST00000487825 HCLS1P14317 486 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-217ENST00000487825 GP2P55259 537 aaKnown RBP7.88□□□□□ -1.15
BRCA1-217ENST00000487825 CPSF6Q16630 551 aaKnown RBP eCLIP7.88□□□□□ -1.15
BRCA1-217ENST00000487825 GRIN3AQ8TCU5 1115 aa7.88□□□□□ -1.15
BRCA1-217ENST00000487825 CEP44Q9C0F1 390 aa7.88□□□□□ -1.15
BRCA1-217ENST00000487825 C12orf49Q9H741 205 aa7.88□□□□□ -1.15
BRCA1-217ENST00000487825 LRRC4CQ9HCJ2 640 aa7.88□□□□□ -1.15
BRCA1-217ENST00000487825 KDM5CP41229 1560 aa7.88□□□□□ -1.15
BRCA1-217ENST00000487825 MYO5CQ9NQX4 1742 aa7.87□□□□□ -1.15
BRCA1-217ENST00000487825 WNT11O96014 354 aa7.87□□□□□ -1.15
BRCA1-217ENST00000487825 USP17L7P0C7H9 530 aa7.87□□□□□ -1.15
BRCA1-217ENST00000487825 BMP6P22004 513 aa7.87□□□□□ -1.15
BRCA1-217ENST00000487825 ZNF252P-AS1Q0IIN9 211 aa7.87□□□□□ -1.15
BRCA1-217ENST00000487825 CDK5R2Q13319 367 aa7.87□□□□□ -1.15
BRCA1-217ENST00000487825 SND1Q7KZF4 910 aaKnown RBP eCLIP7.87□□□□□ -1.15
BRCA1-217ENST00000487825 SMYD4Q8IYR2 804 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-217ENST00000487825 PSMG3-AS1Q96PY0 264 aa7.87□□□□□ -1.15
BRCA1-217ENST00000487825 RGS17Q9UGC6 210 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms