RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 HIRAP54198 1017 aaPredicted RBP9.77□□□□□ -0.85
SYNE1-225ENST00000481502 NFIAQ12857 509 aa9.77□□□□□ -0.85
SYNE1-225ENST00000481502 ANKRD1Q15327 319 aa9.77□□□□□ -0.85
SYNE1-225ENST00000481502 SUPT20HL1Q3ZLR7 823 aa9.77□□□□□ -0.85
SYNE1-225ENST00000481502 DHX32Q7L7V1 743 aaKnown RBP9.77□□□□□ -0.85
SYNE1-225ENST00000481502 RALYLQ86SE5 291 aaKnown RBP9.77□□□□□ -0.85
SYNE1-225ENST00000481502 RASEFQ8IZ41 740 aa9.77□□□□□ -0.85
SYNE1-225ENST00000481502 ESR2Q92731 530 aa9.77□□□□□ -0.85
SYNE1-225ENST00000481502 DCPSQ96C86 337 aaKnown RBP9.77□□□□□ -0.85
SYNE1-225ENST00000481502 CHMP4CQ96CF2 233 aa9.77□□□□□ -0.85
SYNE1-225ENST00000481502 DEFB129Q9H1M3 183 aa9.77□□□□□ -0.85
SYNE1-225ENST00000481502 DDX4Q9NQI0 724 aaKnown RBP9.77□□□□□ -0.85
SYNE1-225ENST00000481502 TCP11L1Q9NUJ3 509 aa9.77□□□□□ -0.85
SYNE1-225ENST00000481502 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.77□□□□□ -0.85
SYNE1-225ENST00000481502 CYP46A1Q9Y6A2 500 aa9.77□□□□□ -0.85
SYNE1-225ENST00000481502 SRCAPQ6ZRS2 3230 aa9.77□□□□□ -0.85
SYNE1-225ENST00000481502 ECM29Q5VYK3 1845 aa9.77□□□□□ -0.85
SYNE1-225ENST00000481502 GOLGB1Q14789 3259 aaKnown RBP9.76□□□□□ -0.85
SYNE1-225ENST00000481502 MINDY4BA8MYZ0 360 aa9.76□□□□□ -0.85
SYNE1-225ENST00000481502 ST18O60284 1047 aa9.76□□□□□ -0.85
SYNE1-225ENST00000481502 ABCB7O75027 752 aa9.76□□□□□ -0.85
SYNE1-225ENST00000481502 MCM5P33992 734 aa9.76□□□□□ -0.85
SYNE1-225ENST00000481502 PICALMQ13492 652 aa9.76□□□□□ -0.85
SYNE1-225ENST00000481502 RASA3Q14644 834 aa9.76□□□□□ -0.85
SYNE1-225ENST00000481502 DCAF15Q66K64 600 aa9.76□□□□□ -0.85
SYNE1-225ENST00000481502 TATDN1Q6P1N9 297 aa9.76□□□□□ -0.85
SYNE1-225ENST00000481502 BLOC1S2Q6QNY1 142 aa9.76□□□□□ -0.85
SYNE1-225ENST00000481502 RUFY3Q7L099 469 aa9.76□□□□□ -0.85
SYNE1-225ENST00000481502 CDC37L1Q7L3B6 337 aa9.76□□□□□ -0.85
SYNE1-225ENST00000481502 SULF1Q8IWU6 871 aa9.76□□□□□ -0.85
SYNE1-225ENST00000481502 TRPM4Q8TD43 1214 aa9.76□□□□□ -0.85
SYNE1-225ENST00000481502 TMEM87BQ96K49 555 aa9.76□□□□□ -0.85
SYNE1-225ENST00000481502 TTC14Q96N46 770 aa9.76□□□□□ -0.85
SYNE1-225ENST00000481502 KIF2CQ99661 725 aa9.76□□□□□ -0.85
SYNE1-225ENST00000481502 PALD1Q9ULE6 856 aa9.76□□□□□ -0.85
SYNE1-225ENST00000481502 SYNPO2Q9UMS6 1093 aa9.76□□□□□ -0.85
SYNE1-225ENST00000481502 CNTNAP1P78357 1384 aa9.75□□□□□ -0.85
SYNE1-225ENST00000481502 LIFRP42702 1097 aa9.75□□□□□ -0.85
SYNE1-225ENST00000481502 CDK8P49336 464 aa9.75□□□□□ -0.85
SYNE1-225ENST00000481502 PLCD1P51178 756 aa9.75□□□□□ -0.85
SYNE1-225ENST00000481502 RCAN1P53805 252 aa9.75□□□□□ -0.85
SYNE1-225ENST00000481502 EXOSC10Q01780 885 aaKnown RBP9.75□□□□□ -0.85
SYNE1-225ENST00000481502 SART3Q15020 963 aaKnown RBP9.75□□□□□ -0.85
SYNE1-225ENST00000481502 RBM26Q5T8P6 1007 aaKnown RBP9.75□□□□□ -0.85
SYNE1-225ENST00000481502 ANGEL2Q5VTE6 544 aaKnown RBP9.75□□□□□ -0.85
SYNE1-225ENST00000481502 LDHDQ86WU2 507 aa9.75□□□□□ -0.85
SYNE1-225ENST00000481502 IQCA1Q86XH1 822 aa9.75□□□□□ -0.85
SYNE1-225ENST00000481502 ZSCAN29Q8IWY8 852 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-225ENST00000481502 ZNF444Q8N0Y2 327 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-225ENST00000481502 SNX21Q969T3 373 aa9.75□□□□□ -0.85
SYNE1-225ENST00000481502 TEPSINQ96N21 525 aa9.75□□□□□ -0.85
SYNE1-225ENST00000481502 CSRNP1Q96S65 589 aa9.75□□□□□ -0.85
SYNE1-225ENST00000481502 AGXT2Q9BYV1 514 aa9.75□□□□□ -0.85
SYNE1-225ENST00000481502 MKNK2Q9HBH9 465 aa9.75□□□□□ -0.85
SYNE1-225ENST00000481502 VEZTQ9HBM0 779 aa9.75□□□□□ -0.85
SYNE1-225ENST00000481502 PCDHAC2Q9Y5I4 1007 aa9.75□□□□□ -0.85
SYNE1-225ENST00000481502 DDX60LQ5H9U9 1706 aaKnown RBP9.74□□□□□ -0.85
SYNE1-225ENST00000481502 SHTN1A0MZ66 631 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 CLRN2A0PK11 232 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 DDTLA6NHG4 134 aaPredicted RBP9.74□□□□□ -0.85
SYNE1-225ENST00000481502 TCP10L2B9ZVM9 353 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 EGFRP00533 1210 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 RPS6KB1P23443 525 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 NF2P35240 595 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 NOVP48745 357 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 EVCP57679 992 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 PPP2R5BQ15173 497 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 SH3BP5LQ7L8J4 393 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 DGKHQ86XP1 1220 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 MB21D2Q8IYB1 491 aaPredicted RBP9.74□□□□□ -0.85
SYNE1-225ENST00000481502 CRACR2BQ8N4Y2 399 aaPredicted RBP9.74□□□□□ -0.85
SYNE1-225ENST00000481502 NEDD1Q8NHV4 660 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 ANKS1AQ92625 1134 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 JAKMIP1Q96N16 626 aaKnown RBP9.74□□□□□ -0.85
SYNE1-225ENST00000481502 TRIM34Q9BYJ4 488 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 TBC1D2Q9BYX2 928 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 NBPF3Q9H094 633 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 GGA3Q9NZ52 723 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 LAMA4Q16363 1823 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 CDK5RAP2Q96SN8 1893 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 PLIN4Q96Q06 1357 aa9.74□□□□□ -0.85
SYNE1-225ENST00000481502 ERICH2A1L162 156 aa9.73□□□□□ -0.85
SYNE1-225ENST00000481502 PPP1R12BO60237 982 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-225ENST00000481502 CASTP20810 708 aaKnown RBP9.73□□□□□ -0.85
SYNE1-225ENST00000481502 CACNB3P54284 484 aa9.73□□□□□ -0.85
SYNE1-225ENST00000481502 HAND2P61296 217 aa9.73□□□□□ -0.85
SYNE1-225ENST00000481502 FKBP1BP68106 108 aa9.73□□□□□ -0.85
SYNE1-225ENST00000481502 TCP10Q12799 353 aa9.73□□□□□ -0.85
SYNE1-225ENST00000481502 MAP3K11Q16584 847 aa9.73□□□□□ -0.85
SYNE1-225ENST00000481502 ADCK5Q3MIX3 580 aa9.73□□□□□ -0.85
SYNE1-225ENST00000481502 STOX1Q6ZVD7 989 aa9.73□□□□□ -0.85
SYNE1-225ENST00000481502 SGMS1Q86VZ5 419 aa9.73□□□□□ -0.85
SYNE1-225ENST00000481502 TBC1D10CQ8IV04 446 aa9.73□□□□□ -0.85
SYNE1-225ENST00000481502 ZSCAN31Q96LW9 406 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-225ENST00000481502 ZSWIM5Q9P217 1185 aa9.73□□□□□ -0.85
SYNE1-225ENST00000481502 ZNF112Q9UJU3 913 aa9.73□□□□□ -0.85
SYNE1-225ENST00000481502 MYH1P12882 1939 aa9.73□□□□□ -0.85
SYNE1-225ENST00000481502 NAV1Q8NEY1 1877 aa9.72□□□□□ -0.85
SYNE1-225ENST00000481502 TSPY2A6NKD2 308 aa9.72□□□□□ -0.85
SYNE1-225ENST00000481502 CTNND1O60716 968 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms