RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 B4E1Z4 1266 aa15.63■□□□□ 0.09
VTI1BP1-201ENST00000486325 KDM4AO75164 1064 aa15.63■□□□□ 0.09
VTI1BP1-201ENST00000486325 CYP2D6P10635 497 aa15.63■□□□□ 0.09
VTI1BP1-201ENST00000486325 PLCD1P51178 756 aa15.63■□□□□ 0.09
VTI1BP1-201ENST00000486325 NFIAQ12857 509 aa15.63■□□□□ 0.09
VTI1BP1-201ENST00000486325 RRP12Q5JTH9 1297 aaKnown RBP15.63■□□□□ 0.09
VTI1BP1-201ENST00000486325 RBM26Q5T8P6 1007 aaKnown RBP15.63■□□□□ 0.09
VTI1BP1-201ENST00000486325 C16orf86Q6ZW13 317 aa15.63■□□□□ 0.09
VTI1BP1-201ENST00000486325 AGXT2Q9BYV1 514 aa15.63■□□□□ 0.09
VTI1BP1-201ENST00000486325 EHD4Q9H223 541 aa15.63■□□□□ 0.09
VTI1BP1-201ENST00000486325 SH2B1Q9NRF2 756 aaPredicted RBP15.63■□□□□ 0.09
VTI1BP1-201ENST00000486325 FAM198AQ9UFP1 575 aa15.63■□□□□ 0.09
VTI1BP1-201ENST00000486325 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.63■□□□□ 0.09
VTI1BP1-201ENST00000486325 RANBP6O60518 1105 aaKnown RBP15.62■□□□□ 0.09
VTI1BP1-201ENST00000486325 DDNO94850 711 aaPredicted RBP15.62■□□□□ 0.09
VTI1BP1-201ENST00000486325 CD2BP2O95400 341 aaKnown RBP15.62■□□□□ 0.09
VTI1BP1-201ENST00000486325 CDK8P49336 464 aa15.62■□□□□ 0.09
VTI1BP1-201ENST00000486325 TCP10Q12799 353 aa15.62■□□□□ 0.09
VTI1BP1-201ENST00000486325 KIF4BQ2VIQ3 1234 aa15.62■□□□□ 0.09
VTI1BP1-201ENST00000486325 NBPF9Q3BBW0 867 aa15.62■□□□□ 0.09
VTI1BP1-201ENST00000486325 IQCA1Q86XH1 822 aa15.62■□□□□ 0.09
VTI1BP1-201ENST00000486325 ZSCAN29Q8IWY8 852 aaPredicted RBP15.62■□□□□ 0.09
VTI1BP1-201ENST00000486325 INCENPQ9NQS7 918 aa15.62■□□□□ 0.09
VTI1BP1-201ENST00000486325 SERPINB13Q9UIV8 391 aa15.62■□□□□ 0.09
VTI1BP1-201ENST00000486325 NEDD4P46934 1319 aa15.62■□□□□ 0.09
VTI1BP1-201ENST00000486325 LAMA4Q16363 1823 aa15.61■□□□□ 0.09
VTI1BP1-201ENST00000486325 HSP90AA1P07900 732 aaKnown RBP15.61■□□□□ 0.09
VTI1BP1-201ENST00000486325 LIFRP42702 1097 aa15.61■□□□□ 0.09
VTI1BP1-201ENST00000486325 CACNB3P54284 484 aa15.61■□□□□ 0.09
VTI1BP1-201ENST00000486325 SAMD7Q7Z3H4 446 aa15.61■□□□□ 0.09
VTI1BP1-201ENST00000486325 STK11IPQ8N1F8 1099 aa15.61■□□□□ 0.09
VTI1BP1-201ENST00000486325 TMX3Q96JJ7 454 aa15.61■□□□□ 0.09
VTI1BP1-201ENST00000486325 UBAC1Q9BSL1 405 aa15.61■□□□□ 0.09
VTI1BP1-201ENST00000486325 TRIM34Q9BYJ4 488 aa15.61■□□□□ 0.09
VTI1BP1-201ENST00000486325 VEZTQ9HBM0 779 aa15.61■□□□□ 0.09
VTI1BP1-201ENST00000486325 ATRNL1Q5VV63 1379 aa15.61■□□□□ 0.09
VTI1BP1-201ENST00000486325 MYH1P12882 1939 aa15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 COL2A1P02458 1487 aaPredicted RBP15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 CLRN2A0PK11 232 aa15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 GLTPD2A6NH11 291 aa15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 TCP10L2B9ZVM9 353 aa15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 IFIT3O14879 490 aaKnown RBP15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 EVCP57679 992 aa15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 GABPAQ06546 454 aa15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 TOB2Q14106 344 aaPredicted RBP15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 TBC1D10BQ4KMP7 808 aaPredicted RBP15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 CYB5R4Q7L1T6 521 aa15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 CRACR2BQ8N4Y2 399 aaPredicted RBP15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 IGDCC4Q8TDY8 1250 aa15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 BRF1Q92994 677 aa15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 DYNLL2Q96FJ2 89 aa15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 ZNF274Q96GC6 653 aaPredicted RBP15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 L3MBTL3Q96JM7 780 aaPredicted RBP15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 TCEANC2Q96MN5 208 aa15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 ADARB2Q9NS39 739 aaKnown RBP15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 TCP11L1Q9NUJ3 509 aa15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 ANGEL1Q9UNK9 670 aaKnown RBP15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 TACC3Q9Y6A5 838 aa15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 CDK5RAP2Q96SN8 1893 aa15.6■□□□□ 0.09
VTI1BP1-201ENST00000486325 FOCADQ5VW36 1801 aa15.59■□□□□ 0.09
VTI1BP1-201ENST00000486325 ECM29Q5VYK3 1845 aa15.59■□□□□ 0.09
VTI1BP1-201ENST00000486325 SHTN1A0MZ66 631 aa15.59■□□□□ 0.09
VTI1BP1-201ENST00000486325 TSPY2A6NKD2 308 aa15.59■□□□□ 0.09
VTI1BP1-201ENST00000486325 PRDM1O75626 825 aa15.59■□□□□ 0.09
VTI1BP1-201ENST00000486325 EPS15P42566 896 aa15.59■□□□□ 0.09
VTI1BP1-201ENST00000486325 ANTXR2P58335 489 aa15.59■□□□□ 0.09
VTI1BP1-201ENST00000486325 TFAP4Q01664 338 aa15.59■□□□□ 0.09
VTI1BP1-201ENST00000486325 TMEM67Q5HYA8 995 aa15.59■□□□□ 0.09
VTI1BP1-201ENST00000486325 SYNE3Q6ZMZ3 975 aa15.59■□□□□ 0.09
VTI1BP1-201ENST00000486325 CHST3Q7LGC8 479 aa15.59■□□□□ 0.09
VTI1BP1-201ENST00000486325 METTL16Q86W50 562 aaKnown RBP15.59■□□□□ 0.09
VTI1BP1-201ENST00000486325 APOBEC3FQ8IUX4 373 aaKnown RBP15.59■□□□□ 0.09
VTI1BP1-201ENST00000486325 ZFPM1Q8IX07 1006 aa15.59■□□□□ 0.09
VTI1BP1-201ENST00000486325 CCDC17Q96LX7 622 aa15.59■□□□□ 0.09
VTI1BP1-201ENST00000486325 ZSCAN10Q96SZ4 725 aaPredicted RBP15.59■□□□□ 0.09
VTI1BP1-201ENST00000486325 HERC5Q9UII4 1024 aaKnown RBP15.59■□□□□ 0.09
VTI1BP1-201ENST00000486325 TIAM2Q8IVF5 1701 aa15.59■□□□□ 0.09
VTI1BP1-201ENST00000486325 NAV1Q8NEY1 1877 aa15.59■□□□□ 0.09
VTI1BP1-201ENST00000486325 DDTLA6NHG4 134 aaPredicted RBP15.58■□□□□ 0.08
VTI1BP1-201ENST00000486325 SH2B2O14492 632 aaPredicted RBP15.58■□□□□ 0.08
VTI1BP1-201ENST00000486325 TSPY3P0CV98 308 aa15.58■□□□□ 0.08
VTI1BP1-201ENST00000486325 TSPY8P0CW00 308 aa15.58■□□□□ 0.08
VTI1BP1-201ENST00000486325 SLC4A3P48751 1232 aa15.58■□□□□ 0.08
VTI1BP1-201ENST00000486325 CUL4AQ13619 759 aa15.58■□□□□ 0.08
VTI1BP1-201ENST00000486325 WTAPQ15007 396 aa15.58■□□□□ 0.08
VTI1BP1-201ENST00000486325 SLC4A8Q2Y0W8 1093 aa15.58■□□□□ 0.08
VTI1BP1-201ENST00000486325 PPP4R3BQ5MIZ7 849 aa15.58■□□□□ 0.08
VTI1BP1-201ENST00000486325 NOL8Q76FK4 1167 aaKnown RBP15.58■□□□□ 0.08
VTI1BP1-201ENST00000486325 SGMS1Q86VZ5 419 aa15.58■□□□□ 0.08
VTI1BP1-201ENST00000486325 HOOK2Q96ED9 719 aa15.58■□□□□ 0.08
VTI1BP1-201ENST00000486325 INTS4Q96HW7 963 aaKnown RBP15.58■□□□□ 0.08
VTI1BP1-201ENST00000486325 CSRNP1Q96S65 589 aa15.58■□□□□ 0.08
VTI1BP1-201ENST00000486325 LRRC2Q9BYS8 371 aa15.58■□□□□ 0.08
VTI1BP1-201ENST00000486325 HACL1Q9UJ83 578 aa15.58■□□□□ 0.08
VTI1BP1-201ENST00000486325 TPCN1Q9ULQ1 816 aa15.58■□□□□ 0.08
VTI1BP1-201ENST00000486325 IQCA1LA6NCM1 817 aa15.57■□□□□ 0.08
VTI1BP1-201ENST00000486325 CCDC69A6NI79 296 aa15.57■□□□□ 0.08
VTI1BP1-201ENST00000486325 SMIM22K7EJ46 135 aa15.57■□□□□ 0.08
VTI1BP1-201ENST00000486325 TBC1D12O60347 775 aa15.57■□□□□ 0.08
VTI1BP1-201ENST00000486325 RASA1P20936 1047 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms