RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 SHISA4Q96DD7 197 aa23.63■■□□□ 1.37
COL27A1-205ENST00000485397 AATFQ9NY61 560 aaKnown RBP eCLIP23.63■■□□□ 1.37
COL27A1-205ENST00000485397 PCDH10Q9P2E7 1040 aa23.63■■□□□ 1.37
COL27A1-205ENST00000485397 BIN2Q9UBW5 565 aaPredicted RBP23.63■■□□□ 1.37
COL27A1-205ENST00000485397 AGTPBP1Q9UPW5 1226 aa23.63■■□□□ 1.37
COL27A1-205ENST00000485397 PTPRFP10586 1907 aa23.63■■□□□ 1.37
COL27A1-205ENST00000485397 COL2A1P02458 1487 aaPredicted RBP23.62■■□□□ 1.37
COL27A1-205ENST00000485397 RLBP1P12271 317 aa23.62■■□□□ 1.37
COL27A1-205ENST00000485397 SPP2Q13103 211 aa23.62■■□□□ 1.37
COL27A1-205ENST00000485397 NAA16Q6N069 864 aaPredicted RBP23.62■■□□□ 1.37
COL27A1-205ENST00000485397 NOL10Q9BSC4 688 aaKnown RBP23.62■■□□□ 1.37
COL27A1-205ENST00000485397 CYP2E1P05181 493 aaPredicted RBP23.61■■□□□ 1.37
COL27A1-205ENST00000485397 CCL5P13501 91 aa23.61■■□□□ 1.37
COL27A1-205ENST00000485397 CAP2P40123 477 aa23.61■■□□□ 1.37
COL27A1-205ENST00000485397 ITPRIPQ8IWB1 547 aa23.61■■□□□ 1.37
COL27A1-205ENST00000485397 FTSJ3Q8IY81 847 aaKnown RBP23.61■■□□□ 1.37
COL27A1-205ENST00000485397 ZBTB7BO15156 539 aaPredicted RBP23.6■■□□□ 1.37
COL27A1-205ENST00000485397 FLT3LGP49771 235 aa23.6■■□□□ 1.37
COL27A1-205ENST00000485397 ADGRA1Q86SQ6 560 aa23.6■■□□□ 1.37
COL27A1-205ENST00000485397 MIER1Q8N108 512 aa23.6■■□□□ 1.37
COL27A1-205ENST00000485397 ANKRD13CQ8N6S4 541 aa23.6■■□□□ 1.37
COL27A1-205ENST00000485397 ZNF280CQ8ND82 737 aa23.6■■□□□ 1.37
COL27A1-205ENST00000485397 RNF208Q9H0X6 261 aa23.6■■□□□ 1.37
COL27A1-205ENST00000485397 BAG3O95817 575 aa23.59■■□□□ 1.37
COL27A1-205ENST00000485397 ZAP70P43403 619 aa23.59■■□□□ 1.37
COL27A1-205ENST00000485397 PPP4CP60510 307 aa23.59■■□□□ 1.37
COL27A1-205ENST00000485397 UBXN2AP68543 259 aa23.59■■□□□ 1.37
COL27A1-205ENST00000485397 MAPKAPK5Q8IW41 473 aa23.59■■□□□ 1.37
COL27A1-205ENST00000485397 PROCA1Q8NCQ7 364 aaPredicted RBP23.59■■□□□ 1.37
COL27A1-205ENST00000485397 SLAIN1Q8ND83 568 aa23.59■■□□□ 1.37
COL27A1-205ENST00000485397 TGFBRAP1Q8WUH2 860 aa23.59■■□□□ 1.37
COL27A1-205ENST00000485397 CCDC8Q9H0W5 538 aaPredicted RBP23.59■■□□□ 1.37
COL27A1-205ENST00000485397 PIH1D3Q9NQM4 214 aaKnown RBP23.59■■□□□ 1.37
COL27A1-205ENST00000485397 DBNLQ9UJU6 430 aaKnown RBP23.59■■□□□ 1.37
COL27A1-205ENST00000485397 NOP58Q9Y2X3 529 aaKnown RBP23.59■■□□□ 1.37
COL27A1-205ENST00000485397 MGAMO43451 1857 aa23.59■■□□□ 1.37
COL27A1-205ENST00000485397 TNPO2O14787 897 aaKnown RBP23.58■■□□□ 1.37
COL27A1-205ENST00000485397 ADCY3O60266 1144 aa23.58■■□□□ 1.37
COL27A1-205ENST00000485397 GJB1P08034 283 aa23.58■■□□□ 1.37
COL27A1-205ENST00000485397 HMGCS2P54868 508 aa23.58■■□□□ 1.37
COL27A1-205ENST00000485397 TLR7Q9NYK1 1049 aaKnown RBP23.58■■□□□ 1.37
COL27A1-205ENST00000485397 PI4KBQ9UBF8 816 aa23.58■■□□□ 1.37
COL27A1-205ENST00000485397 HERC5Q9UII4 1024 aaKnown RBP23.58■■□□□ 1.37
COL27A1-205ENST00000485397 USP17L5A8MUK1 530 aa23.57■■□□□ 1.36
COL27A1-205ENST00000485397 ELNP15502 786 aa23.57■■□□□ 1.36
COL27A1-205ENST00000485397 PLCG2P16885 1265 aa23.57■■□□□ 1.36
COL27A1-205ENST00000485397 GJA8P48165 433 aa23.57■■□□□ 1.36
COL27A1-205ENST00000485397 NKX2-3Q8TAU0 364 aa23.57■■□□□ 1.36
COL27A1-205ENST00000485397 EAF2Q96CJ1 260 aaPredicted RBP23.57■■□□□ 1.36
COL27A1-205ENST00000485397 ZNF512BQ96KM6 892 aaPredicted RBP23.57■■□□□ 1.36
COL27A1-205ENST00000485397 UNC93B1Q9H1C4 597 aa23.57■■□□□ 1.36
COL27A1-205ENST00000485397 DHX36Q9H2U1 1008 aaKnown RBP23.57■■□□□ 1.36
COL27A1-205ENST00000485397 PNMA3Q9UL41 463 aa23.57■■□□□ 1.36
COL27A1-205ENST00000485397 JAG1P78504 1218 aa23.56■■□□□ 1.36
COL27A1-205ENST00000485397 TBC1D2Q9BYX2 928 aa23.56■■□□□ 1.36
COL27A1-205ENST00000485397 FLT1P17948 1338 aa23.56■■□□□ 1.36
COL27A1-205ENST00000485397 H0YGN5 161 aa23.55■■□□□ 1.36
COL27A1-205ENST00000485397 DYNLL1P63167 89 aaKnown RBP23.55■■□□□ 1.36
COL27A1-205ENST00000485397 SH3D19Q5HYK7 790 aa23.55■■□□□ 1.36
COL27A1-205ENST00000485397 DNAJC18Q9H819 358 aa23.55■■□□□ 1.36
COL27A1-205ENST00000485397 PALD1Q9ULE6 856 aa23.55■■□□□ 1.36
COL27A1-205ENST00000485397 INHAP05111 366 aa23.54■■□□□ 1.36
COL27A1-205ENST00000485397 IRF5Q13568 498 aa23.54■■□□□ 1.36
COL27A1-205ENST00000485397 FAM110CQ1W6H9 321 aa23.54■■□□□ 1.36
COL27A1-205ENST00000485397 SHROOM1Q2M3G4 852 aaPredicted RBP23.54■■□□□ 1.36
COL27A1-205ENST00000485397 PXYLP1Q8TE99 480 aa23.54■■□□□ 1.36
COL27A1-205ENST00000485397 U2AF1L4Q8WU68 220 aaKnown RBP23.54■■□□□ 1.36
COL27A1-205ENST00000485397 AS3MTQ9HBK9 375 aa23.54■■□□□ 1.36
COL27A1-205ENST00000485397 TAOK2Q9UL54 1235 aa23.54■■□□□ 1.36
COL27A1-205ENST00000485397 COLQQ9Y215 455 aaPredicted RBP23.54■■□□□ 1.36
COL27A1-205ENST00000485397 MAST2Q6P0Q8 1798 aa23.54■■□□□ 1.36
COL27A1-205ENST00000485397 SIPA1L1O43166 1804 aa23.54■■□□□ 1.36
COL27A1-205ENST00000485397 ATAD5Q96QE3 1844 aa23.54■■□□□ 1.36
COL27A1-205ENST00000485397 CYP7A1P22680 504 aa23.53■■□□□ 1.36
COL27A1-205ENST00000485397 PABPC4Q13310 644 aaKnown RBP eCLIP23.53■■□□□ 1.36
COL27A1-205ENST00000485397 CEP85Q6P2H3 762 aa23.53■■□□□ 1.36
COL27A1-205ENST00000485397 UBE2Q1Q7Z7E8 422 aa23.53■■□□□ 1.36
COL27A1-205ENST00000485397 FOXP4Q8IVH2 680 aaPredicted RBP23.53■■□□□ 1.36
COL27A1-205ENST00000485397 DPF3Q92784 378 aa23.53■■□□□ 1.36
COL27A1-205ENST00000485397 COA7Q96BR5 231 aa23.53■■□□□ 1.36
COL27A1-205ENST00000485397 WDR18Q9BV38 432 aa23.53■■□□□ 1.36
COL27A1-205ENST00000485397 ASCC2Q9H1I8 757 aaPredicted RBP23.53■■□□□ 1.36
COL27A1-205ENST00000485397 SAP30BPQ9UHR5 308 aaKnown RBP23.53■■□□□ 1.36
COL27A1-205ENST00000485397 MYO5AQ9Y4I1 1855 aaKnown RBP23.52■■□□□ 1.36
COL27A1-205ENST00000485397 GDF11O95390 407 aa23.52■■□□□ 1.36
COL27A1-205ENST00000485397 GCLCP48506 637 aaPredicted RBP23.52■■□□□ 1.36
COL27A1-205ENST00000485397 MTMR2Q13614 643 aa23.52■■□□□ 1.36
COL27A1-205ENST00000485397 METTL16Q86W50 562 aaKnown RBP23.52■■□□□ 1.36
COL27A1-205ENST00000485397 CRACR2BQ8N4Y2 399 aaPredicted RBP23.52■■□□□ 1.36
COL27A1-205ENST00000485397 NDUFB9Q9Y6M9 179 aa23.52■■□□□ 1.36
COL27A1-205ENST00000485397 LOC285556D6RIA3 1793 aa23.52■■□□□ 1.36
COL27A1-205ENST00000485397 DOCK3Q8IZD9 2030 aa23.51■■□□□ 1.35
COL27A1-205ENST00000485397 IDH1O75874 414 aaKnown RBP23.51■■□□□ 1.35
COL27A1-205ENST00000485397 SGPL1O95470 568 aa23.51■■□□□ 1.35
COL27A1-205ENST00000485397 ASNSP08243 561 aa23.51■■□□□ 1.35
COL27A1-205ENST00000485397 BACE1P56817 501 aa23.51■■□□□ 1.35
COL27A1-205ENST00000485397 PANK1Q8TE04 598 aa23.51■■□□□ 1.35
COL27A1-205ENST00000485397 TRIM34Q9BYJ4 488 aa23.51■■□□□ 1.35
COL27A1-205ENST00000485397 EXOC6BQ9Y2D4 811 aa23.51■■□□□ 1.35
COL27A1-205ENST00000485397 IGSF3O75054 1194 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms