RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 U2AF2P26368 475 aaKnown RBP eCLIP15.09■□□□□ 0.01
SEC13-216ENST00000479868 GRAPQ13588 217 aa15.09■□□□□ 0.01
SEC13-216ENST00000479868 TRIM29Q14134 588 aa15.09■□□□□ 0.01
SEC13-216ENST00000479868 AXDND1Q5T1B0 1012 aaPredicted RBP15.09■□□□□ 0.01
SEC13-216ENST00000479868 GRAPLQ8TC17 118 aaPredicted RBP15.09■□□□□ 0.01
SEC13-216ENST00000479868 NUP133Q8WUM0 1156 aa15.09■□□□□ 0.01
SEC13-216ENST00000479868 ERCC4Q92889 916 aaPredicted RBP15.09■□□□□ 0.01
SEC13-216ENST00000479868 ZNF830Q96NB3 372 aaPredicted RBP15.09■□□□□ 0.01
SEC13-216ENST00000479868 ANKIB1Q9P2G1 1089 aa15.09■□□□□ 0.01
SEC13-216ENST00000479868 TRPC5Q9UL62 973 aaPredicted RBP15.09■□□□□ 0.01
SEC13-216ENST00000479868 MAST2Q6P0Q8 1798 aa15.09■□□□□ 0.01
SEC13-216ENST00000479868 A0A087WWV3 80 aa15.09■□□□□ 0.01
SEC13-216ENST00000479868 USP17L12C9JPN9 530 aa15.09■□□□□ 0.01
SEC13-216ENST00000479868 USP17L21D6R901 530 aa15.09■□□□□ 0.01
SEC13-216ENST00000479868 GNL2Q13823 731 aaKnown RBP15.09■□□□□ 0.01
SEC13-216ENST00000479868 ENAHQ8N8S7 591 aaPredicted RBP15.09■□□□□ 0.01
SEC13-216ENST00000479868 FANCBQ8NB91 859 aa15.09■□□□□ 0.01
SEC13-216ENST00000479868 MARCKSP29966 332 aaPredicted RBP15.08■□□□□ 0
SEC13-216ENST00000479868 SLC39A14Q15043 492 aa15.08■□□□□ 0
SEC13-216ENST00000479868 PRR5LQ6MZQ0 368 aa15.08■□□□□ 0
SEC13-216ENST00000479868 C11orf57Q6ZUT1 292 aaPredicted RBP15.08■□□□□ 0
SEC13-216ENST00000479868 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.08■□□□□ 0
SEC13-216ENST00000479868 DCP1AQ9NPI6 582 aaPredicted RBP15.08■□□□□ 0
SEC13-216ENST00000479868 WDHD1O75717 1129 aaPredicted RBP15.07■□□□□ 0
SEC13-216ENST00000479868 FGRP09769 529 aa15.07■□□□□ 0
SEC13-216ENST00000479868 RCAN1P53805 252 aa15.07■□□□□ 0
SEC13-216ENST00000479868 CRACR2BQ8N4Y2 399 aaPredicted RBP15.07■□□□□ 0
SEC13-216ENST00000479868 TDRD7Q8NHU6 1098 aaKnown RBP15.07■□□□□ 0
SEC13-216ENST00000479868 ZSCAN10Q96SZ4 725 aaPredicted RBP15.07■□□□□ 0
SEC13-216ENST00000479868 MROH7-TTC4A0A0A0MT08 1334 aa15.07■□□□□ 0
SEC13-216ENST00000479868 MYH6P13533 1939 aa15.07■□□□□ 0
SEC13-216ENST00000479868 LAMB1P07942 1786 aa15.07■□□□□ 0
SEC13-216ENST00000479868 ADRA2BP18089 450 aa15.07■□□□□ 0
SEC13-216ENST00000479868 TRIM22Q8IYM9 498 aa15.07■□□□□ 0
SEC13-216ENST00000479868 WASF1Q92558 559 aa15.07■□□□□ 0
SEC13-216ENST00000479868 MAP3K14Q99558 947 aa15.07■□□□□ 0
SEC13-216ENST00000479868 TTC12Q9H892 705 aaPredicted RBP15.07■□□□□ 0
SEC13-216ENST00000479868 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.07■□□□□ 0
SEC13-216ENST00000479868 KCNJ14Q9UNX9 436 aa15.07■□□□□ 0
SEC13-216ENST00000479868 CCDC196A0A1B0GTZ2 297 aa15.06■□□□□ 0
SEC13-216ENST00000479868 GYS1P13807 737 aa15.06■□□□□ 0
SEC13-216ENST00000479868 PTPAQ15257 358 aa15.06■□□□□ 0
SEC13-216ENST00000479868 STX1AQ16623 288 aa15.06■□□□□ 0
SEC13-216ENST00000479868 GPR101Q96P66 508 aaPredicted RBP15.06■□□□□ 0
SEC13-216ENST00000479868 CRNKL1Q9BZJ0 848 aaKnown RBP15.06■□□□□ 0
SEC13-216ENST00000479868 BTBD18B2RXH4 712 aa15.06■□□□□ 0
SEC13-216ENST00000479868 MMP1P03956 469 aa15.06■□□□□ 0
SEC13-216ENST00000479868 IQCB1Q15051 598 aa15.06■□□□□ 0
SEC13-216ENST00000479868 NAP1L5Q96NT1 182 aaPredicted RBP15.06■□□□□ 0
SEC13-216ENST00000479868 SDF4Q9BRK5 362 aa15.06■□□□□ 0
SEC13-216ENST00000479868 DLEC1Q9Y238 1755 aa15.05■□□□□ 0
SEC13-216ENST00000479868 KIAA1551Q9HCM1 1747 aa15.05■□□□□ 0
SEC13-216ENST00000479868 XDHP47989 1333 aa15.05■□□□□ 0
SEC13-216ENST00000479868 DEXIO95424 95 aa15.05■□□□□ 0
SEC13-216ENST00000479868 CAVIN2O95810 425 aa15.05■□□□□ 0
SEC13-216ENST00000479868 CYP2D6P10635 497 aa15.05■□□□□ 0
SEC13-216ENST00000479868 SPC24Q8NBT2 197 aa15.05■□□□□ 0
SEC13-216ENST00000479868 CERKQ8TCT0 537 aa15.05■□□□□ 0
SEC13-216ENST00000479868 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.05■□□□□ 0
SEC13-216ENST00000479868 LEMD3Q9Y2U8 911 aa15.05■□□□□ 0
SEC13-216ENST00000479868 OFD1O75665 1012 aa15.05■□□□□ -0
SEC13-216ENST00000479868 PFKFB1P16118 471 aa15.05■□□□□ -0
SEC13-216ENST00000479868 CMA1P23946 247 aa15.05■□□□□ -0
SEC13-216ENST00000479868 IFIT1BQ5T764 474 aaKnown RBP15.05■□□□□ -0
SEC13-216ENST00000479868 DZIP1Q86YF9 867 aaKnown RBP15.05■□□□□ -0
SEC13-216ENST00000479868 NOSTRINQ8IVI9 506 aa15.05■□□□□ -0
SEC13-216ENST00000479868 DIS3L2Q8IYB7 885 aaKnown RBP15.05■□□□□ -0
SEC13-216ENST00000479868 PKNOX2Q96KN3 472 aa15.05■□□□□ -0
SEC13-216ENST00000479868 ATP8A2Q9NTI2 1148 aa15.05■□□□□ -0
SEC13-216ENST00000479868 ZNF202O95125 648 aa15.04■□□□□ -0
SEC13-216ENST00000479868 PCP11498 1178 aaKnown RBP15.04■□□□□ -0
SEC13-216ENST00000479868 IQCA1Q86XH1 822 aa15.04■□□□□ -0
SEC13-216ENST00000479868 QTRT2Q9H974 415 aaKnown RBP15.04■□□□□ -0
SEC13-216ENST00000479868 ZBTB22O15209 634 aa15.04■□□□□ -0
SEC13-216ENST00000479868 NMT2O60551 498 aa15.04■□□□□ -0
SEC13-216ENST00000479868 PPP6R2O75170 966 aa15.04■□□□□ -0
SEC13-216ENST00000479868 GRIK5Q16478 980 aa15.04■□□□□ -0
SEC13-216ENST00000479868 SPTY2D1Q68D10 685 aaPredicted RBP15.04■□□□□ -0
SEC13-216ENST00000479868 RPGRQ92834 1020 aaKnown RBP15.04■□□□□ -0
SEC13-216ENST00000479868 ORC4O43929 436 aa15.03■□□□□ -0
SEC13-216ENST00000479868 SERPINB2P05120 415 aa15.03■□□□□ -0
SEC13-216ENST00000479868 GPSM2P81274 684 aa15.03■□□□□ -0
SEC13-216ENST00000479868 TROAPQ12815 778 aa15.03■□□□□ -0
SEC13-216ENST00000479868 SLC4A8Q2Y0W8 1093 aa15.03■□□□□ -0
SEC13-216ENST00000479868 CRY2Q49AN0 593 aa15.03■□□□□ -0
SEC13-216ENST00000479868 SHC4Q6S5L8 630 aa15.03■□□□□ -0
SEC13-216ENST00000479868 SHISA4Q96DD7 197 aa15.03■□□□□ -0
SEC13-216ENST00000479868 ANO10Q9NW15 660 aa15.03■□□□□ -0
SEC13-216ENST00000479868 ARPP21Q9UBL0 812 aaPredicted RBP15.03■□□□□ -0
SEC13-216ENST00000479868 BRWD3Q6RI45 1802 aa15.03■□□□□ -0
SEC13-216ENST00000479868 PLEKHA8P1O95397 391 aa15.03■□□□□ -0
SEC13-216ENST00000479868 LDHBP07195 334 aaKnown RBP15.03■□□□□ -0
SEC13-216ENST00000479868 TOB1P50616 345 aaPredicted RBP15.03■□□□□ -0
SEC13-216ENST00000479868 KIAA2012Q0VF49 1180 aa15.03■□□□□ -0
SEC13-216ENST00000479868 FUT2Q10981 343 aa15.03■□□□□ -0
SEC13-216ENST00000479868 NR5A1Q13285 461 aa15.03■□□□□ -0
SEC13-216ENST00000479868 PPP2R5BQ15173 497 aa15.03■□□□□ -0
SEC13-216ENST00000479868 SAFBQ15424 915 aaKnown RBP eCLIP15.03■□□□□ -06e-6■□□□□ 10.6
SEC13-216ENST00000479868 FAM47AQ5JRC9 791 aa15.03■□□□□ -0
SEC13-216ENST00000479868 CATIPQ7Z7H3 387 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms