RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 ITIH2P19823 946 aa7.55□□□□□ -1.2
CCDC66-221ENST00000487739 FUT4P22083 530 aa7.55□□□□□ -1.2
CCDC66-221ENST00000487739 EIF4BP23588 611 aaKnown RBP7.55□□□□□ -1.2
CCDC66-221ENST00000487739 GNA15P30679 374 aa7.55□□□□□ -1.2
CCDC66-221ENST00000487739 FGD1P98174 961 aa7.55□□□□□ -1.2
CCDC66-221ENST00000487739 AOC3Q16853 763 aa7.55□□□□□ -1.2
CCDC66-221ENST00000487739 BIN1O00499 593 aa7.54□□□□□ -1.2
CCDC66-221ENST00000487739 PRPF40AO75400 957 aaKnown RBP7.54□□□□□ -1.2
CCDC66-221ENST00000487739 UBE3DQ7Z6J8 389 aa7.54□□□□□ -1.2
CCDC66-221ENST00000487739 ZNF507Q8TCN5 953 aa7.54□□□□□ -1.2
CCDC66-221ENST00000487739 HEXIM2Q96MH2 286 aaKnown RBP7.54□□□□□ -1.2
CCDC66-221ENST00000487739 TNKS2Q9H2K2 1166 aa7.54□□□□□ -1.2
CCDC66-221ENST00000487739 PLAGL2Q9UPG8 496 aa7.54□□□□□ -1.2
CCDC66-221ENST00000487739 KRTAP4-8A0A0G2JLE6 195 aa7.53□□□□□ -1.2
CCDC66-221ENST00000487739 PRAMEF27A3QJZ7 478 aa7.53□□□□□ -1.2
CCDC66-221ENST00000487739 IGF2BP3O00425 579 aaKnown RBP eCLIP7.53□□□□□ -1.2
CCDC66-221ENST00000487739 ARMCX6Q7L4S7 300 aa7.53□□□□□ -1.2
CCDC66-221ENST00000487739 HDXQ7Z353 690 aa7.53□□□□□ -1.2
CCDC66-221ENST00000487739 SNX11Q9Y5W9 270 aa7.53□□□□□ -1.2
CCDC66-221ENST00000487739 LRIG2O94898 1065 aa7.52□□□□□ -1.21
CCDC66-221ENST00000487739 PAPLNO95428 1278 aa7.52□□□□□ -1.21
CCDC66-221ENST00000487739 CD96P40200 585 aa7.52□□□□□ -1.21
CCDC66-221ENST00000487739 INPP5AQ14642 412 aa7.52□□□□□ -1.21
CCDC66-221ENST00000487739 ANGEL2Q5VTE6 544 aaKnown RBP7.52□□□□□ -1.21
CCDC66-221ENST00000487739 TTBK2Q6IQ55 1244 aa7.52□□□□□ -1.21
CCDC66-221ENST00000487739 LRFN4Q6PJG9 635 aa7.52□□□□□ -1.21
CCDC66-221ENST00000487739 FAM214BQ7L5A3 538 aa7.52□□□□□ -1.21
CCDC66-221ENST00000487739 GAL3ST3Q96A11 431 aa7.52□□□□□ -1.21
CCDC66-221ENST00000487739 RC3H2Q9HBD1 1191 aaKnown RBP7.52□□□□□ -1.21
CCDC66-221ENST00000487739 GNAT3A8MTJ3 354 aa7.51□□□□□ -1.21
CCDC66-221ENST00000487739 OGFOD2Q6N063 350 aa7.51□□□□□ -1.21
CCDC66-221ENST00000487739 CYFIP1Q7L576 1253 aa7.51□□□□□ -1.21
CCDC66-221ENST00000487739 PI4K2BQ8TCG2 481 aa7.51□□□□□ -1.21
CCDC66-221ENST00000487739 PLPPR2Q96GM1 343 aa7.51□□□□□ -1.21
CCDC66-221ENST00000487739 PRDM5Q9NQX1 630 aaPredicted RBP7.51□□□□□ -1.21
CCDC66-221ENST00000487739 RNASE1P07998 156 aaKnown RBP7.5□□□□□ -1.21
CCDC66-221ENST00000487739 LMNB1P20700 586 aa7.5□□□□□ -1.21
CCDC66-221ENST00000487739 RPS26P62854 115 aaKnown RBP7.5□□□□□ -1.21
CCDC66-221ENST00000487739 PTPN11Q06124 597 aaPredicted RBP7.5□□□□□ -1.21
CCDC66-221ENST00000487739 CCDC85BQ15834 202 aaPredicted RBP7.5□□□□□ -1.21
CCDC66-221ENST00000487739 WIPI1Q5MNZ9 446 aaPredicted RBP7.5□□□□□ -1.21
CCDC66-221ENST00000487739 ATG4DQ86TL0 474 aaPredicted RBP7.5□□□□□ -1.21
CCDC66-221ENST00000487739 SPACA3Q8IXA5 215 aa7.5□□□□□ -1.21
CCDC66-221ENST00000487739 ASB11Q8WXH4 323 aa7.5□□□□□ -1.21
CCDC66-221ENST00000487739 MBNL3Q9NUK0 354 aaKnown RBP7.5□□□□□ -1.21
CCDC66-221ENST00000487739 MAPK8IP1Q9UQF2 711 aa7.5□□□□□ -1.21
CCDC66-221ENST00000487739 SNCAIPQ9Y6H5 919 aa7.5□□□□□ -1.21
CCDC66-221ENST00000487739 BTBD11A6QL63 1104 aa7.49□□□□□ -1.21
CCDC66-221ENST00000487739 EOMESO95936 686 aa7.49□□□□□ -1.21
CCDC66-221ENST00000487739 CLCN7P51798 805 aa7.49□□□□□ -1.21
CCDC66-221ENST00000487739 EAPPQ56P03 285 aaPredicted RBP7.49□□□□□ -1.21
CCDC66-221ENST00000487739 SND1Q7KZF4 910 aaKnown RBP eCLIP7.49□□□□□ -1.21
CCDC66-221ENST00000487739 DUSP9Q99956 384 aaKnown RBP7.49□□□□□ -1.21
CCDC66-221ENST00000487739 KRTAP9-9Q9BYP9 154 aa7.49□□□□□ -1.21
CCDC66-221ENST00000487739 KRTAP9-4Q9BYQ2 154 aa7.49□□□□□ -1.21
CCDC66-221ENST00000487739 FOXQ1Q9C009 403 aa7.49□□□□□ -1.21
CCDC66-221ENST00000487739 WNT10AQ9GZT5 417 aa7.49□□□□□ -1.21
CCDC66-221ENST00000487739 ADAMTS6Q9UKP5 1117 aa7.49□□□□□ -1.21
CCDC66-221ENST00000487739 AK5Q9Y6K8 562 aa7.49□□□□□ -1.21
CCDC66-221ENST00000487739 ANKRD33BA6NCL7 494 aa7.48□□□□□ -1.21
CCDC66-221ENST00000487739 ETF1P62495 437 aaKnown RBP7.48□□□□□ -1.21
CCDC66-221ENST00000487739 IKZF1Q13422 519 aa7.48□□□□□ -1.21
CCDC66-221ENST00000487739 SLC23A3Q6PIS1 610 aa7.48□□□□□ -1.21
CCDC66-221ENST00000487739 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.48□□□□□ -1.21
CCDC66-221ENST00000487739 LRRN4CLQ8ND94 238 aa7.48□□□□□ -1.21
CCDC66-221ENST00000487739 FBRSQ9HAH7 460 aa7.48□□□□□ -1.21
CCDC66-221ENST00000487739 SLITRK5O94991 958 aa7.47□□□□□ -1.21
CCDC66-221ENST00000487739 CAP2P40123 477 aa7.47□□□□□ -1.21
CCDC66-221ENST00000487739 SLBPQ14493 270 aaKnown RBP eCLIP7.47□□□□□ -1.21
CCDC66-221ENST00000487739 NKPD1Q17RQ9 610 aa7.47□□□□□ -1.21
CCDC66-221ENST00000487739 HID1Q8IV36 788 aa7.47□□□□□ -1.21
CCDC66-221ENST00000487739 POU5F2Q8N7G0 328 aa7.47□□□□□ -1.21
CCDC66-221ENST00000487739 MFSD2AQ8NA29 543 aa7.47□□□□□ -1.21
CCDC66-221ENST00000487739 MIPEPQ99797 713 aa7.47□□□□□ -1.21
CCDC66-221ENST00000487739 TPX2Q9ULW0 747 aaKnown RBP7.47□□□□□ -1.21
CCDC66-221ENST00000487739 LIG3P49916 1009 aa7.45□□□□□ -1.22
CCDC66-221ENST00000487739 ZP2Q05996 745 aa7.45□□□□□ -1.22
CCDC66-221ENST00000487739 SEPT6Q14141 434 aa7.45□□□□□ -1.22
CCDC66-221ENST00000487739 NKG7Q16617 165 aa7.45□□□□□ -1.22
CCDC66-221ENST00000487739 SFRP5Q5T4F7 317 aa7.45□□□□□ -1.22
CCDC66-221ENST00000487739 ZNF746Q6NUN9 644 aaPredicted RBP7.45□□□□□ -1.22
CCDC66-221ENST00000487739 AGMOQ6ZNB7 445 aa7.45□□□□□ -1.22
CCDC66-221ENST00000487739 C22orf34Q6ZV56 151 aa7.45□□□□□ -1.22
CCDC66-221ENST00000487739 AEBP1Q8IUX7 1158 aa7.45□□□□□ -1.22
CCDC66-221ENST00000487739 FAM168AQ92567 244 aa7.45□□□□□ -1.22
CCDC66-221ENST00000487739 TACC3Q9Y6A5 838 aa7.45□□□□□ -1.22
CCDC66-221ENST00000487739 PITPNM2Q9BZ72 1349 aa7.45□□□□□ -1.22
CCDC66-221ENST00000487739 FAM155AB1AL88 458 aaPredicted RBP7.44□□□□□ -1.22
CCDC66-221ENST00000487739 GRK4P32298 578 aa7.44□□□□□ -1.22
CCDC66-221ENST00000487739 CDK8P49336 464 aa7.44□□□□□ -1.22
CCDC66-221ENST00000487739 MAP3K11Q16584 847 aa7.44□□□□□ -1.22
CCDC66-221ENST00000487739 MFSD4AQ8N468 514 aa7.44□□□□□ -1.22
CCDC66-221ENST00000487739 MIR1-1HGQ9H1L0 117 aa7.44□□□□□ -1.22
CCDC66-221ENST00000487739 RNF19AQ9NV58 838 aa7.44□□□□□ -1.22
CCDC66-221ENST00000487739 PCDHB5Q9Y5E4 795 aa7.44□□□□□ -1.22
CCDC66-221ENST00000487739 CARMIL2Q6F5E8 1435 aa7.44□□□□□ -1.22
CCDC66-221ENST00000487739 CST3P01034 146 aaPredicted RBP7.43□□□□□ -1.22
CCDC66-221ENST00000487739 ZNF865P0CJ78 1059 aaPredicted RBP7.43□□□□□ -1.22
CCDC66-221ENST00000487739 RLBP1P12271 317 aa7.43□□□□□ -1.22
CCDC66-221ENST00000487739 MEI1Q5TIA1 1274 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms