RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 GRIN3BO60391 1043 aa17.2■□□□□ 0.34
LRIF1-202ENST00000485275 KDM4AO75164 1064 aa17.2■□□□□ 0.34
LRIF1-202ENST00000485275 POLR3DP05423 398 aaPredicted RBP17.2■□□□□ 0.34
LRIF1-202ENST00000485275 EPS15P42566 896 aa17.2■□□□□ 0.34
LRIF1-202ENST00000485275 RRP12Q5JTH9 1297 aaKnown RBP17.2■□□□□ 0.34
LRIF1-202ENST00000485275 Q6ZUG5 572 aa17.2■□□□□ 0.34
LRIF1-202ENST00000485275 RALYLQ86SE5 291 aaKnown RBP17.2■□□□□ 0.34
LRIF1-202ENST00000485275 CDAN1Q8IWY9 1227 aa17.2■□□□□ 0.34
LRIF1-202ENST00000485275 AGXT2Q9BYV1 514 aa17.2■□□□□ 0.34
LRIF1-202ENST00000485275 ZSWIM5Q9P217 1185 aa17.2■□□□□ 0.34
LRIF1-202ENST00000485275 COL2A1P02458 1487 aaPredicted RBP17.2■□□□□ 0.34
LRIF1-202ENST00000485275 ATRNL1Q5VV63 1379 aa17.2■□□□□ 0.34
LRIF1-202ENST00000485275 TCP10L2B9ZVM9 353 aa17.2■□□□□ 0.34
LRIF1-202ENST00000485275 PRC1O43663 620 aa17.2■□□□□ 0.34
LRIF1-202ENST00000485275 NPM3O75607 178 aaKnown RBP17.2■□□□□ 0.34
LRIF1-202ENST00000485275 HMGB1P09429 215 aaKnown RBP17.2■□□□□ 0.34
LRIF1-202ENST00000485275 GABPAQ06546 454 aa17.2■□□□□ 0.34
LRIF1-202ENST00000485275 ALDH8A1Q9H2A2 487 aaPredicted RBP17.2■□□□□ 0.34
LRIF1-202ENST00000485275 DNAJC18Q9H819 358 aa17.2■□□□□ 0.34
LRIF1-202ENST00000485275 SENP2Q9HC62 589 aa17.2■□□□□ 0.34
LRIF1-202ENST00000485275 TPCN1Q9ULQ1 816 aa17.2■□□□□ 0.34
LRIF1-202ENST00000485275 ST3GAL1Q11201 340 aa17.19■□□□□ 0.34
LRIF1-202ENST00000485275 KIF4BQ2VIQ3 1234 aa17.19■□□□□ 0.34
LRIF1-202ENST00000485275 C16orf86Q6ZW13 317 aa17.19■□□□□ 0.34
LRIF1-202ENST00000485275 RNF41Q9H4P4 317 aaPredicted RBP17.19■□□□□ 0.34
LRIF1-202ENST00000485275 ORC4O43929 436 aa17.18■□□□□ 0.34
LRIF1-202ENST00000485275 MCM5P33992 734 aa17.18■□□□□ 0.34
LRIF1-202ENST00000485275 HIRAP54198 1017 aaPredicted RBP17.18■□□□□ 0.34
LRIF1-202ENST00000485275 TRDNQ13061 729 aa17.18■□□□□ 0.34
LRIF1-202ENST00000485275 TMX3Q96JJ7 454 aa17.18■□□□□ 0.34
LRIF1-202ENST00000485275 CNNM2Q9H8M5 875 aa17.18■□□□□ 0.34
LRIF1-202ENST00000485275 VEZTQ9HBM0 779 aa17.18■□□□□ 0.34
LRIF1-202ENST00000485275 TOMM22Q9NS69 142 aa17.18■□□□□ 0.34
LRIF1-202ENST00000485275 WDR19Q8NEZ3 1342 aa17.18■□□□□ 0.34
LRIF1-202ENST00000485275 FAM196BA6NMK8 535 aa17.17■□□□□ 0.34
LRIF1-202ENST00000485275 ENTPD3O75355 529 aa17.17■□□□□ 0.34
LRIF1-202ENST00000485275 BECN1Q14457 450 aa17.17■□□□□ 0.34
LRIF1-202ENST00000485275 BRF1Q92994 677 aa17.17■□□□□ 0.34
LRIF1-202ENST00000485275 ZKSCAN3Q9BRR0 538 aa17.17■□□□□ 0.34
LRIF1-202ENST00000485275 KRT23Q9C075 422 aa17.17■□□□□ 0.34
LRIF1-202ENST00000485275 PGAP2Q9UHJ9 254 aa17.17■□□□□ 0.34
LRIF1-202ENST00000485275 GREB1LQ9C091 1923 aaPredicted RBP17.17■□□□□ 0.34
LRIF1-202ENST00000485275 RASA1P20936 1047 aa17.17■□□□□ 0.34
LRIF1-202ENST00000485275 CDK8P49336 464 aa17.17■□□□□ 0.34
LRIF1-202ENST00000485275 MMP14P50281 582 aa17.17■□□□□ 0.34
LRIF1-202ENST00000485275 ME3Q16798 604 aa17.17■□□□□ 0.34
LRIF1-202ENST00000485275 FAM47AQ5JRC9 791 aa17.17■□□□□ 0.34
LRIF1-202ENST00000485275 SH2B2O14492 632 aaPredicted RBP17.16■□□□□ 0.34
LRIF1-202ENST00000485275 NMT2O60551 498 aa17.16■□□□□ 0.34
LRIF1-202ENST00000485275 PCP11498 1178 aaKnown RBP17.16■□□□□ 0.34
LRIF1-202ENST00000485275 AMOTL1Q8IY63 956 aa17.16■□□□□ 0.34
LRIF1-202ENST00000485275 FBXL16Q8N461 479 aa17.16■□□□□ 0.34
LRIF1-202ENST00000485275 SPRYD3Q8NCJ5 442 aa17.16■□□□□ 0.34
LRIF1-202ENST00000485275 IGDCC4Q8TDY8 1250 aa17.16■□□□□ 0.34
LRIF1-202ENST00000485275 TMEM39BQ9GZU3 492 aa17.16■□□□□ 0.34
LRIF1-202ENST00000485275 ZC3H4Q9UPT8 1303 aaKnown RBP17.16■□□□□ 0.34
LRIF1-202ENST00000485275 RANBP6O60518 1105 aaKnown RBP17.15■□□□□ 0.34
LRIF1-202ENST00000485275 SHMT1P34896 483 aa17.15■□□□□ 0.34
LRIF1-202ENST00000485275 PDE4BQ07343 736 aa17.15■□□□□ 0.34
LRIF1-202ENST00000485275 APOBRQ0VD83 1088 aa17.15■□□□□ 0.34
LRIF1-202ENST00000485275 FKBP1CQ5VVH2 108 aa17.15■□□□□ 0.34
LRIF1-202ENST00000485275 LY9Q9HBG7 655 aa17.15■□□□□ 0.34
LRIF1-202ENST00000485275 TMOD2Q9NZR1 351 aa17.15■□□□□ 0.34
LRIF1-202ENST00000485275 SERPINB13Q9UIV8 391 aa17.15■□□□□ 0.34
LRIF1-202ENST00000485275 HACL1Q9UJ83 578 aa17.15■□□□□ 0.34
LRIF1-202ENST00000485275 LIMCH1Q9UPQ0 1083 aa17.15■□□□□ 0.34
LRIF1-202ENST00000485275 H7C1D1 291 aa17.15■□□□□ 0.34
LRIF1-202ENST00000485275 DTNBO60941 627 aa17.15■□□□□ 0.34
LRIF1-202ENST00000485275 SLC3A2P08195 630 aaKnown RBP17.15■□□□□ 0.34
LRIF1-202ENST00000485275 MCM2P49736 904 aa17.15■□□□□ 0.34
LRIF1-202ENST00000485275 TTC6Q86TZ1 520 aa17.15■□□□□ 0.34
LRIF1-202ENST00000485275 FAM151AQ8WW52 585 aa17.15■□□□□ 0.34
LRIF1-202ENST00000485275 ESR2Q92731 530 aa17.15■□□□□ 0.34
LRIF1-202ENST00000485275 L3MBTL3Q96JM7 780 aaPredicted RBP17.15■□□□□ 0.34
LRIF1-202ENST00000485275 EHD4Q9H223 541 aa17.15■□□□□ 0.34
LRIF1-202ENST00000485275 BRPF3Q9ULD4 1205 aa17.15■□□□□ 0.34
LRIF1-202ENST00000485275 WDR90Q96KV7 1748 aa17.14■□□□□ 0.33
LRIF1-202ENST00000485275 MYO1BO43795 1136 aa17.14■□□□□ 0.33
LRIF1-202ENST00000485275 SEC23AQ15436 765 aa17.14■□□□□ 0.33
LRIF1-202ENST00000485275 SHROOM1Q2M3G4 852 aaPredicted RBP17.14■□□□□ 0.33
LRIF1-202ENST00000485275 ZSCAN29Q8IWY8 852 aaPredicted RBP17.14■□□□□ 0.33
LRIF1-202ENST00000485275 IL27Q8NEV9 243 aa17.14■□□□□ 0.33
LRIF1-202ENST00000485275 DHX36Q9H2U1 1008 aaKnown RBP17.14■□□□□ 0.33
LRIF1-202ENST00000485275 FOXD4L1Q9NU39 408 aa17.14■□□□□ 0.33
LRIF1-202ENST00000485275 TNKSO95271 1327 aa17.13■□□□□ 0.33
LRIF1-202ENST00000485275 EVCP57679 992 aa17.13■□□□□ 0.33
LRIF1-202ENST00000485275 CUL4AQ13619 759 aa17.13■□□□□ 0.33
LRIF1-202ENST00000485275 FAM83AQ86UY5 434 aa17.13■□□□□ 0.33
LRIF1-202ENST00000485275 METTL16Q86W50 562 aaKnown RBP17.13■□□□□ 0.33
LRIF1-202ENST00000485275 ENAHQ8N8S7 591 aaPredicted RBP17.13■□□□□ 0.33
LRIF1-202ENST00000485275 NECAB1Q8N987 351 aa17.13■□□□□ 0.33
LRIF1-202ENST00000485275 TEPSINQ96N21 525 aa17.13■□□□□ 0.33
LRIF1-202ENST00000485275 CSRNP1Q96S65 589 aa17.13■□□□□ 0.33
LRIF1-202ENST00000485275 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.13■□□□□ 0.33
LRIF1-202ENST00000485275 IL17RBQ9NRM6 502 aa17.13■□□□□ 0.33
LRIF1-202ENST00000485275 ANGEL1Q9UNK9 670 aaKnown RBP17.13■□□□□ 0.33
LRIF1-202ENST00000485275 SCN4AP35499 1836 aa17.13■□□□□ 0.33
LRIF1-202ENST00000485275 POLR2AP24928 1970 aaKnown RBP17.13■□□□□ 0.33
LRIF1-202ENST00000485275 GLTPD2A6NH11 291 aa17.12■□□□□ 0.33
LRIF1-202ENST00000485275 HLA-DOAP06340 250 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms