RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 LOC285556D6RIA3 1793 aa25.61■■□□□ 1.69
LMBR1-217ENST00000485985 CYP2E1P05181 493 aaPredicted RBP25.6■■□□□ 1.69
LMBR1-217ENST00000485985 LDHCP07864 332 aa25.6■■□□□ 1.69
LMBR1-217ENST00000485985 PTPRAP18433 802 aa25.6■■□□□ 1.69
LMBR1-217ENST00000485985 CCDC158Q5M9N0 1113 aa25.6■■□□□ 1.69
LMBR1-217ENST00000485985 FASTKD5Q7L8L6 764 aaKnown RBP25.6■■□□□ 1.69
LMBR1-217ENST00000485985 AFG3L2Q9Y4W6 797 aa25.6■■□□□ 1.69
LMBR1-217ENST00000485985 MYH1P12882 1939 aa25.59■■□□□ 1.69
LMBR1-217ENST00000485985 A0A0G2JLL6 359 aaPredicted RBP25.59■■□□□ 1.69
LMBR1-217ENST00000485985 FAM196BA6NMK8 535 aa25.59■■□□□ 1.69
LMBR1-217ENST00000485985 NPM3O75607 178 aaKnown RBP25.59■■□□□ 1.69
LMBR1-217ENST00000485985 FCGRTP55899 365 aa25.59■■□□□ 1.69
LMBR1-217ENST00000485985 PRRT2Q7Z6L0 340 aaPredicted RBP25.59■■□□□ 1.69
LMBR1-217ENST00000485985 NKX2-3Q8TAU0 364 aa25.59■■□□□ 1.69
LMBR1-217ENST00000485985 EAF2Q96CJ1 260 aaPredicted RBP25.59■■□□□ 1.69
LMBR1-217ENST00000485985 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.59■■□□□ 1.69
LMBR1-217ENST00000485985 GJB1P08034 283 aa25.58■■□□□ 1.69
LMBR1-217ENST00000485985 CCL5P13501 91 aa25.58■■□□□ 1.69
LMBR1-217ENST00000485985 PRKCZQ05513 592 aa25.58■■□□□ 1.69
LMBR1-217ENST00000485985 ADGRA1Q86SQ6 560 aa25.58■■□□□ 1.69
LMBR1-217ENST00000485985 ZNF512BQ96KM6 892 aaPredicted RBP25.58■■□□□ 1.69
LMBR1-217ENST00000485985 CCDC8Q9H0W5 538 aaPredicted RBP25.58■■□□□ 1.69
LMBR1-217ENST00000485985 EXOC6BQ9Y2D4 811 aa25.58■■□□□ 1.69
LMBR1-217ENST00000485985 ZAP70P43403 619 aa25.57■■□□□ 1.68
LMBR1-217ENST00000485985 GJA8P48165 433 aa25.57■■□□□ 1.68
LMBR1-217ENST00000485985 SH3RF3Q8TEJ3 882 aaPredicted RBP25.57■■□□□ 1.68
LMBR1-217ENST00000485985 OSBPL5Q9H0X9 879 aaPredicted RBP25.57■■□□□ 1.68
LMBR1-217ENST00000485985 BIN2Q9UBW5 565 aaPredicted RBP25.57■■□□□ 1.68
LMBR1-217ENST00000485985 TRIOBPQ9H2D6 2365 aa25.56■■□□□ 1.68
LMBR1-217ENST00000485985 CTNND1O60716 968 aaKnown RBP25.56■■□□□ 1.68
LMBR1-217ENST00000485985 MAP4K4O95819 1239 aaPredicted RBP25.56■■□□□ 1.68
LMBR1-217ENST00000485985 NAA16Q6N069 864 aaPredicted RBP25.56■■□□□ 1.68
LMBR1-217ENST00000485985 GADL1Q6ZQY3 521 aa25.56■■□□□ 1.68
LMBR1-217ENST00000485985 TEX11Q8IYF3 940 aa25.56■■□□□ 1.68
LMBR1-217ENST00000485985 RNF208Q9H0X6 261 aa25.56■■□□□ 1.68
LMBR1-217ENST00000485985 PIH1D3Q9NQM4 214 aaKnown RBP25.56■■□□□ 1.68
LMBR1-217ENST00000485985 GABRQQ9UN88 632 aa25.56■■□□□ 1.68
LMBR1-217ENST00000485985 SLC45A1Q9Y2W3 748 aa25.56■■□□□ 1.68
LMBR1-217ENST00000485985 UBXN2AP68543 259 aa25.55■■□□□ 1.68
LMBR1-217ENST00000485985 UBE2Q1Q7Z7E8 422 aa25.55■■□□□ 1.68
LMBR1-217ENST00000485985 CCDC84Q86UT8 332 aaPredicted RBP25.55■■□□□ 1.68
LMBR1-217ENST00000485985 SLAIN1Q8ND83 568 aa25.55■■□□□ 1.68
LMBR1-217ENST00000485985 DPF3Q92784 378 aa25.55■■□□□ 1.68
LMBR1-217ENST00000485985 AATFQ9NY61 560 aaKnown RBP eCLIP25.55■■□□□ 1.68
LMBR1-217ENST00000485985 DDX60LQ5H9U9 1706 aaKnown RBP25.54■■□□□ 1.68
LMBR1-217ENST00000485985 TBC1D12O60347 775 aa25.53■■□□□ 1.68
LMBR1-217ENST00000485985 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.53■■□□□ 1.68
LMBR1-217ENST00000485985 COG6Q9Y2V7 657 aa25.53■■□□□ 1.68
LMBR1-217ENST00000485985 NDUFB9Q9Y6M9 179 aa25.53■■□□□ 1.68
LMBR1-217ENST00000485985 TRIM75PA6NK02 468 aa25.52■■□□□ 1.68
LMBR1-217ENST00000485985 NOL10Q9BSC4 688 aaKnown RBP25.52■■□□□ 1.68
LMBR1-217ENST00000485985 ADCY3O60266 1144 aa25.51■■□□□ 1.67
LMBR1-217ENST00000485985 MS4A1P11836 297 aa25.51■■□□□ 1.67
LMBR1-217ENST00000485985 FLT3LGP49771 235 aa25.51■■□□□ 1.67
LMBR1-217ENST00000485985 CHRDL2Q6WN34 429 aa25.51■■□□□ 1.67
LMBR1-217ENST00000485985 ERC1Q8IUD2 1116 aa25.51■■□□□ 1.67
LMBR1-217ENST00000485985 SMCR8Q8TEV9 937 aaPredicted RBP25.51■■□□□ 1.67
LMBR1-217ENST00000485985 UNC93B1Q9H1C4 597 aa25.51■■□□□ 1.67
LMBR1-217ENST00000485985 NAV1Q8NEY1 1877 aa25.51■■□□□ 1.67
LMBR1-217ENST00000485985 FLT1P17948 1338 aa25.5■■□□□ 1.67
LMBR1-217ENST00000485985 PPP4CP60510 307 aa25.5■■□□□ 1.67
LMBR1-217ENST00000485985 RRP1BQ14684 758 aaKnown RBP25.5■■□□□ 1.67
LMBR1-217ENST00000485985 AACSQ86V21 672 aa25.5■■□□□ 1.67
LMBR1-217ENST00000485985 SIRT2Q8IXJ6 389 aa25.5■■□□□ 1.67
LMBR1-217ENST00000485985 U2AF1L4Q8WU68 220 aaKnown RBP25.5■■□□□ 1.67
LMBR1-217ENST00000485985 HTATIP2Q9BUP3 242 aa25.5■■□□□ 1.67
LMBR1-217ENST00000485985 RCAN3Q9UKA8 241 aa25.5■■□□□ 1.67
LMBR1-217ENST00000485985 TNPO2O14787 897 aaKnown RBP25.49■■□□□ 1.67
LMBR1-217ENST00000485985 BAG3O95817 575 aa25.49■■□□□ 1.67
LMBR1-217ENST00000485985 PXYLP1Q8TE99 480 aa25.49■■□□□ 1.67
LMBR1-217ENST00000485985 TGFBRAP1Q8WUH2 860 aa25.49■■□□□ 1.67
LMBR1-217ENST00000485985 IL1RAPL2Q9NP60 686 aa25.49■■□□□ 1.67
LMBR1-217ENST00000485985 ZBTB40Q9NUA8 1239 aa25.49■■□□□ 1.67
LMBR1-217ENST00000485985 DDX19BQ9UMR2 479 aa25.49■■□□□ 1.67
LMBR1-217ENST00000485985 AGTPBP1Q9UPW5 1226 aa25.49■■□□□ 1.67
LMBR1-217ENST00000485985 DOCK3Q8IZD9 2030 aa25.48■■□□□ 1.67
LMBR1-217ENST00000485985 MYH7P12883 1935 aa25.48■■□□□ 1.67
LMBR1-217ENST00000485985 SGPL1O95470 568 aa25.48■■□□□ 1.67
LMBR1-217ENST00000485985 ELNP15502 786 aa25.48■■□□□ 1.67
LMBR1-217ENST00000485985 PLCG2P16885 1265 aa25.48■■□□□ 1.67
LMBR1-217ENST00000485985 IRF5Q13568 498 aa25.48■■□□□ 1.67
LMBR1-217ENST00000485985 MAPKAPK5Q8IW41 473 aa25.48■■□□□ 1.67
LMBR1-217ENST00000485985 RHPN1Q8TCX5 695 aa25.48■■□□□ 1.67
LMBR1-217ENST00000485985 ANTXR1Q9H6X2 564 aa25.48■■□□□ 1.67
LMBR1-217ENST00000485985 IDH1O75874 414 aaKnown RBP25.47■■□□□ 1.67
LMBR1-217ENST00000485985 DYNLL1P63167 89 aaKnown RBP25.47■■□□□ 1.67
LMBR1-217ENST00000485985 DNAJC18Q9H819 358 aa25.47■■□□□ 1.67
LMBR1-217ENST00000485985 IGSF3O75054 1194 aa25.46■■□□□ 1.67
LMBR1-217ENST00000485985 FARP2O94887 1054 aaPredicted RBP25.46■■□□□ 1.67
LMBR1-217ENST00000485985 INHAP05111 366 aa25.46■■□□□ 1.67
LMBR1-217ENST00000485985 CYP7A1P22680 504 aa25.46■■□□□ 1.67
LMBR1-217ENST00000485985 TREML2Q5T2D2 321 aa25.46■■□□□ 1.67
LMBR1-217ENST00000485985 ANKRD13CQ8N6S4 541 aa25.46■■□□□ 1.67
LMBR1-217ENST00000485985 RBM27Q9P2N5 1060 aaKnown RBP25.46■■□□□ 1.67
LMBR1-217ENST00000485985 HERC5Q9UII4 1024 aaKnown RBP25.46■■□□□ 1.67
LMBR1-217ENST00000485985 APBB1O00213 710 aa25.45■■□□□ 1.66
LMBR1-217ENST00000485985 CAP2P40123 477 aa25.45■■□□□ 1.66
LMBR1-217ENST00000485985 HSP90AB4PQ58FF6 505 aa25.45■■□□□ 1.66
LMBR1-217ENST00000485985 PROCA1Q8NCQ7 364 aaPredicted RBP25.45■■□□□ 1.66
LMBR1-217ENST00000485985 DHX36Q9H2U1 1008 aaKnown RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms