RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 CAPN2P17655 700 aa19.48■□□□□ 0.71
SH3D21-203ENST00000480549 RCOR1Q9UKL0 485 aa19.48■□□□□ 0.71
SH3D21-203ENST00000480549 JAG2Q9Y219 1238 aa19.48■□□□□ 0.71
SH3D21-203ENST00000480549 GABPB1Q06547 395 aaPredicted RBP19.48■□□□□ 0.71
SH3D21-203ENST00000480549 ATL3Q6DD88 541 aa19.48■□□□□ 0.71
SH3D21-203ENST00000480549 GIMAP6Q6P9H5 292 aa19.48■□□□□ 0.71
SH3D21-203ENST00000480549 C15orf52Q6ZUT6 534 aaKnown RBP19.48■□□□□ 0.71
SH3D21-203ENST00000480549 ZKSCAN3Q9BRR0 538 aa19.48■□□□□ 0.71
SH3D21-203ENST00000480549 LTBP1Q14766 1721 aa19.47■□□□□ 0.71
SH3D21-203ENST00000480549 CCDC144CPQ8IYA2 1237 aa19.47■□□□□ 0.71
SH3D21-203ENST00000480549 TDRD7Q8NHU6 1098 aaKnown RBP19.47■□□□□ 0.71
SH3D21-203ENST00000480549 GOLGA8AA7E2F4 631 aa19.47■□□□□ 0.71
SH3D21-203ENST00000480549 CHRM1P11229 460 aaPredicted RBP19.47■□□□□ 0.71
SH3D21-203ENST00000480549 GPSM2P81274 684 aa19.47■□□□□ 0.71
SH3D21-203ENST00000480549 TOMM22Q9NS69 142 aa19.47■□□□□ 0.71
SH3D21-203ENST00000480549 SLC12A7Q9Y666 1083 aa19.47■□□□□ 0.71
SH3D21-203ENST00000480549 NRXN2Q9P2S2 1712 aa19.47■□□□□ 0.71
SH3D21-203ENST00000480549 CYP2D7A0A087X1C5 515 aa19.46■□□□□ 0.71
SH3D21-203ENST00000480549 RANBP6O60518 1105 aaKnown RBP19.46■□□□□ 0.71
SH3D21-203ENST00000480549 CDKL5O76039 1030 aa19.46■□□□□ 0.71
SH3D21-203ENST00000480549 TMED8Q6PL24 325 aaPredicted RBP19.46■□□□□ 0.71
SH3D21-203ENST00000480549 AATFQ9NY61 560 aaKnown RBP eCLIP19.46■□□□□ 0.71
SH3D21-203ENST00000480549 CCDC69A6NI79 296 aa19.46■□□□□ 0.71
SH3D21-203ENST00000480549 CEBPZQ03701 1054 aaKnown RBP19.46■□□□□ 0.71
SH3D21-203ENST00000480549 SLC20A2Q08357 652 aa19.46■□□□□ 0.71
SH3D21-203ENST00000480549 CTR9Q6PD62 1173 aa19.46■□□□□ 0.71
SH3D21-203ENST00000480549 ANKRD7Q92527 254 aa19.46■□□□□ 0.71
SH3D21-203ENST00000480549 FGRP09769 529 aa19.46■□□□□ 0.71
SH3D21-203ENST00000480549 PHKBQ93100 1093 aa19.46■□□□□ 0.71
SH3D21-203ENST00000480549 ZNF396Q96N95 335 aaPredicted RBP19.46■□□□□ 0.71
SH3D21-203ENST00000480549 AIFM3Q96NN9 605 aa19.46■□□□□ 0.71
SH3D21-203ENST00000480549 GPR101Q96P66 508 aaPredicted RBP19.46■□□□□ 0.71
SH3D21-203ENST00000480549 GOLGA6L4A6NEF3 574 aa19.45■□□□□ 0.7
SH3D21-203ENST00000480549 WTAPQ15007 396 aa19.45■□□□□ 0.7
SH3D21-203ENST00000480549 RBM17Q96I25 401 aaKnown RBP19.45■□□□□ 0.7
SH3D21-203ENST00000480549 KLRG2A4D1S0 409 aaPredicted RBP19.45■□□□□ 0.7
SH3D21-203ENST00000480549 HOXA10P31260 410 aaPredicted RBP19.45■□□□□ 0.7
SH3D21-203ENST00000480549 DACT1Q9NYF0 836 aa19.45■□□□□ 0.7
SH3D21-203ENST00000480549 RBM6P78332 1123 aaKnown RBP19.44■□□□□ 0.7
SH3D21-203ENST00000480549 SART3Q15020 963 aaKnown RBP19.44■□□□□ 0.7
SH3D21-203ENST00000480549 SEC23AQ15436 765 aa19.44■□□□□ 0.7
SH3D21-203ENST00000480549 ZNF827Q17R98 1081 aa19.44■□□□□ 0.7
SH3D21-203ENST00000480549 KIF28PB7ZC32 967 aa19.44■□□□□ 0.7
SH3D21-203ENST00000480549 ESR2Q92731 530 aa19.44■□□□□ 0.7
SH3D21-203ENST00000480549 ALG1Q9BT22 464 aa19.44■□□□□ 0.7
SH3D21-203ENST00000480549 DCP1AQ9NPI6 582 aaPredicted RBP19.44■□□□□ 0.7
SH3D21-203ENST00000480549 KIF23Q02241 960 aaPredicted RBP19.44■□□□□ 0.7
SH3D21-203ENST00000480549 SPTY2D1Q68D10 685 aaPredicted RBP19.44■□□□□ 0.7
SH3D21-203ENST00000480549 CPLX2Q6PUV4 134 aaKnown RBP19.44■□□□□ 0.7
SH3D21-203ENST00000480549 NUP62CLQ9H1M0 184 aa19.44■□□□□ 0.7
SH3D21-203ENST00000480549 STK36Q9NRP7 1315 aa19.43■□□□□ 0.7
SH3D21-203ENST00000480549 NR1I2O75469 434 aa19.43■□□□□ 0.7
SH3D21-203ENST00000480549 EVX2Q03828 476 aa19.43■□□□□ 0.7
SH3D21-203ENST00000480549 ZNF804AQ7Z570 1209 aa19.43■□□□□ 0.7
SH3D21-203ENST00000480549 WDR66Q8TBY9 1149 aa19.43■□□□□ 0.7
SH3D21-203ENST00000480549 CRNKL1Q9BZJ0 848 aaKnown RBP19.43■□□□□ 0.7
SH3D21-203ENST00000480549 USP17L12C9JPN9 530 aa19.43■□□□□ 0.7
SH3D21-203ENST00000480549 USP17L21D6R901 530 aa19.43■□□□□ 0.7
SH3D21-203ENST00000480549 BICD2Q8TD16 824 aa19.43■□□□□ 0.7
SH3D21-203ENST00000480549 DDX19AQ9NUU7 478 aaKnown RBP19.43■□□□□ 0.7
SH3D21-203ENST00000480549 IARSP41252 1262 aaKnown RBP19.42■□□□□ 0.7
SH3D21-203ENST00000480549 BRAPQ7Z569 592 aa19.42■□□□□ 0.7
SH3D21-203ENST00000480549 DZIP1Q86YF9 867 aaKnown RBP19.42■□□□□ 0.7
SH3D21-203ENST00000480549 TMTC2Q8N394 836 aa19.42■□□□□ 0.7
SH3D21-203ENST00000480549 RTEL1Q9NZ71 1219 aa19.42■□□□□ 0.7
SH3D21-203ENST00000480549 TNKSO95271 1327 aa19.42■□□□□ 0.7
SH3D21-203ENST00000480549 ERICH2A1L162 156 aa19.42■□□□□ 0.7
SH3D21-203ENST00000480549 GRIK5Q16478 980 aa19.42■□□□□ 0.7
SH3D21-203ENST00000480549 AKT1S1Q96B36 256 aa19.42■□□□□ 0.7
SH3D21-203ENST00000480549 ATP8A2Q9NTI2 1148 aa19.42■□□□□ 0.7
SH3D21-203ENST00000480549 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.42■□□□□ 0.71e-6■■□□□ 14.3
SH3D21-203ENST00000480549 CDK5RAP2Q96SN8 1893 aa19.42■□□□□ 0.7
SH3D21-203ENST00000480549 UBE2Q2LH0YL09 131 aa19.42■□□□□ 0.7
SH3D21-203ENST00000480549 PLSCR1O15162 318 aa19.42■□□□□ 0.7
SH3D21-203ENST00000480549 BBOX1O75936 387 aa19.42■□□□□ 0.7
SH3D21-203ENST00000480549 PCP11498 1178 aaKnown RBP19.42■□□□□ 0.7
SH3D21-203ENST00000480549 IFNAR1P17181 557 aa19.42■□□□□ 0.7
SH3D21-203ENST00000480549 ATP2B4P23634 1241 aa19.42■□□□□ 0.7
SH3D21-203ENST00000480549 RCAN1P53805 252 aa19.42■□□□□ 0.7
SH3D21-203ENST00000480549 SYNE3Q6ZMZ3 975 aa19.42■□□□□ 0.7
SH3D21-203ENST00000480549 RBM43Q6ZSC3 357 aaKnown RBP19.42■□□□□ 0.7
SH3D21-203ENST00000480549 CRAMP1Q96RY5 1269 aa19.42■□□□□ 0.7
SH3D21-203ENST00000480549 UBAC1Q9BSL1 405 aa19.42■□□□□ 0.7
SH3D21-203ENST00000480549 UFL1O94874 794 aa19.41■□□□□ 0.7
SH3D21-203ENST00000480549 FMNL1O95466 1100 aaPredicted RBP19.41■□□□□ 0.7
SH3D21-203ENST00000480549 POLR3DP05423 398 aaPredicted RBP19.41■□□□□ 0.7
SH3D21-203ENST00000480549 BRD2P25440 801 aaKnown RBP19.41■□□□□ 0.7
SH3D21-203ENST00000480549 CLSTN2Q9H4D0 955 aa19.41■□□□□ 0.7
SH3D21-203ENST00000480549 LDHBP07195 334 aaKnown RBP19.41■□□□□ 0.7
SH3D21-203ENST00000480549 CAMK4Q16566 473 aa19.41■□□□□ 0.7
SH3D21-203ENST00000480549 MYSM1Q5VVJ2 828 aa19.41■□□□□ 0.7
SH3D21-203ENST00000480549 ZNF772Q68DY9 489 aaPredicted RBP19.41■□□□□ 0.7
SH3D21-203ENST00000480549 KRT40Q6A162 431 aa19.41■□□□□ 0.7
SH3D21-203ENST00000480549 ZNF654Q8IZM8 581 aa19.41■□□□□ 0.7
SH3D21-203ENST00000480549 TERF2Q15554 542 aa19.4■□□□□ 0.7
SH3D21-203ENST00000480549 MAP3K11Q16584 847 aa19.4■□□□□ 0.7
SH3D21-203ENST00000480549 RTN1Q16799 776 aa19.4■□□□□ 0.7
SH3D21-203ENST00000480549 GGA1Q9UJY5 639 aa19.4■□□□□ 0.7
SH3D21-203ENST00000480549 MYH6P13533 1939 aa19.4■□□□□ 0.7
SH3D21-203ENST00000480549 HMGB2P26583 209 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms