RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 MTFR1Q15390 333 aa20.32■□□□□ 0.84
RAB11FIP3-209ENST00000483002 SMCR8Q8TEV9 937 aaPredicted RBP20.32■□□□□ 0.84
RAB11FIP3-209ENST00000483002 BIN2Q9UBW5 565 aaPredicted RBP20.32■□□□□ 0.84
RAB11FIP3-209ENST00000483002 SLC45A1Q9Y2W3 748 aa20.32■□□□□ 0.84
RAB11FIP3-209ENST00000483002 NOP58Q9Y2X3 529 aaKnown RBP20.32■□□□□ 0.84
RAB11FIP3-209ENST00000483002 BRCA2P51587 3418 aa20.32■□□□□ 0.84
RAB11FIP3-209ENST00000483002 DOCK1Q14185 1865 aa20.31■□□□□ 0.84
RAB11FIP3-209ENST00000483002 ZAP70P43403 619 aa20.31■□□□□ 0.84
RAB11FIP3-209ENST00000483002 PRKCZQ05513 592 aa20.31■□□□□ 0.84
RAB11FIP3-209ENST00000483002 CCDC8Q9H0W5 538 aaPredicted RBP20.31■□□□□ 0.84
RAB11FIP3-209ENST00000483002 PLCG2P16885 1265 aa20.3■□□□□ 0.84
RAB11FIP3-209ENST00000483002 CAP2P40123 477 aa20.3■□□□□ 0.84
RAB11FIP3-209ENST00000483002 RRP1BQ14684 758 aaKnown RBP20.3■□□□□ 0.84
RAB11FIP3-209ENST00000483002 TGFBRAP1Q8WUH2 860 aa20.3■□□□□ 0.84
RAB11FIP3-209ENST00000483002 ZNF512BQ96KM6 892 aaPredicted RBP20.3■□□□□ 0.84
RAB11FIP3-209ENST00000483002 PI4KBQ9UBF8 816 aa20.3■□□□□ 0.84
RAB11FIP3-209ENST00000483002 DBNLQ9UJU6 430 aaKnown RBP20.3■□□□□ 0.84
RAB11FIP3-209ENST00000483002 GABRQQ9UN88 632 aa20.3■□□□□ 0.84
RAB11FIP3-209ENST00000483002 AGTPBP1Q9UPW5 1226 aa20.3■□□□□ 0.84
RAB11FIP3-209ENST00000483002 PHIPQ8WWQ0 1821 aa20.3■□□□□ 0.84
RAB11FIP3-209ENST00000483002 PTPRFP10586 1907 aa20.29■□□□□ 0.84
RAB11FIP3-209ENST00000483002 PPP4CP60510 307 aa20.29■□□□□ 0.84
RAB11FIP3-209ENST00000483002 TREML2Q5T2D2 321 aa20.29■□□□□ 0.84
RAB11FIP3-209ENST00000483002 ADGRA1Q86SQ6 560 aa20.29■□□□□ 0.84
RAB11FIP3-209ENST00000483002 MAPKAPK5Q8IW41 473 aa20.29■□□□□ 0.84
RAB11FIP3-209ENST00000483002 ZNF280CQ8ND82 737 aa20.29■□□□□ 0.84
RAB11FIP3-209ENST00000483002 EAF2Q96CJ1 260 aaPredicted RBP20.29■□□□□ 0.84
RAB11FIP3-209ENST00000483002 GCC1Q96CN9 775 aa20.29■□□□□ 0.84
RAB11FIP3-209ENST00000483002 DHX36Q9H2U1 1008 aaKnown RBP20.29■□□□□ 0.84
RAB11FIP3-209ENST00000483002 PIH1D3Q9NQM4 214 aaKnown RBP20.29■□□□□ 0.84
RAB11FIP3-209ENST00000483002 TLR7Q9NYK1 1049 aaKnown RBP20.29■□□□□ 0.84
RAB11FIP3-209ENST00000483002 HERC5Q9UII4 1024 aaKnown RBP20.29■□□□□ 0.84
RAB11FIP3-209ENST00000483002 COL2A1P02458 1487 aaPredicted RBP20.29■□□□□ 0.84
RAB11FIP3-209ENST00000483002 ANKRD13CQ8N6S4 541 aa20.28■□□□□ 0.84
RAB11FIP3-209ENST00000483002 USP17L5A8MUK1 530 aa20.27■□□□□ 0.84
RAB11FIP3-209ENST00000483002 TNPO2O14787 897 aaKnown RBP20.27■□□□□ 0.84
RAB11FIP3-209ENST00000483002 HMGCS2P54868 508 aa20.27■□□□□ 0.84
RAB11FIP3-209ENST00000483002 CEP85Q6P2H3 762 aa20.27■□□□□ 0.84
RAB11FIP3-209ENST00000483002 PROCA1Q8NCQ7 364 aaPredicted RBP20.27■□□□□ 0.84
RAB11FIP3-209ENST00000483002 PANK1Q8TE04 598 aa20.27■□□□□ 0.84
RAB11FIP3-209ENST00000483002 RNF208Q9H0X6 261 aa20.27■□□□□ 0.84
RAB11FIP3-209ENST00000483002 PNMA3Q9UL41 463 aa20.27■□□□□ 0.84
RAB11FIP3-209ENST00000483002 PALD1Q9ULE6 856 aa20.27■□□□□ 0.84
RAB11FIP3-209ENST00000483002 MGAMO43451 1857 aa20.26■□□□□ 0.83
RAB11FIP3-209ENST00000483002 CCL5P13501 91 aa20.26■□□□□ 0.83
RAB11FIP3-209ENST00000483002 CYP7A1P22680 504 aa20.26■□□□□ 0.83
RAB11FIP3-209ENST00000483002 FLT3LGP49771 235 aa20.26■□□□□ 0.83
RAB11FIP3-209ENST00000483002 DYNLL1P63167 89 aaKnown RBP20.26■□□□□ 0.83
RAB11FIP3-209ENST00000483002 UBXN2AP68543 259 aa20.26■□□□□ 0.83
RAB11FIP3-209ENST00000483002 FOXP4Q8IVH2 680 aaPredicted RBP20.26■□□□□ 0.83
RAB11FIP3-209ENST00000483002 CRACR2BQ8N4Y2 399 aaPredicted RBP20.26■□□□□ 0.83
RAB11FIP3-209ENST00000483002 TRIM34Q9BYJ4 488 aa20.26■□□□□ 0.83
RAB11FIP3-209ENST00000483002 TBC1D2Q9BYX2 928 aa20.26■□□□□ 0.83
RAB11FIP3-209ENST00000483002 EXOC6BQ9Y2D4 811 aa20.26■□□□□ 0.83
RAB11FIP3-209ENST00000483002 MYO5AQ9Y4I1 1855 aaKnown RBP20.26■□□□□ 0.83
RAB11FIP3-209ENST00000483002 ADCY3O60266 1144 aa20.25■□□□□ 0.83
RAB11FIP3-209ENST00000483002 IDH1O75874 414 aaKnown RBP20.25■□□□□ 0.83
RAB11FIP3-209ENST00000483002 SLAIN1Q8ND83 568 aa20.25■□□□□ 0.83
RAB11FIP3-209ENST00000483002 AS3MTQ9HBK9 375 aa20.25■□□□□ 0.83
RAB11FIP3-209ENST00000483002 SAP30BPQ9UHR5 308 aaKnown RBP20.25■□□□□ 0.83
RAB11FIP3-209ENST00000483002 NDUFB9Q9Y6M9 179 aa20.25■□□□□ 0.83
RAB11FIP3-209ENST00000483002 FLT1P17948 1338 aa20.25■□□□□ 0.83
RAB11FIP3-209ENST00000483002 ZBED9Q6R2W3 1325 aa20.25■□□□□ 0.83
RAB11FIP3-209ENST00000483002 CEP290O15078 2479 aa20.25■□□□□ 0.83
RAB11FIP3-209ENST00000483002 DOCK3Q8IZD9 2030 aa20.24■□□□□ 0.83
RAB11FIP3-209ENST00000483002 GJB1P08034 283 aa20.24■□□□□ 0.83
RAB11FIP3-209ENST00000483002 ELNP15502 786 aa20.24■□□□□ 0.83
RAB11FIP3-209ENST00000483002 PABPC4Q13310 644 aaKnown RBP eCLIP20.24■□□□□ 0.83
RAB11FIP3-209ENST00000483002 NKX2-3Q8TAU0 364 aa20.24■□□□□ 0.83
RAB11FIP3-209ENST00000483002 SHISA4Q96DD7 197 aa20.24■□□□□ 0.83
RAB11FIP3-209ENST00000483002 TAOK2Q9UL54 1235 aa20.24■□□□□ 0.83
RAB11FIP3-209ENST00000483002 IGSF3O75054 1194 aa20.23■□□□□ 0.83
RAB11FIP3-209ENST00000483002 ASNSP08243 561 aa20.23■□□□□ 0.83
RAB11FIP3-209ENST00000483002 JAG1P78504 1218 aa20.23■□□□□ 0.83
RAB11FIP3-209ENST00000483002 HABP4Q5JVS0 413 aaKnown RBP20.23■□□□□ 0.83
RAB11FIP3-209ENST00000483002 AACSQ86V21 672 aa20.23■□□□□ 0.83
RAB11FIP3-209ENST00000483002 MIGA1Q8NAN2 632 aa20.23■□□□□ 0.83
RAB11FIP3-209ENST00000483002 COA7Q96BR5 231 aa20.23■□□□□ 0.83
RAB11FIP3-209ENST00000483002 DNAJC18Q9H819 358 aa20.23■□□□□ 0.83
RAB11FIP3-209ENST00000483002 ATAD5Q96QE3 1844 aa20.23■□□□□ 0.83
RAB11FIP3-209ENST00000483002 GDF11O95390 407 aa20.22■□□□□ 0.83
RAB11FIP3-209ENST00000483002 GJA8P48165 433 aa20.22■□□□□ 0.83
RAB11FIP3-209ENST00000483002 GCLCP48506 637 aaPredicted RBP20.22■□□□□ 0.83
RAB11FIP3-209ENST00000483002 FAM110CQ1W6H9 321 aa20.22■□□□□ 0.83
RAB11FIP3-209ENST00000483002 SH3D19Q5HYK7 790 aa20.22■□□□□ 0.83
RAB11FIP3-209ENST00000483002 ERC1Q8IUD2 1116 aa20.22■□□□□ 0.83
RAB11FIP3-209ENST00000483002 MAGEB6Q8N7X4 407 aa20.22■□□□□ 0.83
RAB11FIP3-209ENST00000483002 WDR18Q9BV38 432 aa20.22■□□□□ 0.83
RAB11FIP3-209ENST00000483002 UNC93B1Q9H1C4 597 aa20.22■□□□□ 0.83
RAB11FIP3-209ENST00000483002 ASCC2Q9H1I8 757 aaPredicted RBP20.22■□□□□ 0.83
RAB11FIP3-209ENST00000483002 ANTXR1Q9H6X2 564 aa20.22■□□□□ 0.83
RAB11FIP3-209ENST00000483002 HLA-DOAP06340 250 aa20.21■□□□□ 0.83
RAB11FIP3-209ENST00000483002 BACE1P56817 501 aa20.21■□□□□ 0.83
RAB11FIP3-209ENST00000483002 MTMR2Q13614 643 aa20.21■□□□□ 0.83
RAB11FIP3-209ENST00000483002 SHROOM1Q2M3G4 852 aaPredicted RBP20.21■□□□□ 0.83
RAB11FIP3-209ENST00000483002 METTL16Q86W50 562 aaKnown RBP20.21■□□□□ 0.83
RAB11FIP3-209ENST00000483002 PXYLP1Q8TE99 480 aa20.21■□□□□ 0.83
RAB11FIP3-209ENST00000483002 IL1RAPL2Q9NP60 686 aa20.21■□□□□ 0.83
RAB11FIP3-209ENST00000483002 TMOD4Q9NZQ9 345 aa20.21■□□□□ 0.83
RAB11FIP3-209ENST00000483002 MAST2Q6P0Q8 1798 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms