RNA–Protein interactions for RNA: ENST00000484968.1

NEB-213, Transcript of nebulin, humanhuman

TSL 4

Gene NEB, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-213ENST00000484968 NEDD4P46934 1319 aa11.15□□□□□ -0.62
NEB-213ENST00000484968 NAV1Q8NEY1 1877 aa11.15□□□□□ -0.62
NEB-213ENST00000484968 COL2A1P02458 1487 aaPredicted RBP11.15□□□□□ -0.62
NEB-213ENST00000484968 E7EWF7 191 aa11.15□□□□□ -0.62
NEB-213ENST00000484968 EPB41L2O43491 1005 aaKnown RBP11.15□□□□□ -0.62
NEB-213ENST00000484968 PRDM1O75626 825 aa11.15□□□□□ -0.62
NEB-213ENST00000484968 ITGBL1O95965 494 aaPredicted RBP11.15□□□□□ -0.62
NEB-213ENST00000484968 POLR3DP05423 398 aaPredicted RBP11.15□□□□□ -0.62
NEB-213ENST00000484968 SHMT1P34896 483 aa11.15□□□□□ -0.62
NEB-213ENST00000484968 TSGA10IPQ3SY00 556 aa11.15□□□□□ -0.62
NEB-213ENST00000484968 MIGA2Q7L4E1 593 aa11.15□□□□□ -0.62
NEB-213ENST00000484968 C22orf23Q9BZE7 217 aa11.15□□□□□ -0.62
NEB-213ENST00000484968 NACAP1Q9BZK3 213 aa11.15□□□□□ -0.62
NEB-213ENST00000484968 TMOD2Q9NZR1 351 aa11.15□□□□□ -0.62
NEB-213ENST00000484968 ARPP21Q9UBL0 812 aaPredicted RBP11.15□□□□□ -0.62
NEB-213ENST00000484968 ZNF213O14771 459 aa11.14□□□□□ -0.63
NEB-213ENST00000484968 CDK8P49336 464 aa11.14□□□□□ -0.63
NEB-213ENST00000484968 C16orf86Q6ZW13 317 aa11.14□□□□□ -0.63
NEB-213ENST00000484968 KRT26Q7Z3Y9 468 aa11.14□□□□□ -0.63
NEB-213ENST00000484968 APOBEC3FQ8IUX4 373 aaKnown RBP11.14□□□□□ -0.63
NEB-213ENST00000484968 ZNF784Q8NCA9 323 aaPredicted RBP11.14□□□□□ -0.63
NEB-213ENST00000484968 DCPSQ96C86 337 aaKnown RBP11.14□□□□□ -0.63
NEB-213ENST00000484968 CSRNP1Q96S65 589 aa11.14□□□□□ -0.63
NEB-213ENST00000484968 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.14□□□□□ -0.63
NEB-213ENST00000484968 PHF20L1A8MW92 1017 aa11.13□□□□□ -0.63
NEB-213ENST00000484968 RASA1P20936 1047 aa11.13□□□□□ -0.63
NEB-213ENST00000484968 YY1P25490 414 aa11.13□□□□□ -0.63
NEB-213ENST00000484968 ANTXR2P58335 489 aa11.13□□□□□ -0.63
NEB-213ENST00000484968 IMMTQ16891 758 aaKnown RBP11.13□□□□□ -0.63
NEB-213ENST00000484968 AKNAD1Q5T1N1 836 aa11.13□□□□□ -0.63
NEB-213ENST00000484968 TATDN1Q6P1N9 297 aa11.13□□□□□ -0.63
NEB-213ENST00000484968 MOB2Q70IA6 237 aa11.13□□□□□ -0.63
NEB-213ENST00000484968 CYB5R4Q7L1T6 521 aa11.13□□□□□ -0.63
NEB-213ENST00000484968 LDHDQ86WU2 507 aa11.13□□□□□ -0.63
NEB-213ENST00000484968 ZSCAN29Q8IWY8 852 aaPredicted RBP11.13□□□□□ -0.63
NEB-213ENST00000484968 STAG1Q8WVM7 1258 aa11.13□□□□□ -0.63
NEB-213ENST00000484968 CDCA5Q96FF9 252 aa11.13□□□□□ -0.63
NEB-213ENST00000484968 EHD4Q9H223 541 aa11.13□□□□□ -0.63
NEB-213ENST00000484968 DHX36Q9H2U1 1008 aaKnown RBP11.13□□□□□ -0.63
NEB-213ENST00000484968 GPBP1L1Q9HC44 474 aaPredicted RBP11.13□□□□□ -0.63
NEB-213ENST00000484968 GPHNQ9NQX3 736 aaPredicted RBP11.13□□□□□ -0.63
NEB-213ENST00000484968 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.13□□□□□ -0.63
NEB-213ENST00000484968 PI4KBQ9UBF8 816 aa11.13□□□□□ -0.63
NEB-213ENST00000484968 CTNNA3Q9UI47 895 aa11.13□□□□□ -0.63
NEB-213ENST00000484968 SERPINB13Q9UIV8 391 aa11.13□□□□□ -0.63
NEB-213ENST00000484968 CLEC11AQ9Y240 323 aa11.13□□□□□ -0.63
NEB-213ENST00000484968 POLR2AP24928 1970 aaKnown RBP11.12□□□□□ -0.63
NEB-213ENST00000484968 MYH1P12882 1939 aa11.12□□□□□ -0.63
NEB-213ENST00000484968 B4E1Z4 1266 aa11.12□□□□□ -0.63
NEB-213ENST00000484968 USP2O75604 605 aaPredicted RBP11.12□□□□□ -0.63
NEB-213ENST00000484968 AKR1B1P15121 316 aa11.12□□□□□ -0.63
NEB-213ENST00000484968 TNNI2P48788 182 aa11.12□□□□□ -0.63
NEB-213ENST00000484968 TNFAIP1Q13829 316 aa11.12□□□□□ -0.63
NEB-213ENST00000484968 FAM47AQ5JRC9 791 aa11.12□□□□□ -0.63
NEB-213ENST00000484968 CDC37L1Q7L3B6 337 aa11.12□□□□□ -0.63
NEB-213ENST00000484968 CHST3Q7LGC8 479 aa11.12□□□□□ -0.63
NEB-213ENST00000484968 TTC6Q86TZ1 520 aa11.12□□□□□ -0.63
NEB-213ENST00000484968 FOXP4Q8IVH2 680 aaPredicted RBP11.12□□□□□ -0.63
NEB-213ENST00000484968 SULF1Q8IWU6 871 aa11.12□□□□□ -0.63
NEB-213ENST00000484968 MB21D2Q8IYB1 491 aaPredicted RBP11.12□□□□□ -0.63
NEB-213ENST00000484968 TCEANC2Q96MN5 208 aa11.12□□□□□ -0.63
NEB-213ENST00000484968 SENP2Q9HC62 589 aa11.12□□□□□ -0.63
NEB-213ENST00000484968 LAMA4Q16363 1823 aa11.12□□□□□ -0.63
NEB-213ENST00000484968 LAMB1P07942 1786 aa11.11□□□□□ -0.63
NEB-213ENST00000484968 ORC4O43929 436 aa11.11□□□□□ -0.63
NEB-213ENST00000484968 TBC1D12O60347 775 aa11.11□□□□□ -0.63
NEB-213ENST00000484968 NMT2O60551 498 aa11.11□□□□□ -0.63
NEB-213ENST00000484968 GUCY1A2P33402 732 aa11.11□□□□□ -0.63
NEB-213ENST00000484968 EXOSC10Q01780 885 aaKnown RBP11.11□□□□□ -0.63
NEB-213ENST00000484968 CST9Q5W186 159 aa11.11□□□□□ -0.63
NEB-213ENST00000484968 CHADLQ6NUI6 762 aa11.11□□□□□ -0.63
NEB-213ENST00000484968 CLEC10AQ8IUN9 316 aa11.11□□□□□ -0.63
NEB-213ENST00000484968 SIAH1Q8IUQ4 282 aa11.11□□□□□ -0.63
NEB-213ENST00000484968 JAKMIP1Q96N16 626 aaKnown RBP11.11□□□□□ -0.63
NEB-213ENST00000484968 UPF3BQ9BZI7 483 aaKnown RBP11.11□□□□□ -0.63
NEB-213ENST00000484968 ZSWIM6Q9HCJ5 1215 aa11.11□□□□□ -0.63
NEB-213ENST00000484968 IL17RBQ9NRM6 502 aa11.11□□□□□ -0.63
NEB-213ENST00000484968 ZSWIM5Q9P217 1185 aa11.11□□□□□ -0.63
NEB-213ENST00000484968 KDM4AO75164 1064 aa11.1□□□□□ -0.63
NEB-213ENST00000484968 GDF11O95390 407 aa11.1□□□□□ -0.63
NEB-213ENST00000484968 CD2BP2O95400 341 aaKnown RBP11.1□□□□□ -0.63
NEB-213ENST00000484968 INPP5BP32019 993 aa11.1□□□□□ -0.63
NEB-213ENST00000484968 ANAPC15P60006 121 aa11.1□□□□□ -0.63
NEB-213ENST00000484968 PRKG1Q13976 671 aa11.1□□□□□ -0.63
NEB-213ENST00000484968 MFSD6Q6ZSS7 791 aa11.1□□□□□ -0.63
NEB-213ENST00000484968 CCDC84Q86UT8 332 aaPredicted RBP11.1□□□□□ -0.63
NEB-213ENST00000484968 DDRGK1Q96HY6 314 aa11.1□□□□□ -0.63
NEB-213ENST00000484968 NEK1Q96PY6 1258 aa11.1□□□□□ -0.63
NEB-213ENST00000484968 ZKSCAN3Q9BRR0 538 aa11.1□□□□□ -0.63
NEB-213ENST00000484968 LRRC2Q9BYS8 371 aa11.1□□□□□ -0.63
NEB-213ENST00000484968 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.1□□□□□ -0.63
NEB-213ENST00000484968 TSHZ2Q9NRE2 1034 aa11.1□□□□□ -0.63
NEB-213ENST00000484968 ZNF112Q9UJU3 913 aa11.1□□□□□ -0.63
NEB-213ENST00000484968 PPP2R3BQ9Y5P8 575 aa11.1□□□□□ -0.63
NEB-213ENST00000484968 IGKV6D-41A0A0C4DH26 115 aa11.09□□□□□ -0.63
NEB-213ENST00000484968 HLA-DOAP06340 250 aa11.09□□□□□ -0.63
NEB-213ENST00000484968 TFAP4Q01664 338 aa11.09□□□□□ -0.63
NEB-213ENST00000484968 RRP12Q5JTH9 1297 aaKnown RBP11.09□□□□□ -0.63
NEB-213ENST00000484968 RNF20Q5VTR2 975 aa11.09□□□□□ -0.63
NEB-213ENST00000484968 RCSD1Q6JBY9 416 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms