RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 TREML2Q5T2D2 321 aa16.96■□□□□ 0.31
SMARCD3-211ENST00000485592 DEFB118Q96PH6 123 aa16.96■□□□□ 0.31
SMARCD3-211ENST00000485592 FAM196BA6NMK8 535 aa16.95■□□□□ 0.3
SMARCD3-211ENST00000485592 ZBTB7BO15156 539 aaPredicted RBP16.95■□□□□ 0.3
SMARCD3-211ENST00000485592 GCLCP48506 637 aaPredicted RBP16.95■□□□□ 0.3
SMARCD3-211ENST00000485592 MTX1Q13505 466 aa16.95■□□□□ 0.3
SMARCD3-211ENST00000485592 SPATA5Q8NB90 893 aa16.95■□□□□ 0.3
SMARCD3-211ENST00000485592 ZNF280CQ8ND82 737 aa16.95■□□□□ 0.3
SMARCD3-211ENST00000485592 NOL10Q9BSC4 688 aaKnown RBP16.95■□□□□ 0.3
SMARCD3-211ENST00000485592 PAK6Q9NQU5 681 aaPredicted RBP16.95■□□□□ 0.3
SMARCD3-211ENST00000485592 RAI14Q9P0K7 980 aa16.95■□□□□ 0.3
SMARCD3-211ENST00000485592 HMG20BQ9P0W2 317 aa16.95■□□□□ 0.3
SMARCD3-211ENST00000485592 SPP2Q13103 211 aa16.94■□□□□ 0.3
SMARCD3-211ENST00000485592 ARHGAP45Q92619 1136 aa16.94■□□□□ 0.3
SMARCD3-211ENST00000485592 NSUN4Q96CB9 384 aaKnown RBP16.94■□□□□ 0.3
SMARCD3-211ENST00000485592 AS3MTQ9HBK9 375 aa16.94■□□□□ 0.3
SMARCD3-211ENST00000485592 DOCK3Q8IZD9 2030 aa16.94■□□□□ 0.3
SMARCD3-211ENST00000485592 CEP290O15078 2479 aa16.93■□□□□ 0.3
SMARCD3-211ENST00000485592 TRIOBPQ9H2D6 2365 aa16.93■□□□□ 0.3
SMARCD3-211ENST00000485592 MAST2Q6P0Q8 1798 aa16.93■□□□□ 0.3
SMARCD3-211ENST00000485592 A0A1W2PPC1 479 aa16.93■□□□□ 0.3
SMARCD3-211ENST00000485592 ARID4AP29374 1257 aaPredicted RBP16.93■□□□□ 0.3
SMARCD3-211ENST00000485592 HMGCS2P54868 508 aa16.93■□□□□ 0.3
SMARCD3-211ENST00000485592 PI16Q6UXB8 463 aa16.93■□□□□ 0.3
SMARCD3-211ENST00000485592 ZNF384Q8TF68 577 aa16.93■□□□□ 0.3
SMARCD3-211ENST00000485592 PRO3102Q9H379 93 aa16.93■□□□□ 0.3
SMARCD3-211ENST00000485592 HERC5Q9UII4 1024 aaKnown RBP16.93■□□□□ 0.3
SMARCD3-211ENST00000485592 USP17L5A8MUK1 530 aa16.92■□□□□ 0.3
SMARCD3-211ENST00000485592 HMGCRP04035 888 aa16.92■□□□□ 0.3
SMARCD3-211ENST00000485592 CAP2P40123 477 aa16.92■□□□□ 0.3
SMARCD3-211ENST00000485592 RARSP54136 660 aaKnown RBP16.92■□□□□ 0.3
SMARCD3-211ENST00000485592 TBC1D9Q6ZT07 1266 aa16.92■□□□□ 0.3
SMARCD3-211ENST00000485592 TEX11Q8IYF3 940 aa16.92■□□□□ 0.3
SMARCD3-211ENST00000485592 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.92■□□□□ 0.3
SMARCD3-211ENST00000485592 LRP2BPQ9P2M1 347 aa16.92■□□□□ 0.3
SMARCD3-211ENST00000485592 UQCRFS1P1P0C7P4 283 aa16.91■□□□□ 0.3
SMARCD3-211ENST00000485592 G3BP1Q13283 466 aaKnown RBP eCLIP16.91■□□□□ 0.3
SMARCD3-211ENST00000485592 NECAB2Q7Z6G3 386 aa16.91■□□□□ 0.3
SMARCD3-211ENST00000485592 PAWRQ96IZ0 340 aaKnown RBP16.91■□□□□ 0.3
SMARCD3-211ENST00000485592 CRISPLD2Q9H0B8 497 aa16.91■□□□□ 0.3
SMARCD3-211ENST00000485592 ASCC2Q9H1I8 757 aaPredicted RBP16.91■□□□□ 0.3
SMARCD3-211ENST00000485592 ALPK3Q96L96 1907 aa16.9■□□□□ 0.3
SMARCD3-211ENST00000485592 BAG3O95817 575 aa16.9■□□□□ 0.3
SMARCD3-211ENST00000485592 GNAI2P04899 355 aa16.9■□□□□ 0.3
SMARCD3-211ENST00000485592 MCAMP43121 646 aa16.9■□□□□ 0.3
SMARCD3-211ENST00000485592 IRX3P78415 501 aaPredicted RBP16.9■□□□□ 0.3
SMARCD3-211ENST00000485592 SH3D19Q5HYK7 790 aa16.9■□□□□ 0.3
SMARCD3-211ENST00000485592 ANKLE1Q8NAG6 615 aa16.9■□□□□ 0.3
SMARCD3-211ENST00000485592 DHX36Q9H2U1 1008 aaKnown RBP16.9■□□□□ 0.3
SMARCD3-211ENST00000485592 PI4KBQ9UBF8 816 aa16.9■□□□□ 0.3
SMARCD3-211ENST00000485592 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.9■□□□□ 0.3
SMARCD3-211ENST00000485592 IPO8O15397 1037 aaKnown RBP16.89■□□□□ 0.29
SMARCD3-211ENST00000485592 PLCG2P16885 1265 aa16.89■□□□□ 0.29
SMARCD3-211ENST00000485592 TRIM34Q9BYJ4 488 aa16.89■□□□□ 0.29
SMARCD3-211ENST00000485592 HMX1Q9NP08 348 aaPredicted RBP16.89■□□□□ 0.29
SMARCD3-211ENST00000485592 TMOD4Q9NZQ9 345 aa16.89■□□□□ 0.29
SMARCD3-211ENST00000485592 RPTORQ8N122 1335 aa16.89■□□□□ 0.29
SMARCD3-211ENST00000485592 SIPA1L1O43166 1804 aa16.89■□□□□ 0.29
SMARCD3-211ENST00000485592 FOCADQ5VW36 1801 aa16.89■□□□□ 0.29
SMARCD3-211ENST00000485592 ASNSP08243 561 aa16.88■□□□□ 0.29
SMARCD3-211ENST00000485592 MTMR2Q13614 643 aa16.88■□□□□ 0.29
SMARCD3-211ENST00000485592 TTC39AQ5SRH9 613 aa16.88■□□□□ 0.29
SMARCD3-211ENST00000485592 NAA16Q6N069 864 aaPredicted RBP16.88■□□□□ 0.29
SMARCD3-211ENST00000485592 SH3RF3Q8TEJ3 882 aaPredicted RBP16.88■□□□□ 0.29
SMARCD3-211ENST00000485592 AATFQ9NY61 560 aaKnown RBP eCLIP16.88■□□□□ 0.29
SMARCD3-211ENST00000485592 CDK5RAP2Q96SN8 1893 aa16.87■□□□□ 0.29
SMARCD3-211ENST00000485592 RRP1BQ14684 758 aaKnown RBP16.87■□□□□ 0.29
SMARCD3-211ENST00000485592 CRACR2BQ8N4Y2 399 aaPredicted RBP16.87■□□□□ 0.29
SMARCD3-211ENST00000485592 DIS3LQ8TF46 1054 aaKnown RBP16.87■□□□□ 0.29
SMARCD3-211ENST00000485592 WDR18Q9BV38 432 aa16.87■□□□□ 0.29
SMARCD3-211ENST00000485592 MORF4L1Q9UBU8 362 aa16.87■□□□□ 0.29
SMARCD3-211ENST00000485592 STAP2Q9UGK3 403 aa16.87■□□□□ 0.29
SMARCD3-211ENST00000485592 GJD2Q9UKL4 321 aa16.87■□□□□ 0.29
SMARCD3-211ENST00000485592 DDX60LQ5H9U9 1706 aaKnown RBP16.87■□□□□ 0.29
SMARCD3-211ENST00000485592 PLXNB2O15031 1838 aa16.86■□□□□ 0.29
SMARCD3-211ENST00000485592 PNMA6EA0A0J9YXQ4 647 aa16.86■□□□□ 0.29
SMARCD3-211ENST00000485592 TRIM27P14373 513 aa16.86■□□□□ 0.29
SMARCD3-211ENST00000485592 BACE1P56817 501 aa16.86■□□□□ 0.29
SMARCD3-211ENST00000485592 CCDC158Q5M9N0 1113 aa16.86■□□□□ 0.29
SMARCD3-211ENST00000485592 DIEXFQ68CQ4 756 aaKnown RBP16.86■□□□□ 0.29
SMARCD3-211ENST00000485592 C7orf61Q8IZ16 206 aa16.86■□□□□ 0.29
SMARCD3-211ENST00000485592 TGFBRAP1Q8WUH2 860 aa16.86■□□□□ 0.29
SMARCD3-211ENST00000485592 SOCS4Q8WXH5 440 aa16.86■□□□□ 0.29
SMARCD3-211ENST00000485592 FRAT1Q92837 279 aaPredicted RBP16.86■□□□□ 0.29
SMARCD3-211ENST00000485592 NBPF3Q9H094 633 aa16.86■□□□□ 0.29
SMARCD3-211ENST00000485592 GINM1Q9NU53 330 aa16.86■□□□□ 0.29
SMARCD3-211ENST00000485592 C19orf81C9J6K1 198 aa16.85■□□□□ 0.29
SMARCD3-211ENST00000485592 HOXA7P31268 230 aaPredicted RBP16.85■□□□□ 0.29
SMARCD3-211ENST00000485592 OS9Q13438 667 aaPredicted RBP16.85■□□□□ 0.29
SMARCD3-211ENST00000485592 PDE3AQ14432 1141 aa16.85■□□□□ 0.29
SMARCD3-211ENST00000485592 ATF7IPQ6VMQ6 1270 aa16.85■□□□□ 0.29
SMARCD3-211ENST00000485592 MAPKAPK5Q8IW41 473 aa16.85■□□□□ 0.29
SMARCD3-211ENST00000485592 NUDT12Q9BQG2 462 aa16.85■□□□□ 0.29
SMARCD3-211ENST00000485592 C11orf49Q9H6J7 331 aa16.85■□□□□ 0.29
SMARCD3-211ENST00000485592 FLT1P17948 1338 aa16.85■□□□□ 0.29
SMARCD3-211ENST00000485592 USP17L10C9JJH3 530 aa16.84■□□□□ 0.29
SMARCD3-211ENST00000485592 IGSF3O75054 1194 aa16.84■□□□□ 0.29
SMARCD3-211ENST00000485592 HLA-DOAP06340 250 aa16.84■□□□□ 0.29
SMARCD3-211ENST00000485592 CYP2B6P20813 491 aa16.84■□□□□ 0.29
SMARCD3-211ENST00000485592 PPP4CP60510 307 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms