RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 NFE2L2Q16236 605 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 CCDC93Q567U6 631 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 PARD6BQ9BYG5 372 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 CHGBP05060 677 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 CDC25BP30305 580 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 HAND2P61296 217 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 MYO1EQ12965 1108 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 HELBQ8NG08 1087 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-207ENST00000483888 MIS12Q9H081 205 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 NCOA1Q15788 1441 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 BRAPQ7Z569 592 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 ARHGAP18Q8N392 663 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 NOC4LQ9BVI4 516 aaKnown RBP11.35□□□□□ -0.59
COL12A1-207ENST00000483888 KSR1Q8IVT5 923 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 FLCNQ8NFG4 579 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 HINFPQ9BQA5 517 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 NUP58Q9BVL2 599 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 WWC3Q9ULE0 1092 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 SCP2P22307 547 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 RBM26Q5T8P6 1007 aaKnown RBP11.35□□□□□ -0.59
COL12A1-207ENST00000483888 UTP6Q9NYH9 597 aaKnown RBP11.35□□□□□ -0.59
COL12A1-207ENST00000483888 UBAP1Q9NZ09 502 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 PTPRCP08575 1304 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 PSDA5PKW4 1024 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-207ENST00000483888 IFNAR2P48551 515 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 PPP4R1Q8TF05 950 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.35□□□□□ -0.59
COL12A1-207ENST00000483888 EVA1CP58658 441 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 PSMC1P62191 440 aaKnown RBP11.35□□□□□ -0.59
COL12A1-207ENST00000483888 CASP8Q14790 479 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 TBC1D1Q86TI0 1168 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-207ENST00000483888 TTLL11Q8NHH1 800 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 CCT6BQ92526 530 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 BATF3Q9NR55 127 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 FYCO1Q9BQS8 1478 aa11.35□□□□□ -0.59
COL12A1-207ENST00000483888 ABCC11Q96J66 1382 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 TBC1D8BQ0IIM8 1120 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 CCDC15Q0P6D6 951 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 KCNV2Q8TDN2 545 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 LEO1Q8WVC0 666 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-207ENST00000483888 ZBTB10Q96DT7 871 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 NRBP1Q9UHY1 535 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 CARMIL2Q6F5E8 1435 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 TADA3O75528 432 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 CNGA1P29973 690 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 KRT9P35527 623 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 CWF19L2Q2TBE0 894 aaKnown RBP11.34□□□□□ -0.59
COL12A1-207ENST00000483888 RHBDL2Q9NX52 303 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 DONSONQ9NYP3 566 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 TMEM232C9JQI7 657 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 ZSCAN20P17040 1043 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-207ENST00000483888 LAMB3Q13751 1172 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 IFIH1Q9BYX4 1025 aaKnown RBP11.34□□□□□ -0.59
COL12A1-207ENST00000483888 ECHDC1Q9NTX5 307 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 STXBP3O00186 592 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 SPOPO43791 374 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 DEUP1Q05D60 604 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 RPS6KA1Q15418 735 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 FBXW10Q5XX13 1052 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 OLFM3Q96PB7 478 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 KIF9Q9HAQ2 790 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 MCF2LO15068 1137 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 CCDC89Q8N998 374 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 WDR75Q8IWA0 830 aaKnown RBP11.34□□□□□ -0.59
COL12A1-207ENST00000483888 EPS15L1Q9UBC2 864 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 LRRC8CQ8TDW0 803 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 CTNND1O60716 968 aaKnown RBP11.34□□□□□ -0.59
COL12A1-207ENST00000483888 DNAJC6O75061 913 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 PDE1AP54750 535 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 MRPS9P82933 396 aaKnown RBP11.34□□□□□ -0.59
COL12A1-207ENST00000483888 BEND3Q5T5X7 828 aa11.34□□□□□ -0.59
COL12A1-207ENST00000483888 NAIF1Q69YI7 327 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-207ENST00000483888 MAK16Q9BXY0 300 aaKnown RBP11.34□□□□□ -0.59
COL12A1-207ENST00000483888 ZMYND10O75800 440 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 SH2D4AQ9H788 454 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 AATFQ9NY61 560 aaKnown RBP eCLIP11.33□□□□□ -0.6
COL12A1-207ENST00000483888 SCHIP1Q9P0W5 487 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-207ENST00000483888 ZBBXA8MT70 800 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 MSH2P43246 934 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 RAPGEF1Q13905 1077 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 CCDC105Q8IYK2 499 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 GFM2Q969S9 779 aaKnown RBP11.33□□□□□ -0.6
COL12A1-207ENST00000483888 TEKT1Q969V4 418 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 KRT14P02533 472 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 OLFML2BQ68BL8 750 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 TBCAO75347 108 aaKnown RBP11.33□□□□□ -0.6
COL12A1-207ENST00000483888 RCN2Q14257 317 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 RNF41Q9H4P4 317 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-207ENST00000483888 GNAT2P19087 354 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 NR1D1P20393 614 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 KCNA4P22459 653 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 MRPS15P82914 257 aaKnown RBP11.33□□□□□ -0.6
COL12A1-207ENST00000483888 FNBP4Q8N3X1 1017 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-207ENST00000483888 ZNF202O95125 648 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 SLC44A4Q53GD3 710 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 KRT80Q6KB66 452 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 CTAGE3PQ8IX95 158 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 TRIML2Q8N7C3 387 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 CDC23Q9UJX2 597 aa11.33□□□□□ -0.6
COL12A1-207ENST00000483888 MKL2Q9ULH7 1088 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms