RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 SOS1Q07889 1333 aaPredicted RBP8.45□□□□□ -1.06
SEC22C-215ENST00000487701 NRXN2Q9P2S2 1712 aa8.45□□□□□ -1.06
SEC22C-215ENST00000487701 N4BP2Q86UW6 1770 aaPredicted RBP8.45□□□□□ -1.06
SEC22C-215ENST00000487701 UTRNP46939 3433 aa8.44□□□□□ -1.06
SEC22C-215ENST00000487701 NEURL1BA8MQ27 555 aa8.44□□□□□ -1.06
SEC22C-215ENST00000487701 ARAFP10398 606 aa8.44□□□□□ -1.06
SEC22C-215ENST00000487701 AMPD1P23109 780 aa8.44□□□□□ -1.06
SEC22C-215ENST00000487701 LMOD3Q0VAK6 560 aa8.44□□□□□ -1.06
SEC22C-215ENST00000487701 SLCO4C1Q6ZQN7 724 aa8.44□□□□□ -1.06
SEC22C-215ENST00000487701 PODNQ7Z5L7 613 aa8.44□□□□□ -1.06
SEC22C-215ENST00000487701 SUSD3Q96L08 255 aa8.44□□□□□ -1.06
SEC22C-215ENST00000487701 CEP63Q96MT8 703 aa8.44□□□□□ -1.06
SEC22C-215ENST00000487701 HCN2Q9UL51 889 aa8.44□□□□□ -1.06
SEC22C-215ENST00000487701 RTCBQ9Y3I0 505 aaKnown RBP8.44□□□□□ -1.06
SEC22C-215ENST00000487701 COL15A1P39059 1388 aa8.44□□□□□ -1.06
SEC22C-215ENST00000487701 ANKRD31Q8N7Z5 1873 aa8.43□□□□□ -1.06
SEC22C-215ENST00000487701 CACNA1FO60840 1977 aa8.43□□□□□ -1.06
SEC22C-215ENST00000487701 SHISA8B8ZZ34 492 aa8.43□□□□□ -1.06
SEC22C-215ENST00000487701 EFSO43281 561 aa8.43□□□□□ -1.06
SEC22C-215ENST00000487701 A1BGP04217 495 aa8.43□□□□□ -1.06
SEC22C-215ENST00000487701 ADH6P28332 368 aa8.43□□□□□ -1.06
SEC22C-215ENST00000487701 EIF4A1P60842 406 aaKnown RBP8.43□□□□□ -1.06
SEC22C-215ENST00000487701 LAMC2Q13753 1193 aa8.43□□□□□ -1.06
SEC22C-215ENST00000487701 TRAPPC3LQ5T215 181 aa8.43□□□□□ -1.06
SEC22C-215ENST00000487701 C7orf43Q8WVR3 580 aa8.43□□□□□ -1.06
SEC22C-215ENST00000487701 EDARADDQ8WWZ3 215 aa8.43□□□□□ -1.06
SEC22C-215ENST00000487701 SRP68Q9UHB9 627 aaKnown RBP8.43□□□□□ -1.06
SEC22C-215ENST00000487701 USP16Q9Y5T5 823 aa8.43□□□□□ -1.06
SEC22C-215ENST00000487701 ANKRD36CQ5JPF3 1778 aa8.43□□□□□ -1.06
SEC22C-215ENST00000487701 CHD4Q14839 1912 aa8.42□□□□□ -1.06
SEC22C-215ENST00000487701 STARD3NLO95772 234 aa8.42□□□□□ -1.06
SEC22C-215ENST00000487701 SNRPA1P09661 255 aaKnown RBP8.42□□□□□ -1.06
SEC22C-215ENST00000487701 GYS1P13807 737 aa8.42□□□□□ -1.06
SEC22C-215ENST00000487701 CANXP27824 592 aaKnown RBP8.42□□□□□ -1.06
SEC22C-215ENST00000487701 PIP4K2AP48426 406 aaPredicted RBP8.42□□□□□ -1.06
SEC22C-215ENST00000487701 EIF5P55010 431 aaKnown RBP8.42□□□□□ -1.06
SEC22C-215ENST00000487701 PCBP4P57723 403 aaKnown RBP8.42□□□□□ -1.06
SEC22C-215ENST00000487701 HIF1AQ16665 826 aa8.42□□□□□ -1.06
SEC22C-215ENST00000487701 RTN1Q16799 776 aa8.42□□□□□ -1.06
SEC22C-215ENST00000487701 C1orf229Q6ZS94 237 aaPredicted RBP8.42□□□□□ -1.06
SEC22C-215ENST00000487701 ZNF280CQ8ND82 737 aa8.42□□□□□ -1.06
SEC22C-215ENST00000487701 RRAGCQ9HB90 399 aa8.42□□□□□ -1.06
SEC22C-215ENST00000487701 BRD7Q9NPI1 651 aa8.42□□□□□ -1.06
SEC22C-215ENST00000487701 PPP1R1BQ9UD71 204 aaPredicted RBP8.42□□□□□ -1.06
SEC22C-215ENST00000487701 TSPYL4Q9UJ04 414 aa8.42□□□□□ -1.06
SEC22C-215ENST00000487701 ZMIZ1Q9ULJ6 1067 aa8.42□□□□□ -1.06
SEC22C-215ENST00000487701 USP42Q9H9J4 1324 aaKnown RBP8.42□□□□□ -1.06
SEC22C-215ENST00000487701 DLEC1Q9Y238 1755 aa8.42□□□□□ -1.06
SEC22C-215ENST00000487701 CACNA1SQ13698 1873 aa8.41□□□□□ -1.06
SEC22C-215ENST00000487701 CHL1O00533 1208 aa8.41□□□□□ -1.06
SEC22C-215ENST00000487701 IGHA1P01876 353 aa8.41□□□□□ -1.06
SEC22C-215ENST00000487701 POLD1P28340 1107 aa8.41□□□□□ -1.06
SEC22C-215ENST00000487701 WEE1P30291 646 aa8.41□□□□□ -1.06
SEC22C-215ENST00000487701 RFC4P35249 363 aa8.41□□□□□ -1.06
SEC22C-215ENST00000487701 SFSWAPQ12872 951 aaKnown RBP8.41□□□□□ -1.06
SEC22C-215ENST00000487701 GPAT2Q6NUI2 795 aa8.41□□□□□ -1.06
SEC22C-215ENST00000487701 STK32AQ8WU08 396 aa8.41□□□□□ -1.06
SEC22C-215ENST00000487701 TEX13AQ9BXU3 409 aaPredicted RBP8.41□□□□□ -1.06
SEC22C-215ENST00000487701 PHF20L1A8MW92 1017 aa8.4□□□□□ -1.06
SEC22C-215ENST00000487701 MMP10P09238 476 aa8.4□□□□□ -1.06
SEC22C-215ENST00000487701 ZNF853P0CG23 659 aa8.4□□□□□ -1.06
SEC22C-215ENST00000487701 TYRO3Q06418 890 aa8.4□□□□□ -1.06
SEC22C-215ENST00000487701 SWI5Q1ZZU3 235 aa8.4□□□□□ -1.06
SEC22C-215ENST00000487701 KRT24Q2M2I5 525 aa8.4□□□□□ -1.06
SEC22C-215ENST00000487701 ZNF468Q5VIY5 522 aaPredicted RBP8.4□□□□□ -1.06
SEC22C-215ENST00000487701 FAM9BQ8IZU0 186 aa8.4□□□□□ -1.06
SEC22C-215ENST00000487701 CCDC82Q8N4S0 544 aa8.4□□□□□ -1.06
SEC22C-215ENST00000487701 PBXIP1Q96AQ6 731 aa8.4□□□□□ -1.06
SEC22C-215ENST00000487701 PRIMPOLQ96LW4 560 aa8.4□□□□□ -1.06
SEC22C-215ENST00000487701 BABAM1Q9NWV8 329 aa8.4□□□□□ -1.06
SEC22C-215ENST00000487701 ARFGEF2Q9Y6D5 1785 aa8.4□□□□□ -1.07
SEC22C-215ENST00000487701 COL11A2P13942 1736 aaPredicted RBP8.4□□□□□ -1.07
SEC22C-215ENST00000487701 C10orf71Q711Q0 1435 aa8.39□□□□□ -1.07
SEC22C-215ENST00000487701 CNTNAP5Q8WYK1 1306 aa8.39□□□□□ -1.07
SEC22C-215ENST00000487701 ARFGEF1Q9Y6D6 1849 aa8.39□□□□□ -1.07
SEC22C-215ENST00000487701 PRMT3O60678 531 aa8.39□□□□□ -1.07
SEC22C-215ENST00000487701 EPXP11678 715 aa8.39□□□□□ -1.07
SEC22C-215ENST00000487701 IL6STP40189 918 aaPredicted RBP8.39□□□□□ -1.07
SEC22C-215ENST00000487701 DDR1Q08345 913 aa8.39□□□□□ -1.07
SEC22C-215ENST00000487701 ELOAQ14241 798 aaKnown RBP8.39□□□□□ -1.07
SEC22C-215ENST00000487701 GRIN2CQ14957 1233 aa8.39□□□□□ -1.07
SEC22C-215ENST00000487701 USPL1Q5W0Q7 1092 aa8.39□□□□□ -1.07
SEC22C-215ENST00000487701 BTLAQ7Z6A9 289 aa8.39□□□□□ -1.07
SEC22C-215ENST00000487701 BEND7Q8N7W2 519 aaPredicted RBP8.39□□□□□ -1.07
SEC22C-215ENST00000487701 SYT17Q9BSW7 474 aa8.39□□□□□ -1.07
SEC22C-215ENST00000487701 AVENQ9NQS1 362 aaPredicted RBP8.39□□□□□ -1.07
SEC22C-215ENST00000487701 NARFQ9UHQ1 456 aa8.39□□□□□ -1.07
SEC22C-215ENST00000487701 LAS1LQ9Y4W2 734 aaKnown RBP8.39□□□□□ -1.07
SEC22C-215ENST00000487701 ATG7O95352 703 aa8.38□□□□□ -1.07
SEC22C-215ENST00000487701 CCDC27Q2M243 656 aa8.38□□□□□ -1.07
SEC22C-215ENST00000487701 DIEXFQ68CQ4 756 aaKnown RBP8.38□□□□□ -1.07
SEC22C-215ENST00000487701 RAB44Q7Z6P3 723 aaPredicted RBP8.38□□□□□ -1.07
SEC22C-215ENST00000487701 SYT9Q86SS6 491 aa8.38□□□□□ -1.07
SEC22C-215ENST00000487701 NLGN2Q8NFZ4 835 aa8.38□□□□□ -1.07
SEC22C-215ENST00000487701 IFT57Q9NWB7 429 aa8.38□□□□□ -1.07
SEC22C-215ENST00000487701 KLK14Q9P0G3 267 aa8.38□□□□□ -1.07
SEC22C-215ENST00000487701 KCNH4Q9UQ05 1017 aa8.38□□□□□ -1.07
SEC22C-215ENST00000487701 CCER2I3L3R5 266 aa8.37□□□□□ -1.07
SEC22C-215ENST00000487701 CAMTA2O94983 1202 aa8.37□□□□□ -1.07
SEC22C-215ENST00000487701 SNRPNP63162 240 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms