RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 CTNNA3Q9UI47 895 aa7.64□□□□□ -1.19
HERC4-210ENST00000480158 ZC3H4Q9UPT8 1303 aaKnown RBP7.63□□□□□ -1.19
HERC4-210ENST00000480158 ZKSCAN1P17029 563 aaPredicted RBP7.63□□□□□ -1.19
HERC4-210ENST00000480158 PPARAQ07869 468 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 RASA3Q14644 834 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 CERS3Q8IU89 383 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 TBC1D10CQ8IV04 446 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 MTMR14Q8NCE2 650 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 SLC44A5Q8NCS7 719 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 L3MBTL3Q96JM7 780 aaPredicted RBP7.63□□□□□ -1.19
HERC4-210ENST00000480158 TCEANC2Q96MN5 208 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 TBC1D32Q96NH3 1257 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 UPF3BQ9BZI7 483 aaKnown RBP7.63□□□□□ -1.19
HERC4-210ENST00000480158 NBPF3Q9H094 633 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 OSBPL5Q9H0X9 879 aaPredicted RBP7.63□□□□□ -1.19
HERC4-210ENST00000480158 TAF1DQ9H5J8 278 aaPredicted RBP7.63□□□□□ -1.19
HERC4-210ENST00000480158 MKRN1Q9UHC7 482 aaKnown RBP7.63□□□□□ -1.19
HERC4-210ENST00000480158 SNX14Q9Y5W7 946 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 IQCA1LA6NCM1 817 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 RNF20Q5VTR2 975 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 STOX1Q6ZVD7 989 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 MIGA2Q7L4E1 593 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 SH3BP5LQ7L8J4 393 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 CHST3Q7LGC8 479 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 AMOTL1Q8IY63 956 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 JAKMIP1Q96N16 626 aaKnown RBP7.63□□□□□ -1.19
HERC4-210ENST00000480158 CSRNP1Q96S65 589 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 IDI2Q9BXS1 227 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 DEFB129Q9H1M3 183 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 CREBZFQ9NS37 354 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 FZD1Q9UP38 647 aa7.63□□□□□ -1.19
HERC4-210ENST00000480158 E7EWF7 191 aa7.62□□□□□ -1.19
HERC4-210ENST00000480158 EIF5BO60841 1220 aaKnown RBP7.62□□□□□ -1.19
HERC4-210ENST00000480158 ALX1Q15699 326 aa7.62□□□□□ -1.19
HERC4-210ENST00000480158 C12orf60Q5U649 245 aa7.62□□□□□ -1.19
HERC4-210ENST00000480158 NKX2-3Q8TAU0 364 aa7.62□□□□□ -1.19
HERC4-210ENST00000480158 ZC3H15Q8WU90 426 aaKnown RBP7.62□□□□□ -1.19
HERC4-210ENST00000480158 ARPP21Q9UBL0 812 aaPredicted RBP7.62□□□□□ -1.19
HERC4-210ENST00000480158 TACC3Q9Y6A5 838 aa7.62□□□□□ -1.19
HERC4-210ENST00000480158 CNTNAP1P78357 1384 aa7.62□□□□□ -1.19
HERC4-210ENST00000480158 ADM5C9JUS6 153 aa7.62□□□□□ -1.19
HERC4-210ENST00000480158 VEGFAP15692 232 aaPredicted RBP7.62□□□□□ -1.19
HERC4-210ENST00000480158 CASTP20810 708 aaKnown RBP7.62□□□□□ -1.19
HERC4-210ENST00000480158 RBM25P49756 843 aaKnown RBP7.62□□□□□ -1.19
HERC4-210ENST00000480158 PRKG1Q13976 671 aa7.62□□□□□ -1.19
HERC4-210ENST00000480158 MAP1SQ66K74 1059 aaPredicted RBP7.62□□□□□ -1.19
HERC4-210ENST00000480158 GIMAP6Q6P9H5 292 aa7.62□□□□□ -1.19
HERC4-210ENST00000480158 MFSD6Q6ZSS7 791 aa7.62□□□□□ -1.19
HERC4-210ENST00000480158 NOL8Q76FK4 1167 aaKnown RBP7.62□□□□□ -1.19
HERC4-210ENST00000480158 CRACR2BQ8N4Y2 399 aaPredicted RBP7.62□□□□□ -1.19
HERC4-210ENST00000480158 DCPSQ96C86 337 aaKnown RBP7.62□□□□□ -1.19
HERC4-210ENST00000480158 LARP6Q9BRS8 491 aaKnown RBP7.62□□□□□ -1.19
HERC4-210ENST00000480158 NEDD4P46934 1319 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 B4E1Z4 1266 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 RANBP6O60518 1105 aaKnown RBP7.61□□□□□ -1.19
HERC4-210ENST00000480158 HLA-DOAP06340 250 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 TNNI2P48788 182 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 FAM47AQ5JRC9 791 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 USP50Q70EL3 339 aaPredicted RBP7.61□□□□□ -1.19
HERC4-210ENST00000480158 KRT26Q7Z3Y9 468 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 TTC6Q86TZ1 520 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 FAM151AQ8WW52 585 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 KIF2CQ99661 725 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 ZKSCAN3Q9BRR0 538 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 TRIM34Q9BYJ4 488 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 LRRC2Q9BYS8 371 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 MKNK2Q9HBH9 465 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 BAZ2AQ9UIF9 1905 aaKnown RBP7.61□□□□□ -1.19
HERC4-210ENST00000480158 RPAP1Q9BWH6 1393 aaPredicted RBP7.61□□□□□ -1.19
HERC4-210ENST00000480158 KDM4AO75164 1064 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 ENTPD3O75355 529 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 MMP14P50281 582 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 NEK4P51957 841 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 FMR1Q06787 632 aaKnown RBP eCLIP7.61□□□□□ -1.19
HERC4-210ENST00000480158 TNFAIP1Q13829 316 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 AKNAD1Q5T1N1 836 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 NBPF12Q5TAG4 269 aaPredicted RBP7.61□□□□□ -1.19
HERC4-210ENST00000480158 RALYLQ86SE5 291 aaKnown RBP7.61□□□□□ -1.19
HERC4-210ENST00000480158 USP48Q86UV5 1035 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 SULF1Q8IWU6 871 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 CHMP4CQ96CF2 233 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 GLIS2Q9BZE0 524 aaPredicted RBP7.61□□□□□ -1.19
HERC4-210ENST00000480158 SERPINB13Q9UIV8 391 aa7.61□□□□□ -1.19
HERC4-210ENST00000480158 SLC3A2P08195 630 aaKnown RBP7.6□□□□□ -1.19
HERC4-210ENST00000480158 PYGBP11216 843 aa7.6□□□□□ -1.19
HERC4-210ENST00000480158 TRDNQ13061 729 aa7.6□□□□□ -1.19
HERC4-210ENST00000480158 SHROOM1Q2M3G4 852 aaPredicted RBP7.6□□□□□ -1.19
HERC4-210ENST00000480158 SBK1Q52WX2 424 aa7.6□□□□□ -1.19
HERC4-210ENST00000480158 PNMA8AQ86V59 439 aaPredicted RBP7.6□□□□□ -1.19
HERC4-210ENST00000480158 NEK1Q96PY6 1258 aa7.6□□□□□ -1.19
HERC4-210ENST00000480158 DHX36Q9H2U1 1008 aaKnown RBP7.6□□□□□ -1.19
HERC4-210ENST00000480158 ZNF408Q9H9D4 720 aa7.6□□□□□ -1.19
HERC4-210ENST00000480158 GPBP1L1Q9HC44 474 aaPredicted RBP7.6□□□□□ -1.19
HERC4-210ENST00000480158 PI4KBQ9UBF8 816 aa7.6□□□□□ -1.19
HERC4-210ENST00000480158 TRAF5O00463 557 aa7.6□□□□□ -1.19
HERC4-210ENST00000480158 MPHOSPH10O00566 681 aaKnown RBP7.6□□□□□ -1.19
HERC4-210ENST00000480158 CDK8P49336 464 aa7.6□□□□□ -1.19
HERC4-210ENST00000480158 PDE4BQ07343 736 aa7.6□□□□□ -1.19
HERC4-210ENST00000480158 FAM83AQ86UY5 434 aa7.6□□□□□ -1.19
HERC4-210ENST00000480158 APOBEC3FQ8IUX4 373 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms