RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 RNGTTO60942 597 aaKnown RBP4.13□□□□□ -1.75
USH2A-204ENST00000481786 NEFMP07197 916 aa4.13□□□□□ -1.75
USH2A-204ENST00000481786 CCNJLQ8IV13 435 aa4.13□□□□□ -1.75
USH2A-204ENST00000481786 SNX29Q8TEQ0 813 aa4.13□□□□□ -1.75
USH2A-204ENST00000481786 CCDC86Q9H6F5 360 aaKnown RBP4.13□□□□□ -1.75
USH2A-204ENST00000481786 PIDD1Q9HB75 910 aa4.13□□□□□ -1.75
USH2A-204ENST00000481786 ZFYVE28Q9HCC9 887 aa4.13□□□□□ -1.75
USH2A-204ENST00000481786 MRC2Q9UBG0 1479 aa4.12□□□□□ -1.75
USH2A-204ENST00000481786 ATAD2BQ9ULI0 1458 aa4.12□□□□□ -1.75
USH2A-204ENST00000481786 WDR62O43379 1518 aa4.12□□□□□ -1.75
USH2A-204ENST00000481786 HMGXB3Q12766 1538 aa4.12□□□□□ -1.75
USH2A-204ENST00000481786 A0A1W2PP55 124 aa4.12□□□□□ -1.75
USH2A-204ENST00000481786 NDUFB5O43674 189 aa4.12□□□□□ -1.75
USH2A-204ENST00000481786 IGHA2P01877 340 aa4.12□□□□□ -1.75
USH2A-204ENST00000481786 BMP7P18075 431 aa4.12□□□□□ -1.75
USH2A-204ENST00000481786 LINC00310P59036 64 aa4.12□□□□□ -1.75
USH2A-204ENST00000481786 NKPD1Q17RQ9 610 aa4.12□□□□□ -1.75
USH2A-204ENST00000481786 CYFIP1Q7L576 1253 aa4.12□□□□□ -1.75
USH2A-204ENST00000481786 CITED4Q96RK1 184 aa4.12□□□□□ -1.75
USH2A-204ENST00000481786 FAM129BQ96TA1 746 aa4.12□□□□□ -1.75
USH2A-204ENST00000481786 CARS2Q9HA77 564 aaKnown RBP4.12□□□□□ -1.75
USH2A-204ENST00000481786 PCDHGC5Q9Y5F6 944 aa4.12□□□□□ -1.75
USH2A-204ENST00000481786 SNX11Q9Y5W9 270 aa4.12□□□□□ -1.75
USH2A-204ENST00000481786 TCAF2A6NFQ2 919 aa4.11□□□□□ -1.75
USH2A-204ENST00000481786 B3GALT4O96024 378 aa4.11□□□□□ -1.75
USH2A-204ENST00000481786 MED14OSP0DP75 135 aa4.11□□□□□ -1.75
USH2A-204ENST00000481786 ZNF157P51786 506 aaPredicted RBP4.11□□□□□ -1.75
USH2A-204ENST00000481786 NFKB2Q00653 900 aa4.11□□□□□ -1.75
USH2A-204ENST00000481786 PDE3BQ13370 1112 aa4.11□□□□□ -1.75
USH2A-204ENST00000481786 HP1BP3Q5SSJ5 553 aaPredicted RBP4.11□□□□□ -1.75
USH2A-204ENST00000481786 DBX2Q6ZNG2 339 aa4.11□□□□□ -1.75
USH2A-204ENST00000481786 ASB11Q8WXH4 323 aa4.11□□□□□ -1.75
USH2A-204ENST00000481786 TRAIPQ9BWF2 469 aa4.11□□□□□ -1.75
USH2A-204ENST00000481786 DCP1AQ9NPI6 582 aaPredicted RBP4.11□□□□□ -1.75
USH2A-204ENST00000481786 AMOTL2Q9Y2J4 779 aa4.11□□□□□ -1.75
USH2A-204ENST00000481786 ADAMTS20P59510 1910 aa4.11□□□□□ -1.75
USH2A-204ENST00000481786 ID3Q02535 119 aa4.1□□□□□ -1.75
USH2A-204ENST00000481786 KCNA1Q09470 495 aa4.1□□□□□ -1.75
USH2A-204ENST00000481786 USPL1Q5W0Q7 1092 aa4.1□□□□□ -1.75
USH2A-204ENST00000481786 GALNT12Q8IXK2 581 aa4.1□□□□□ -1.75
USH2A-204ENST00000481786 RBCK1Q9BYM8 510 aa4.1□□□□□ -1.75
USH2A-204ENST00000481786 ZCCHC4Q9H5U6 513 aa4.1□□□□□ -1.75
USH2A-204ENST00000481786 ZNF576Q9H609 170 aa4.1□□□□□ -1.75
USH2A-204ENST00000481786 LIN7BQ9HAP6 207 aa4.1□□□□□ -1.75
USH2A-204ENST00000481786 ARAP1Q96P48 1450 aa4.1□□□□□ -1.75
USH2A-204ENST00000481786 GPR182O15218 404 aa4.09□□□□□ -1.75
USH2A-204ENST00000481786 NEFLP07196 543 aa4.09□□□□□ -1.75
USH2A-204ENST00000481786 ORC1Q13415 861 aa4.09□□□□□ -1.75
USH2A-204ENST00000481786 SKOR2Q2VWA4 1001 aaPredicted RBP4.09□□□□□ -1.75
USH2A-204ENST00000481786 KCNN1Q92952 543 aa4.09□□□□□ -1.75
USH2A-204ENST00000481786 ISL2Q96A47 359 aa4.09□□□□□ -1.75
USH2A-204ENST00000481786 EPB41L4BQ9H329 900 aa4.09□□□□□ -1.75
USH2A-204ENST00000481786 ATXN3LQ9H3M9 355 aa4.09□□□□□ -1.75
USH2A-204ENST00000481786 ATP13A1Q9HD20 1204 aa4.09□□□□□ -1.75
USH2A-204ENST00000481786 PCOLCE2Q9UKZ9 415 aa4.09□□□□□ -1.75
USH2A-204ENST00000481786 IVNS1ABPQ9Y6Y0 642 aa4.09□□□□□ -1.75
USH2A-204ENST00000481786 ZCCHC6Q5VYS8 1495 aaKnown RBP4.09□□□□□ -1.75
USH2A-204ENST00000481786 KIF21AQ7Z4S6 1674 aa4.09□□□□□ -1.76
USH2A-204ENST00000481786 ERVFC1P60507 584 aa4.08□□□□□ -1.76
USH2A-204ENST00000481786 KRTAP1-1Q07627 177 aa4.08□□□□□ -1.76
USH2A-204ENST00000481786 UBE3DQ7Z6J8 389 aa4.08□□□□□ -1.76
USH2A-204ENST00000481786 TMC1Q8TDI8 760 aa4.08□□□□□ -1.76
USH2A-204ENST00000481786 FBXO41Q8TF61 875 aa4.08□□□□□ -1.76
USH2A-204ENST00000481786 ALKBH8Q96BT7 664 aaKnown RBP4.08□□□□□ -1.76
USH2A-204ENST00000481786 DMRTB1Q96MA1 342 aa4.08□□□□□ -1.76
USH2A-204ENST00000481786 KCNC2Q96PR1 638 aa4.08□□□□□ -1.76
USH2A-204ENST00000481786 SYNGAP1Q96PV0 1343 aa4.08□□□□□ -1.76
USH2A-204ENST00000481786 CNTNAP4Q9C0A0 1308 aa4.08□□□□□ -1.76
USH2A-204ENST00000481786 NIF3L1Q9GZT8 377 aa4.08□□□□□ -1.76
USH2A-204ENST00000481786 TMPRSS5Q9H3S3 457 aa4.08□□□□□ -1.76
USH2A-204ENST00000481786 ZFYVE1Q9HBF4 777 aa4.08□□□□□ -1.76
USH2A-204ENST00000481786 BIN2Q9UBW5 565 aaPredicted RBP4.08□□□□□ -1.76
USH2A-204ENST00000481786 DCTN4Q9UJW0 460 aa4.08□□□□□ -1.76
USH2A-204ENST00000481786 LMTK3Q96Q04 1460 aa4.07□□□□□ -1.76
USH2A-204ENST00000481786 RSF1Q96T23 1441 aaPredicted RBP4.07□□□□□ -1.76
USH2A-204ENST00000481786 EIF1AYO14602 144 aaKnown RBP4.07□□□□□ -1.76
USH2A-204ENST00000481786 EIF4EBP3O60516 100 aaPredicted RBP4.07□□□□□ -1.76
USH2A-204ENST00000481786 CPNE3O75131 537 aaKnown RBP4.07□□□□□ -1.76
USH2A-204ENST00000481786 SYN1P17600 705 aa4.07□□□□□ -1.76
USH2A-204ENST00000481786 GLDCP23378 1020 aa4.07□□□□□ -1.76
USH2A-204ENST00000481786 GDNFP39905 211 aa4.07□□□□□ -1.76
USH2A-204ENST00000481786 FAAP100Q0VG06 881 aa4.07□□□□□ -1.76
USH2A-204ENST00000481786 KIAA0319Q5VV43 1072 aa4.07□□□□□ -1.76
USH2A-204ENST00000481786 TMC7Q7Z402 723 aa4.07□□□□□ -1.76
USH2A-204ENST00000481786 PRRT2Q7Z6L0 340 aaPredicted RBP4.07□□□□□ -1.76
USH2A-204ENST00000481786 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.07□□□□□ -1.76
USH2A-204ENST00000481786 DNAJC25Q9H1X3 360 aa4.07□□□□□ -1.76
USH2A-204ENST00000481786 SEMA3GQ9NS98 782 aa4.07□□□□□ -1.76
USH2A-204ENST00000481786 CADPSQ9ULU8 1353 aa4.06□□□□□ -1.76
USH2A-204ENST00000481786 PRR33A8MZF0 331 aa4.06□□□□□ -1.76
USH2A-204ENST00000481786 SLFN14P0C7P3 912 aa4.06□□□□□ -1.76
USH2A-204ENST00000481786 DSC3Q14574 896 aa4.06□□□□□ -1.76
USH2A-204ENST00000481786 NFIXQ14938 502 aa4.06□□□□□ -1.76
USH2A-204ENST00000481786 KIF4BQ2VIQ3 1234 aa4.06□□□□□ -1.76
USH2A-204ENST00000481786 CCDC74AQ96AQ1 378 aa4.06□□□□□ -1.76
USH2A-204ENST00000481786 HSPA12BQ96MM6 686 aa4.06□□□□□ -1.76
USH2A-204ENST00000481786 SSU72Q9NP77 194 aaKnown RBP4.06□□□□□ -1.76
USH2A-204ENST00000481786 BAZ1BQ9UIG0 1483 aaKnown RBP4.05□□□□□ -1.76
USH2A-204ENST00000481786 TRIM13O60858 407 aa4.05□□□□□ -1.76
USH2A-204ENST00000481786 MAPK1P28482 360 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms