RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 PRDM10Q9NQV6 1147 aa8.51□□□□□ -1.05
SCAF11-207ENST00000484275 TMEM265A0A087WTH1 108 aa8.5□□□□□ -1.05
SCAF11-207ENST00000484275 FANCGO15287 622 aa8.5□□□□□ -1.05
SCAF11-207ENST00000484275 EOMESO95936 686 aa8.5□□□□□ -1.05
SCAF11-207ENST00000484275 ARHGAP27Q6ZUM4 889 aa8.5□□□□□ -1.05
SCAF11-207ENST00000484275 POU5F2Q8N7G0 328 aa8.5□□□□□ -1.05
SCAF11-207ENST00000484275 SPG7Q9UQ90 795 aa8.5□□□□□ -1.05
SCAF11-207ENST00000484275 KRTAP4-8A0A0G2JLE6 195 aa8.49□□□□□ -1.05
SCAF11-207ENST00000484275 LRRC14Q15048 493 aa8.49□□□□□ -1.05
SCAF11-207ENST00000484275 LRFN4Q6PJG9 635 aa8.49□□□□□ -1.05
SCAF11-207ENST00000484275 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.49□□□□□ -1.05
SCAF11-207ENST00000484275 SPACA3Q8IXA5 215 aa8.49□□□□□ -1.05
SCAF11-207ENST00000484275 LRRN4CLQ8ND94 238 aa8.49□□□□□ -1.05
SCAF11-207ENST00000484275 RC3H2Q9HBD1 1191 aaKnown RBP8.49□□□□□ -1.05
SCAF11-207ENST00000484275 PICK1Q9NRD5 415 aa8.49□□□□□ -1.05
SCAF11-207ENST00000484275 FAM8A1Q9UBU6 413 aa8.49□□□□□ -1.05
SCAF11-207ENST00000484275 CYP8B1Q9UNU6 501 aa8.49□□□□□ -1.05
SCAF11-207ENST00000484275 RBAK-RBAKDNI3L0D1 243 aa8.48□□□□□ -1.05
SCAF11-207ENST00000484275 CDK8P49336 464 aa8.48□□□□□ -1.05
SCAF11-207ENST00000484275 ATP2B2Q01814 1243 aa8.48□□□□□ -1.05
SCAF11-207ENST00000484275 NKPD1Q17RQ9 610 aa8.48□□□□□ -1.05
SCAF11-207ENST00000484275 SCARA3Q6AZY7 606 aa8.48□□□□□ -1.05
SCAF11-207ENST00000484275 GAL3ST3Q96A11 431 aa8.48□□□□□ -1.05
SCAF11-207ENST00000484275 FBRSQ9HAH7 460 aa8.48□□□□□ -1.05
SCAF11-207ENST00000484275 PRDM7Q9NQW5 492 aa8.48□□□□□ -1.05
SCAF11-207ENST00000484275 RNF19AQ9NV58 838 aa8.48□□□□□ -1.05
SCAF11-207ENST00000484275 IGF2BP3O00425 579 aaKnown RBP eCLIP8.47□□□□□ -1.05
SCAF11-207ENST00000484275 LDHBP07195 334 aaKnown RBP8.47□□□□□ -1.05
SCAF11-207ENST00000484275 ARMCX6Q7L4S7 300 aa8.47□□□□□ -1.05
SCAF11-207ENST00000484275 ATG4DQ86TL0 474 aaPredicted RBP8.47□□□□□ -1.05
SCAF11-207ENST00000484275 PI4K2BQ8TCG2 481 aa8.47□□□□□ -1.05
SCAF11-207ENST00000484275 PLPPR2Q96GM1 343 aa8.47□□□□□ -1.05
SCAF11-207ENST00000484275 GTF2IRD1Q9UHL9 959 aa8.47□□□□□ -1.05
SCAF11-207ENST00000484275 CNTNAP4Q9C0A0 1308 aa8.47□□□□□ -1.05
SCAF11-207ENST00000484275 SLITRK5O94991 958 aa8.46□□□□□ -1.06
SCAF11-207ENST00000484275 C8AP07357 584 aa8.46□□□□□ -1.06
SCAF11-207ENST00000484275 CYFIP1Q7L576 1253 aa8.46□□□□□ -1.06
SCAF11-207ENST00000484275 ELMO3Q96BJ8 720 aa8.46□□□□□ -1.06
SCAF11-207ENST00000484275 SNX11Q9Y5W9 270 aa8.46□□□□□ -1.06
SCAF11-207ENST00000484275 PRAMEF27A3QJZ7 478 aa8.45□□□□□ -1.06
SCAF11-207ENST00000484275 NKG7Q16617 165 aa8.45□□□□□ -1.06
SCAF11-207ENST00000484275 ANGEL2Q5VTE6 544 aaKnown RBP8.45□□□□□ -1.06
SCAF11-207ENST00000484275 SV2BQ7L1I2 683 aa8.45□□□□□ -1.06
SCAF11-207ENST00000484275 CDC37L1Q7L3B6 337 aa8.45□□□□□ -1.06
SCAF11-207ENST00000484275 BIN1O00499 593 aa8.44□□□□□ -1.06
SCAF11-207ENST00000484275 LRIG2O94898 1065 aa8.44□□□□□ -1.06
SCAF11-207ENST00000484275 SLBPQ14493 270 aaKnown RBP eCLIP8.44□□□□□ -1.06
SCAF11-207ENST00000484275 ZNF507Q8TCN5 953 aa8.44□□□□□ -1.06
SCAF11-207ENST00000484275 TTF2Q9UNY4 1162 aaKnown RBP8.44□□□□□ -1.06
SCAF11-207ENST00000484275 PRR33A8MZF0 331 aa8.43□□□□□ -1.06
SCAF11-207ENST00000484275 TTBK2Q6IQ55 1244 aa8.43□□□□□ -1.06
SCAF11-207ENST00000484275 SLC23A3Q6PIS1 610 aa8.43□□□□□ -1.06
SCAF11-207ENST00000484275 GNA15P30679 374 aa8.42□□□□□ -1.06
SCAF11-207ENST00000484275 JAG1P78504 1218 aa8.42□□□□□ -1.06
SCAF11-207ENST00000484275 FZD5Q13467 585 aa8.42□□□□□ -1.06
SCAF11-207ENST00000484275 WIPI1Q5MNZ9 446 aaPredicted RBP8.42□□□□□ -1.06
SCAF11-207ENST00000484275 ZNF648Q5T619 568 aaPredicted RBP8.42□□□□□ -1.06
SCAF11-207ENST00000484275 KCT2Q8NC54 265 aa8.42□□□□□ -1.06
SCAF11-207ENST00000484275 RIN3Q8TB24 985 aa8.42□□□□□ -1.06
SCAF11-207ENST00000484275 ASB11Q8WXH4 323 aa8.42□□□□□ -1.06
SCAF11-207ENST00000484275 FAM168AQ92567 244 aa8.42□□□□□ -1.06
SCAF11-207ENST00000484275 TRAIPQ9BWF2 469 aa8.42□□□□□ -1.06
SCAF11-207ENST00000484275 WNT10AQ9GZT5 417 aa8.42□□□□□ -1.06
SCAF11-207ENST00000484275 PRDM5Q9NQX1 630 aaPredicted RBP8.42□□□□□ -1.06
SCAF11-207ENST00000484275 PCDHB5Q9Y5E4 795 aa8.42□□□□□ -1.06
SCAF11-207ENST00000484275 PITPNM2Q9BZ72 1349 aa8.42□□□□□ -1.06
SCAF11-207ENST00000484275 EIF4BP23588 611 aaKnown RBP8.41□□□□□ -1.06
SCAF11-207ENST00000484275 ZP2Q05996 745 aa8.41□□□□□ -1.06
SCAF11-207ENST00000484275 IKZF1Q13422 519 aa8.41□□□□□ -1.06
SCAF11-207ENST00000484275 HDXQ7Z353 690 aa8.41□□□□□ -1.06
SCAF11-207ENST00000484275 FOXQ1Q9C009 403 aa8.41□□□□□ -1.06
SCAF11-207ENST00000484275 MAPK8IP1Q9UQF2 711 aa8.41□□□□□ -1.06
SCAF11-207ENST00000484275 ARID1BQ8NFD5 2236 aaPredicted RBP8.41□□□□□ -1.06
SCAF11-207ENST00000484275 GNAT3A8MTJ3 354 aa8.4□□□□□ -1.06
SCAF11-207ENST00000484275 PRPF40AO75400 957 aaKnown RBP8.4□□□□□ -1.06
SCAF11-207ENST00000484275 SEPT6Q14141 434 aa8.4□□□□□ -1.06
SCAF11-207ENST00000484275 FRMD6Q96NE9 622 aa8.4□□□□□ -1.06
SCAF11-207ENST00000484275 SEMA3GQ9NS98 782 aa8.4□□□□□ -1.06
SCAF11-207ENST00000484275 SNCAIPQ9Y6H5 919 aa8.4□□□□□ -1.06
SCAF11-207ENST00000484275 CAP2P40123 477 aa8.39□□□□□ -1.07
SCAF11-207ENST00000484275 CLCN7P51798 805 aa8.39□□□□□ -1.07
SCAF11-207ENST00000484275 CCDC85BQ15834 202 aaPredicted RBP8.39□□□□□ -1.07
SCAF11-207ENST00000484275 FLAD1Q8NFF5 587 aa8.39□□□□□ -1.07
SCAF11-207ENST00000484275 HSPA12BQ96MM6 686 aa8.39□□□□□ -1.07
SCAF11-207ENST00000484275 MIPEPQ99797 713 aa8.39□□□□□ -1.07
SCAF11-207ENST00000484275 DUSP9Q99956 384 aaKnown RBP8.39□□□□□ -1.07
SCAF11-207ENST00000484275 AK5Q9Y6K8 562 aa8.39□□□□□ -1.07
SCAF11-207ENST00000484275 GFRA2O00451 464 aa8.38□□□□□ -1.07
SCAF11-207ENST00000484275 GRK4P32298 578 aa8.38□□□□□ -1.07
SCAF11-207ENST00000484275 ETF1P62495 437 aaKnown RBP8.38□□□□□ -1.07
SCAF11-207ENST00000484275 ZNF865P0CJ78 1059 aaPredicted RBP8.37□□□□□ -1.07
SCAF11-207ENST00000484275 RPS26P62854 115 aaKnown RBP8.37□□□□□ -1.07
SCAF11-207ENST00000484275 MAP3K11Q16584 847 aa8.37□□□□□ -1.07
SCAF11-207ENST00000484275 PRAMEF13Q5VWM6 474 aa8.37□□□□□ -1.07
SCAF11-207ENST00000484275 HID1Q8IV36 788 aa8.37□□□□□ -1.07
SCAF11-207ENST00000484275 TMEM40Q8WWA1 233 aa8.37□□□□□ -1.07
SCAF11-207ENST00000484275 ATP13A1Q9HD20 1204 aa8.37□□□□□ -1.07
SCAF11-207ENST00000484275 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.37□□□□□ -1.07
SCAF11-207ENST00000484275 TPX2Q9ULW0 747 aaKnown RBP8.37□□□□□ -1.07
SCAF11-207ENST00000484275 CTNND2Q9UQB3 1225 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms