RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 AMOTL1Q8IY63 956 aa11.38□□□□□ -0.59
MCF2L-227ENST00000486806 ZNF526Q8TF50 670 aaPredicted RBP11.38□□□□□ -0.59
MCF2L-227ENST00000486806 CSRNP1Q96S65 589 aa11.38□□□□□ -0.59
MCF2L-227ENST00000486806 KIF2CQ99661 725 aa11.38□□□□□ -0.59
MCF2L-227ENST00000486806 TAOK2Q9UL54 1235 aa11.38□□□□□ -0.59
MCF2L-227ENST00000486806 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.38□□□□□ -0.59
MCF2L-227ENST00000486806 NEDD4P46934 1319 aa11.37□□□□□ -0.59
MCF2L-227ENST00000486806 BAZ2AQ9UIF9 1905 aaKnown RBP11.37□□□□□ -0.59
MCF2L-227ENST00000486806 ADM5C9JUS6 153 aa11.37□□□□□ -0.59
MCF2L-227ENST00000486806 E7EWF7 191 aa11.37□□□□□ -0.59
MCF2L-227ENST00000486806 PCP11498 1178 aaKnown RBP11.37□□□□□ -0.59
MCF2L-227ENST00000486806 ZKSCAN1P17029 563 aaPredicted RBP11.37□□□□□ -0.59
MCF2L-227ENST00000486806 MAP3K10Q02779 954 aa11.37□□□□□ -0.59
MCF2L-227ENST00000486806 CTDSPL2Q05D32 466 aa11.37□□□□□ -0.59
MCF2L-227ENST00000486806 AKNAD1Q5T1N1 836 aa11.37□□□□□ -0.59
MCF2L-227ENST00000486806 SULF1Q8IWU6 871 aa11.37□□□□□ -0.59
MCF2L-227ENST00000486806 DCPSQ96C86 337 aaKnown RBP11.37□□□□□ -0.59
MCF2L-227ENST00000486806 PI4KBQ9UBF8 816 aa11.37□□□□□ -0.59
MCF2L-227ENST00000486806 SERPINB13Q9UIV8 391 aa11.37□□□□□ -0.59
MCF2L-227ENST00000486806 ORC4O43929 436 aa11.36□□□□□ -0.59
MCF2L-227ENST00000486806 SHMT1P34896 483 aa11.36□□□□□ -0.59
MCF2L-227ENST00000486806 COL9A3Q14050 684 aaPredicted RBP11.36□□□□□ -0.59
MCF2L-227ENST00000486806 KRT32Q14532 448 aa11.36□□□□□ -0.59
MCF2L-227ENST00000486806 ADCK5Q3MIX3 580 aa11.36□□□□□ -0.59
MCF2L-227ENST00000486806 KRT26Q7Z3Y9 468 aa11.36□□□□□ -0.59
MCF2L-227ENST00000486806 ZSCAN29Q8IWY8 852 aaPredicted RBP11.36□□□□□ -0.59
MCF2L-227ENST00000486806 SLC44A5Q8NCS7 719 aa11.36□□□□□ -0.59
MCF2L-227ENST00000486806 NKX2-3Q8TAU0 364 aa11.36□□□□□ -0.59
MCF2L-227ENST00000486806 DYNLL2Q96FJ2 89 aa11.36□□□□□ -0.59
MCF2L-227ENST00000486806 RNF41Q9H4P4 317 aaPredicted RBP11.36□□□□□ -0.59
MCF2L-227ENST00000486806 SWAP70Q9UH65 585 aa11.36□□□□□ -0.59
MCF2L-227ENST00000486806 HERC5Q9UII4 1024 aaKnown RBP11.36□□□□□ -0.59
MCF2L-227ENST00000486806 MYH1P12882 1939 aa11.35□□□□□ -0.59
MCF2L-227ENST00000486806 KIF3CO14782 793 aa11.35□□□□□ -0.59
MCF2L-227ENST00000486806 TBC1D12O60347 775 aa11.35□□□□□ -0.59
MCF2L-227ENST00000486806 SLC3A2P08195 630 aaKnown RBP11.35□□□□□ -0.59
MCF2L-227ENST00000486806 SLURP2P0DP57 97 aa11.35□□□□□ -0.59
MCF2L-227ENST00000486806 CDK8P49336 464 aa11.35□□□□□ -0.59
MCF2L-227ENST00000486806 NT5C2P49902 561 aa11.35□□□□□ -0.59
MCF2L-227ENST00000486806 NBPF12Q5TAG4 269 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-227ENST00000486806 MAP1SQ66K74 1059 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-227ENST00000486806 TATDN1Q6P1N9 297 aa11.35□□□□□ -0.59
MCF2L-227ENST00000486806 FOXP4Q8IVH2 680 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-227ENST00000486806 MB21D2Q8IYB1 491 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-227ENST00000486806 GLIS2Q9BZE0 524 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-227ENST00000486806 TM6SF1Q9BZW5 370 aa11.35□□□□□ -0.59
MCF2L-227ENST00000486806 GPBP1L1Q9HC44 474 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-227ENST00000486806 PLIN4Q96Q06 1357 aa11.35□□□□□ -0.59
MCF2L-227ENST00000486806 FAM196BA6NMK8 535 aa11.34□□□□□ -0.59
MCF2L-227ENST00000486806 PRDM1O75626 825 aa11.34□□□□□ -0.59
MCF2L-227ENST00000486806 RASA1P20936 1047 aa11.34□□□□□ -0.59
MCF2L-227ENST00000486806 PDE4BQ07343 736 aa11.34□□□□□ -0.59
MCF2L-227ENST00000486806 PRAMEF18Q5VWM3 479 aa11.34□□□□□ -0.59
MCF2L-227ENST00000486806 DLK2Q6UY11 383 aa11.34□□□□□ -0.59
MCF2L-227ENST00000486806 MFSD6Q6ZSS7 791 aa11.34□□□□□ -0.59
MCF2L-227ENST00000486806 CDC37L1Q7L3B6 337 aa11.34□□□□□ -0.59
MCF2L-227ENST00000486806 USP48Q86UV5 1035 aa11.34□□□□□ -0.59
MCF2L-227ENST00000486806 CDCA5Q96FF9 252 aa11.34□□□□□ -0.59
MCF2L-227ENST00000486806 JAKMIP1Q96N16 626 aaKnown RBP11.34□□□□□ -0.59
MCF2L-227ENST00000486806 CNNM2Q9H8M5 875 aa11.34□□□□□ -0.59
MCF2L-227ENST00000486806 INCENPQ9NQS7 918 aa11.34□□□□□ -0.59
MCF2L-227ENST00000486806 PAPPA2Q9BXP8 1791 aa11.33□□□□□ -0.59
MCF2L-227ENST00000486806 B4E1Z4 1266 aa11.33□□□□□ -0.6
MCF2L-227ENST00000486806 YY1P25490 414 aa11.33□□□□□ -0.6
MCF2L-227ENST00000486806 ANTXR2P58335 489 aa11.33□□□□□ -0.6
MCF2L-227ENST00000486806 STK11IPQ8N1F8 1099 aa11.33□□□□□ -0.6
MCF2L-227ENST00000486806 CRACR2BQ8N4Y2 399 aaPredicted RBP11.33□□□□□ -0.6
MCF2L-227ENST00000486806 NCOA7Q8NI08 942 aa11.33□□□□□ -0.6
MCF2L-227ENST00000486806 HOOK2Q96ED9 719 aa11.33□□□□□ -0.6
MCF2L-227ENST00000486806 NEK1Q96PY6 1258 aa11.33□□□□□ -0.6
MCF2L-227ENST00000486806 KRT23Q9C075 422 aa11.33□□□□□ -0.6
MCF2L-227ENST00000486806 ZNF287Q9HBT7 754 aa11.33□□□□□ -0.6
MCF2L-227ENST00000486806 ZSWIM6Q9HCJ5 1215 aa11.33□□□□□ -0.6
MCF2L-227ENST00000486806 CLEC11AQ9Y240 323 aa11.33□□□□□ -0.6
MCF2L-227ENST00000486806 WDR19Q8NEZ3 1342 aa11.33□□□□□ -0.6
MCF2L-227ENST00000486806 PHF20L1A8MW92 1017 aa11.32□□□□□ -0.6
MCF2L-227ENST00000486806 KDM4AO75164 1064 aa11.32□□□□□ -0.6
MCF2L-227ENST00000486806 HMGB1P09429 215 aaKnown RBP11.32□□□□□ -0.6
MCF2L-227ENST00000486806 CASTP20810 708 aaKnown RBP11.32□□□□□ -0.6
MCF2L-227ENST00000486806 PSMA5P28066 241 aa11.32□□□□□ -0.6
MCF2L-227ENST00000486806 TRDNQ13061 729 aa11.32□□□□□ -0.6
MCF2L-227ENST00000486806 RRP1BQ14684 758 aaKnown RBP11.32□□□□□ -0.6
MCF2L-227ENST00000486806 SUPT20HL1Q3ZLR7 823 aa11.32□□□□□ -0.6
MCF2L-227ENST00000486806 DCAF15Q66K64 600 aa11.32□□□□□ -0.6
MCF2L-227ENST00000486806 CHADLQ6NUI6 762 aa11.32□□□□□ -0.6
MCF2L-227ENST00000486806 MIGA2Q7L4E1 593 aa11.32□□□□□ -0.6
MCF2L-227ENST00000486806 RALYLQ86SE5 291 aaKnown RBP11.32□□□□□ -0.6
MCF2L-227ENST00000486806 ZNF784Q8NCA9 323 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-227ENST00000486806 ESR2Q92731 530 aa11.32□□□□□ -0.6
MCF2L-227ENST00000486806 UPF3BQ9BZI7 483 aaKnown RBP11.32□□□□□ -0.6
MCF2L-227ENST00000486806 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.32□□□□□ -0.6
MCF2L-227ENST00000486806 MKNK2Q9HBH9 465 aa11.32□□□□□ -0.6
MCF2L-227ENST00000486806 ZNF112Q9UJU3 913 aa11.32□□□□□ -0.6
MCF2L-227ENST00000486806 GREB1LQ9C091 1923 aaPredicted RBP11.31□□□□□ -0.6
MCF2L-227ENST00000486806 IGKV6D-41A0A0C4DH26 115 aa11.31□□□□□ -0.6
MCF2L-227ENST00000486806 TRAF5O00463 557 aa11.31□□□□□ -0.6
MCF2L-227ENST00000486806 ITGBL1O95965 494 aaPredicted RBP11.31□□□□□ -0.6
MCF2L-227ENST00000486806 CPA1P15085 419 aa11.31□□□□□ -0.6
MCF2L-227ENST00000486806 AKR1B1P15121 316 aa11.31□□□□□ -0.6
MCF2L-227ENST00000486806 RPS6KB1P23443 525 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms