RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 LEFTY1O75610 366 aa6.36□□□□□ -1.39
SPTA1-206ENST00000484520 SLFN14P0C7P3 912 aa6.36□□□□□ -1.39
SPTA1-206ENST00000484520 ZNF157P51786 506 aaPredicted RBP6.36□□□□□ -1.39
SPTA1-206ENST00000484520 ID3Q02535 119 aa6.36□□□□□ -1.39
SPTA1-206ENST00000484520 AOC3Q16853 763 aa6.36□□□□□ -1.39
SPTA1-206ENST00000484520 SMYD4Q8IYR2 804 aaPredicted RBP6.36□□□□□ -1.39
SPTA1-206ENST00000484520 ATXN3LQ9H3M9 355 aa6.36□□□□□ -1.39
SPTA1-206ENST00000484520 NPHS2Q9NP85 383 aa6.36□□□□□ -1.39
SPTA1-206ENST00000484520 KIF14Q15058 1648 aa6.36□□□□□ -1.39
SPTA1-206ENST00000484520 CDK13Q14004 1512 aaKnown RBP6.35□□□□□ -1.39
SPTA1-206ENST00000484520 PHLDB1Q86UU1 1377 aa6.35□□□□□ -1.39
SPTA1-206ENST00000484520 CARNS1A5YM72 827 aa6.35□□□□□ -1.39
SPTA1-206ENST00000484520 ARID3CA6NKF2 412 aa6.35□□□□□ -1.39
SPTA1-206ENST00000484520 ZNF862O60290 1169 aa6.35□□□□□ -1.39
SPTA1-206ENST00000484520 RNGTTO60942 597 aaKnown RBP6.35□□□□□ -1.39
SPTA1-206ENST00000484520 ZEB1P37275 1124 aaPredicted RBP6.35□□□□□ -1.39
SPTA1-206ENST00000484520 IFI16Q16666 785 aaKnown RBP6.35□□□□□ -1.39
SPTA1-206ENST00000484520 ARHGAP27Q6ZUM4 889 aa6.35□□□□□ -1.39
SPTA1-206ENST00000484520 DISC1Q9NRI5 854 aa6.35□□□□□ -1.39
SPTA1-206ENST00000484520 ADCY10Q96PN6 1610 aa6.35□□□□□ -1.39
SPTA1-206ENST00000484520 TCOF1Q13428 1488 aaKnown RBP6.34□□□□□ -1.39
SPTA1-206ENST00000484520 NEFLP07196 543 aa6.34□□□□□ -1.39
SPTA1-206ENST00000484520 OXCT1P55809 520 aa6.34□□□□□ -1.39
SPTA1-206ENST00000484520 PTPN12Q05209 780 aaKnown RBP6.34□□□□□ -1.39
SPTA1-206ENST00000484520 ORC1Q13415 861 aa6.34□□□□□ -1.39
SPTA1-206ENST00000484520 TTLL4Q14679 1199 aa6.34□□□□□ -1.39
SPTA1-206ENST00000484520 HRASLS5Q96KN8 279 aa6.34□□□□□ -1.39
SPTA1-206ENST00000484520 SLC38A3Q99624 504 aa6.34□□□□□ -1.39
SPTA1-206ENST00000484520 ABCB6Q9NP58 842 aa6.34□□□□□ -1.39
SPTA1-206ENST00000484520 BRPF3Q9ULD4 1205 aa6.34□□□□□ -1.39
SPTA1-206ENST00000484520 PLAGL2Q9UPG8 496 aa6.34□□□□□ -1.39
SPTA1-206ENST00000484520 AKNAQ7Z591 1439 aa6.33□□□□□ -1.4
SPTA1-206ENST00000484520 CPNE3O75131 537 aaKnown RBP6.33□□□□□ -1.4
SPTA1-206ENST00000484520 CEACAM5P06731 702 aa6.33□□□□□ -1.4
SPTA1-206ENST00000484520 HCLS1P14317 486 aaPredicted RBP6.33□□□□□ -1.4
SPTA1-206ENST00000484520 FAAP100Q0VG06 881 aa6.33□□□□□ -1.4
SPTA1-206ENST00000484520 DUSP23Q9BVJ7 150 aa6.33□□□□□ -1.4
SPTA1-206ENST00000484520 MKNK2Q9HBH9 465 aa6.33□□□□□ -1.4
SPTA1-206ENST00000484520 PCDHGC5Q9Y5F6 944 aa6.33□□□□□ -1.4
SPTA1-206ENST00000484520 PLEKHH2Q8IVE3 1493 aa6.33□□□□□ -1.4
SPTA1-206ENST00000484520 TTBK1Q5TCY1 1321 aaPredicted RBP6.32□□□□□ -1.4
SPTA1-206ENST00000484520 MAGI3Q5TCQ9 1506 aa6.32□□□□□ -1.4
SPTA1-206ENST00000484520 ARAP3Q8WWN8 1544 aa6.32□□□□□ -1.4
SPTA1-206ENST00000484520 TMEM265A0A087WTH1 108 aa6.32□□□□□ -1.4
SPTA1-206ENST00000484520 TMEM238LA0A1B0GVL6 79 aa6.32□□□□□ -1.4
SPTA1-206ENST00000484520 KIF4BQ2VIQ3 1234 aa6.32□□□□□ -1.4
SPTA1-206ENST00000484520 RPS26P11Q5JNZ5 115 aaPredicted RBP6.32□□□□□ -1.4
SPTA1-206ENST00000484520 ANGEL2Q5VTE6 544 aaKnown RBP6.32□□□□□ -1.4
SPTA1-206ENST00000484520 PCOLCE2Q9UKZ9 415 aa6.32□□□□□ -1.4
SPTA1-206ENST00000484520 ITSN2Q9NZM3 1697 aa6.32□□□□□ -1.4
SPTA1-206ENST00000484520 ERCC6L2Q5T890 1561 aa6.31□□□□□ -1.4
SPTA1-206ENST00000484520 CLSPNQ9HAW4 1339 aa6.31□□□□□ -1.4
SPTA1-206ENST00000484520 WDR7Q9Y4E6 1490 aa6.31□□□□□ -1.4
SPTA1-206ENST00000484520 ICMTO60725 284 aa6.31□□□□□ -1.4
SPTA1-206ENST00000484520 GADD45BO75293 160 aaPredicted RBP6.31□□□□□ -1.4
SPTA1-206ENST00000484520 GSTP1P09211 210 aaKnown RBP6.31□□□□□ -1.4
SPTA1-206ENST00000484520 ITIH2P19823 946 aa6.31□□□□□ -1.4
SPTA1-206ENST00000484520 MESP2Q0VG99 397 aa6.31□□□□□ -1.4
SPTA1-206ENST00000484520 PRPF40BQ6NWY9 871 aaKnown RBP6.31□□□□□ -1.4
SPTA1-206ENST00000484520 SLC23A3Q6PIS1 610 aa6.31□□□□□ -1.4
SPTA1-206ENST00000484520 FAM84AQ96KN4 292 aa6.31□□□□□ -1.4
SPTA1-206ENST00000484520 PRDM7Q9NQW5 492 aa6.31□□□□□ -1.4
SPTA1-206ENST00000484520 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.31□□□□□ -1.4
SPTA1-206ENST00000484520 CFDP1Q9UEE9 299 aaPredicted RBP6.31□□□□□ -1.4
SPTA1-206ENST00000484520 ROCK1Q13464 1354 aa6.31□□□□□ -1.4
SPTA1-206ENST00000484520 GPATCH8Q9UKJ3 1502 aaKnown RBP6.3□□□□□ -1.4
SPTA1-206ENST00000484520 ABCC10Q5T3U5 1492 aa6.3□□□□□ -1.4
SPTA1-206ENST00000484520 PTPN23Q9H3S7 1636 aa6.3□□□□□ -1.4
SPTA1-206ENST00000484520 LRRC10BA6NIK2 292 aa6.3□□□□□ -1.4
SPTA1-206ENST00000484520 NEFMP07197 916 aa6.3□□□□□ -1.4
SPTA1-206ENST00000484520 FAM50AQ14320 339 aaKnown RBP6.3□□□□□ -1.4
SPTA1-206ENST00000484520 ECM1Q16610 540 aa6.3□□□□□ -1.4
SPTA1-206ENST00000484520 TOP6BLQ8N6T0 577 aa6.3□□□□□ -1.4
SPTA1-206ENST00000484520 CCDC74AQ96AQ1 378 aa6.3□□□□□ -1.4
SPTA1-206ENST00000484520 KRT82Q9NSB4 513 aa6.3□□□□□ -1.4
SPTA1-206ENST00000484520 KIAA1107Q9UPP5 1409 aa6.3□□□□□ -1.4
SPTA1-206ENST00000484520 LRRIQ1Q96JM4 1722 aa6.3□□□□□ -1.4
SPTA1-206ENST00000484520 SHANK2Q9UPX8 1470 aa6.29□□□□□ -1.4
SPTA1-206ENST00000484520 HFM1A2PYH4 1435 aa6.29□□□□□ -1.4
SPTA1-206ENST00000484520 H3BRB1 525 aa6.29□□□□□ -1.4
SPTA1-206ENST00000484520 PPP1R15AO75807 674 aaPredicted RBP6.29□□□□□ -1.4
SPTA1-206ENST00000484520 ZSWIM9Q86XI8 627 aa6.29□□□□□ -1.4
SPTA1-206ENST00000484520 FLAD1Q8NFF5 587 aa6.29□□□□□ -1.4
SPTA1-206ENST00000484520 KCNB2Q92953 911 aa6.29□□□□□ -1.4
SPTA1-206ENST00000484520 ISL2Q96A47 359 aa6.29□□□□□ -1.4
SPTA1-206ENST00000484520 TUT1Q9H6E5 874 aaKnown RBP6.29□□□□□ -1.4
SPTA1-206ENST00000484520 SSU72Q9NP77 194 aaKnown RBP6.29□□□□□ -1.4
SPTA1-206ENST00000484520 EGFL7Q9UHF1 273 aa6.29□□□□□ -1.4
SPTA1-206ENST00000484520 ZCCHC11Q5TAX3 1644 aaKnown RBP6.28□□□□□ -1.4
SPTA1-206ENST00000484520 NDUFB5O43674 189 aa6.28□□□□□ -1.4
SPTA1-206ENST00000484520 HNRNPUQ00839 825 aaKnown RBP eCLIP6.28□□□□□ -1.4
SPTA1-206ENST00000484520 PDE3BQ13370 1112 aa6.28□□□□□ -1.4
SPTA1-206ENST00000484520 MLANAQ16655 118 aa6.28□□□□□ -1.4
SPTA1-206ENST00000484520 PDZD3Q86UT5 571 aa6.28□□□□□ -1.4
SPTA1-206ENST00000484520 GLYCTKQ8IVS8 523 aa6.28□□□□□ -1.4
SPTA1-206ENST00000484520 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.28□□□□□ -1.4
SPTA1-206ENST00000484520 HEXIM2Q96MH2 286 aaKnown RBP6.28□□□□□ -1.4
SPTA1-206ENST00000484520 FAM129BQ96TA1 746 aa6.28□□□□□ -1.4
SPTA1-206ENST00000484520 TNKS2Q9H2K2 1166 aa6.28□□□□□ -1.4
SPTA1-206ENST00000484520 TRAK1Q9UPV9 953 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms