RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 NAV1Q8NEY1 1877 aa16.29■□□□□ 0.2
UBA3-210ENST00000485424 PNMA6EA0A0J9YXQ4 647 aa16.29■□□□□ 0.2
UBA3-210ENST00000485424 UQCRFS1P1P0C7P4 283 aa16.29■□□□□ 0.2
UBA3-210ENST00000485424 PRKCZQ05513 592 aa16.29■□□□□ 0.2
UBA3-210ENST00000485424 DIEXFQ68CQ4 756 aaKnown RBP16.29■□□□□ 0.2
UBA3-210ENST00000485424 ITPRIPQ8IWB1 547 aa16.29■□□□□ 0.2
UBA3-210ENST00000485424 SPATA5Q8NB90 893 aa16.29■□□□□ 0.2
UBA3-210ENST00000485424 AFG3L2Q9Y4W6 797 aa16.29■□□□□ 0.2
UBA3-210ENST00000485424 ZHX2Q9Y6X8 837 aa16.29■□□□□ 0.2
UBA3-210ENST00000485424 LAMA3Q16787 3333 aa16.29■□□□□ 0.2
UBA3-210ENST00000485424 H0YGN5 161 aa16.28■□□□□ 0.2
UBA3-210ENST00000485424 FCGRTP55899 365 aa16.28■□□□□ 0.2
UBA3-210ENST00000485424 MAP3K10Q02779 954 aa16.28■□□□□ 0.2
UBA3-210ENST00000485424 MECOMQ03112 1051 aa16.28■□□□□ 0.2
UBA3-210ENST00000485424 CCDC158Q5M9N0 1113 aa16.28■□□□□ 0.2
UBA3-210ENST00000485424 TTC39AQ5SRH9 613 aa16.28■□□□□ 0.2
UBA3-210ENST00000485424 GADL1Q6ZQY3 521 aa16.28■□□□□ 0.2
UBA3-210ENST00000485424 MIER1Q8N108 512 aa16.28■□□□□ 0.2
UBA3-210ENST00000485424 ZNF384Q8TF68 577 aa16.28■□□□□ 0.2
UBA3-210ENST00000485424 FAM163AQ96GL9 167 aaPredicted RBP16.28■□□□□ 0.2
UBA3-210ENST00000485424 HMG20BQ9P0W2 317 aa16.28■□□□□ 0.2
UBA3-210ENST00000485424 LRP2BPQ9P2M1 347 aa16.28■□□□□ 0.2
UBA3-210ENST00000485424 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.28■□□□□ 0.2
UBA3-210ENST00000485424 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.28■□□□□ 0.2
UBA3-210ENST00000485424 DNAH12Q6ZR08 3092 aa16.27■□□□□ 0.2
UBA3-210ENST00000485424 MYH7P12883 1935 aa16.27■□□□□ 0.2
UBA3-210ENST00000485424 CCL5P13501 91 aa16.27■□□□□ 0.2
UBA3-210ENST00000485424 ARID4AP29374 1257 aaPredicted RBP16.27■□□□□ 0.2
UBA3-210ENST00000485424 FASTKD5Q7L8L6 764 aaKnown RBP16.27■□□□□ 0.2
UBA3-210ENST00000485424 GABRQQ9UN88 632 aa16.27■□□□□ 0.2
UBA3-210ENST00000485424 GPR75-ASB3A0A0A6YYF3 556 aa16.26■□□□□ 0.19
UBA3-210ENST00000485424 CTNND1O60716 968 aaKnown RBP16.26■□□□□ 0.19
UBA3-210ENST00000485424 SURF6O75683 361 aaKnown RBP16.26■□□□□ 0.19
UBA3-210ENST00000485424 MAP4K4O95819 1239 aaPredicted RBP16.26■□□□□ 0.19
UBA3-210ENST00000485424 GJB1P08034 283 aa16.26■□□□□ 0.19
UBA3-210ENST00000485424 GJA8P48165 433 aa16.26■□□□□ 0.19
UBA3-210ENST00000485424 RHBDL3P58872 404 aa16.26■□□□□ 0.19
UBA3-210ENST00000485424 UBE2Q1Q7Z7E8 422 aa16.26■□□□□ 0.19
UBA3-210ENST00000485424 SLAIN1Q8ND83 568 aa16.26■□□□□ 0.19
UBA3-210ENST00000485424 NKX2-3Q8TAU0 364 aa16.26■□□□□ 0.19
UBA3-210ENST00000485424 SLC45A1Q9Y2W3 748 aa16.26■□□□□ 0.19
UBA3-210ENST00000485424 COL6A3P12111 3177 aa16.25■□□□□ 0.19
UBA3-210ENST00000485424 TRIM75PA6NK02 468 aa16.25■□□□□ 0.19
UBA3-210ENST00000485424 ATP8B2P98198 1209 aa16.25■□□□□ 0.19
UBA3-210ENST00000485424 PI16Q6UXB8 463 aa16.25■□□□□ 0.19
UBA3-210ENST00000485424 TBC1D9Q6ZT07 1266 aa16.25■□□□□ 0.19
UBA3-210ENST00000485424 CCDC84Q86UT8 332 aaPredicted RBP16.25■□□□□ 0.19
UBA3-210ENST00000485424 RNF208Q9H0X6 261 aa16.25■□□□□ 0.19
UBA3-210ENST00000485424 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.25■□□□□ 0.19
UBA3-210ENST00000485424 BIN2Q9UBW5 565 aaPredicted RBP16.25■□□□□ 0.19
UBA3-210ENST00000485424 FAM196BA6NMK8 535 aa16.24■□□□□ 0.19
UBA3-210ENST00000485424 BAG3O95817 575 aa16.24■□□□□ 0.19
UBA3-210ENST00000485424 MCAMP43121 646 aa16.24■□□□□ 0.19
UBA3-210ENST00000485424 UBXN2AP68543 259 aa16.24■□□□□ 0.19
UBA3-210ENST00000485424 TNNI3KQ59H18 835 aa16.24■□□□□ 0.19
UBA3-210ENST00000485424 SMCR8Q8TEV9 937 aaPredicted RBP16.24■□□□□ 0.19
UBA3-210ENST00000485424 NSUN4Q96CB9 384 aaKnown RBP16.24■□□□□ 0.19
UBA3-210ENST00000485424 C1orf115Q9H7X2 142 aa16.24■□□□□ 0.19
UBA3-210ENST00000485424 GPR108Q9NPR9 543 aa16.24■□□□□ 0.19
UBA3-210ENST00000485424 FPGT-TNNI3KV9GXZ4 949 aa16.24■□□□□ 0.19
UBA3-210ENST00000485424 PARP14Q460N5 1801 aa16.24■□□□□ 0.19
UBA3-210ENST00000485424 TBC1D12O60347 775 aa16.23■□□□□ 0.19
UBA3-210ENST00000485424 PLCG2P16885 1265 aa16.23■□□□□ 0.19
UBA3-210ENST00000485424 NAA16Q6N069 864 aaPredicted RBP16.23■□□□□ 0.19
UBA3-210ENST00000485424 TEX11Q8IYF3 940 aa16.23■□□□□ 0.19
UBA3-210ENST00000485424 UNC93B1Q9H1C4 597 aa16.23■□□□□ 0.19
UBA3-210ENST00000485424 AGTPBP1Q9UPW5 1226 aa16.23■□□□□ 0.19
UBA3-210ENST00000485424 ZNFX1Q9P2E3 1918 aaKnown RBP16.22■□□□□ 0.19
UBA3-210ENST00000485424 TNPO2O14787 897 aaKnown RBP16.22■□□□□ 0.19
UBA3-210ENST00000485424 ADCY3O60266 1144 aa16.22■□□□□ 0.19
UBA3-210ENST00000485424 ELNP15502 786 aa16.22■□□□□ 0.19
UBA3-210ENST00000485424 FLT3LGP49771 235 aa16.22■□□□□ 0.19
UBA3-210ENST00000485424 TREML2Q5T2D2 321 aa16.22■□□□□ 0.19
UBA3-210ENST00000485424 SSH3Q8TE77 659 aa16.22■□□□□ 0.19
UBA3-210ENST00000485424 U2AF1L4Q8WU68 220 aaKnown RBP16.22■□□□□ 0.19
UBA3-210ENST00000485424 DPF3Q92784 378 aa16.22■□□□□ 0.19
UBA3-210ENST00000485424 TRIM34Q9BYJ4 488 aa16.22■□□□□ 0.19
UBA3-210ENST00000485424 SNRKQ9NRH2 765 aa16.22■□□□□ 0.19
UBA3-210ENST00000485424 BAZ2AQ9UIF9 1905 aaKnown RBP16.21■□□□□ 0.19
UBA3-210ENST00000485424 FARP2O94887 1054 aaPredicted RBP16.21■□□□□ 0.19
UBA3-210ENST00000485424 INHAP05111 366 aa16.21■□□□□ 0.19
UBA3-210ENST00000485424 IRF5Q13568 498 aa16.21■□□□□ 0.19
UBA3-210ENST00000485424 ANKRD13CQ8N6S4 541 aa16.21■□□□□ 0.19
UBA3-210ENST00000485424 PROCA1Q8NCQ7 364 aaPredicted RBP16.21■□□□□ 0.19
UBA3-210ENST00000485424 DBNDD2Q9BQY9 259 aa16.21■□□□□ 0.19
UBA3-210ENST00000485424 OSBPL5Q9H0X9 879 aaPredicted RBP16.21■□□□□ 0.19
UBA3-210ENST00000485424 AATFQ9NY61 560 aaKnown RBP eCLIP16.21■□□□□ 0.19
UBA3-210ENST00000485424 ZBED9Q6R2W3 1325 aa16.2■□□□□ 0.18
UBA3-210ENST00000485424 MS4A1P11836 297 aa16.2■□□□□ 0.18
UBA3-210ENST00000485424 FAM110CQ1W6H9 321 aa16.2■□□□□ 0.18
UBA3-210ENST00000485424 PXYLP1Q8TE99 480 aa16.2■□□□□ 0.18
UBA3-210ENST00000485424 HTATIP2Q9BUP3 242 aa16.2■□□□□ 0.18
UBA3-210ENST00000485424 PNMA3Q9UL41 463 aa16.2■□□□□ 0.18
UBA3-210ENST00000485424 COL11A1P12107 1806 aaPredicted RBP16.19■□□□□ 0.18
UBA3-210ENST00000485424 SGPL1O95470 568 aa16.19■□□□□ 0.18
UBA3-210ENST00000485424 RRP1BQ14684 758 aaKnown RBP16.19■□□□□ 0.18
UBA3-210ENST00000485424 ERC1Q8IUD2 1116 aa16.19■□□□□ 0.18
UBA3-210ENST00000485424 SH3RF3Q8TEJ3 882 aaPredicted RBP16.19■□□□□ 0.18
UBA3-210ENST00000485424 TBC1D2Q9BYX2 928 aa16.19■□□□□ 0.18
UBA3-210ENST00000485424 DHX36Q9H2U1 1008 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms