RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 DDX4Q9NQI0 724 aaKnown RBP14.08□□□□□ -0.16
TM9SF4-206ENST00000479591 INCENPQ9NQS7 918 aa14.08□□□□□ -0.16
TM9SF4-206ENST00000479591 SAP30BPQ9UHR5 308 aaKnown RBP14.08□□□□□ -0.16
TM9SF4-206ENST00000479591 ANGEL1Q9UNK9 670 aaKnown RBP14.08□□□□□ -0.16
TM9SF4-206ENST00000479591 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.08□□□□□ -0.16
TM9SF4-206ENST00000479591 COL2A1P02458 1487 aaPredicted RBP14.07□□□□□ -0.16
TM9SF4-206ENST00000479591 ERICH2A1L162 156 aa14.07□□□□□ -0.16
TM9SF4-206ENST00000479591 ENTPD3O75355 529 aa14.07□□□□□ -0.16
TM9SF4-206ENST00000479591 HLA-DOAP06340 250 aa14.07□□□□□ -0.16
TM9SF4-206ENST00000479591 YBX3P16989 372 aaKnown RBP eCLIP14.07□□□□□ -0.16
TM9SF4-206ENST00000479591 PLCD1P51178 756 aa14.07□□□□□ -0.16
TM9SF4-206ENST00000479591 ZNF280AP59817 542 aaPredicted RBP14.07□□□□□ -0.16
TM9SF4-206ENST00000479591 C16orf86Q6ZW13 317 aa14.07□□□□□ -0.16
TM9SF4-206ENST00000479591 IQCA1Q86XH1 822 aa14.07□□□□□ -0.16
TM9SF4-206ENST00000479591 STK11IPQ8N1F8 1099 aa14.07□□□□□ -0.16
TM9SF4-206ENST00000479591 TMTC2Q8N394 836 aa14.07□□□□□ -0.16
TM9SF4-206ENST00000479591 PRMT6Q96LA8 375 aaPredicted RBP14.07□□□□□ -0.16
TM9SF4-206ENST00000479591 LARP6Q9BRS8 491 aaKnown RBP14.07□□□□□ -0.16
TM9SF4-206ENST00000479591 SLKQ9H2G2 1235 aaPredicted RBP14.07□□□□□ -0.16
TM9SF4-206ENST00000479591 TDRD3Q9H7E2 651 aaKnown RBP14.07□□□□□ -0.16
TM9SF4-206ENST00000479591 MKNK2Q9HBH9 465 aa14.07□□□□□ -0.16
TM9SF4-206ENST00000479591 CIZ1Q9ULV3 898 aaPredicted RBP14.07□□□□□ -0.16
TM9SF4-206ENST00000479591 PCDHAC2Q9Y5I4 1007 aa14.07□□□□□ -0.16
TM9SF4-206ENST00000479591 SMIM22K7EJ46 135 aa14.06□□□□□ -0.16
TM9SF4-206ENST00000479591 IFIT3O14879 490 aaKnown RBP14.06□□□□□ -0.16
TM9SF4-206ENST00000479591 MYO1BO43795 1136 aa14.06□□□□□ -0.16
TM9SF4-206ENST00000479591 RANBP6O60518 1105 aaKnown RBP14.06□□□□□ -0.16
TM9SF4-206ENST00000479591 LARGE1O95461 756 aa14.06□□□□□ -0.16
TM9SF4-206ENST00000479591 APOBRQ0VD83 1088 aa14.06□□□□□ -0.16
TM9SF4-206ENST00000479591 NFIAQ12857 509 aa14.06□□□□□ -0.16
TM9SF4-206ENST00000479591 TMEM67Q5HYA8 995 aa14.06□□□□□ -0.16
TM9SF4-206ENST00000479591 FKBP1CQ5VVH2 108 aa14.06□□□□□ -0.16
TM9SF4-206ENST00000479591 SGMS1Q86VZ5 419 aa14.06□□□□□ -0.16
TM9SF4-206ENST00000479591 IGDCC4Q8TDY8 1250 aa14.06□□□□□ -0.16
TM9SF4-206ENST00000479591 ZBED3Q96IU2 234 aaPredicted RBP14.06□□□□□ -0.16
TM9SF4-206ENST00000479591 UBAC1Q9BSL1 405 aa14.06□□□□□ -0.16
TM9SF4-206ENST00000479591 EHD4Q9H223 541 aa14.06□□□□□ -0.16
TM9SF4-206ENST00000479591 MYOZ2Q9NPC6 264 aa14.06□□□□□ -0.16
TM9SF4-206ENST00000479591 SWAP70Q9UH65 585 aa14.06□□□□□ -0.16
TM9SF4-206ENST00000479591 PFKFB2O60825 505 aa14.05□□□□□ -0.16
TM9SF4-206ENST00000479591 PRDM1O75626 825 aa14.05□□□□□ -0.16
TM9SF4-206ENST00000479591 DDIT3P35638 169 aa14.05□□□□□ -0.16
TM9SF4-206ENST00000479591 GMPSP49915 693 aaPredicted RBP14.05□□□□□ -0.16
TM9SF4-206ENST00000479591 EVX2Q03828 476 aa14.05□□□□□ -0.16
TM9SF4-206ENST00000479591 WTAPQ15007 396 aa14.05□□□□□ -0.16
TM9SF4-206ENST00000479591 SPDYE2Q495Y8 402 aa14.05□□□□□ -0.16
TM9SF4-206ENST00000479591 CCDC178Q5BJE1 867 aa14.05□□□□□ -0.16
TM9SF4-206ENST00000479591 CCDC83Q8IWF9 413 aa14.05□□□□□ -0.16
TM9SF4-206ENST00000479591 ZNF444Q8N0Y2 327 aaPredicted RBP14.05□□□□□ -0.16
TM9SF4-206ENST00000479591 GPC2Q8N158 579 aa14.05□□□□□ -0.16
TM9SF4-206ENST00000479591 GTF3C6Q969F1 213 aa14.05□□□□□ -0.16
TM9SF4-206ENST00000479591 LY9Q9HBG7 655 aa14.05□□□□□ -0.16
TM9SF4-206ENST00000479591 FOXD4L1Q9NU39 408 aa14.05□□□□□ -0.16
TM9SF4-206ENST00000479591 CHMP5Q9NZZ3 219 aa14.05□□□□□ -0.16
TM9SF4-206ENST00000479591 FAM198AQ9UFP1 575 aa14.05□□□□□ -0.16
TM9SF4-206ENST00000479591 GJA3Q9Y6H8 435 aa14.05□□□□□ -0.16
TM9SF4-206ENST00000479591 ZNF541Q9H0D2 1346 aa14.05□□□□□ -0.16
TM9SF4-206ENST00000479591 ATRNL1Q5VV63 1379 aa14.05□□□□□ -0.16
TM9SF4-206ENST00000479591 KLF18A0A0U1RQI7 1052 aa14.04□□□□□ -0.16
TM9SF4-206ENST00000479591 TSPY2A6NKD2 308 aa14.04□□□□□ -0.16
TM9SF4-206ENST00000479591 PDIA3P30101 505 aaKnown RBP14.04□□□□□ -0.16
TM9SF4-206ENST00000479591 CDK8P49336 464 aa14.04□□□□□ -0.16
TM9SF4-206ENST00000479591 GABPAQ06546 454 aa14.04□□□□□ -0.16
TM9SF4-206ENST00000479591 SLC4A8Q2Y0W8 1093 aa14.04□□□□□ -0.16
TM9SF4-206ENST00000479591 NKX2-3Q8TAU0 364 aa14.04□□□□□ -0.16
TM9SF4-206ENST00000479591 DYNLL2Q96FJ2 89 aa14.04□□□□□ -0.16
TM9SF4-206ENST00000479591 ZSCAN10Q96SZ4 725 aaPredicted RBP14.04□□□□□ -0.16
TM9SF4-206ENST00000479591 ZNF70Q9UC06 446 aaPredicted RBP14.04□□□□□ -0.16
TM9SF4-206ENST00000479591 SERPINB13Q9UIV8 391 aa14.04□□□□□ -0.16
TM9SF4-206ENST00000479591 MYH8P13535 1937 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 CCDC69A6NI79 296 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 WNT10BO00744 389 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 GRIN3BO60391 1043 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 RASA1P20936 1047 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 RCAN1P53805 252 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 CACNB3P54284 484 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 TCP10Q12799 353 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 STK3Q13188 491 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 SEC23AQ15436 765 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 GPR162Q16538 588 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 SYNE3Q6ZMZ3 975 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 NFXL1Q6ZNB6 911 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 FAM83AQ86UY5 434 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 MICALL2Q8IY33 904 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 NECAB1Q8N987 351 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 LLPHQ9BRT6 129 aaKnown RBP14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 GPHNQ9NQX3 736 aaPredicted RBP14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 TCP11L1Q9NUJ3 509 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 RNF181Q9P0P0 153 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 PI4KBQ9UBF8 816 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 CNOT7Q9UIV1 285 aaKnown RBP14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 SMC3Q9UQE7 1217 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 TNKSO95271 1327 aa14.03□□□□□ -0.16
TM9SF4-206ENST00000479591 ZC3H4Q9UPT8 1303 aaKnown RBP14.02□□□□□ -0.17
TM9SF4-206ENST00000479591 GOLGA8BA8MQT2 603 aa14.02□□□□□ -0.17
TM9SF4-206ENST00000479591 H7C1D1 291 aa14.02□□□□□ -0.17
TM9SF4-206ENST00000479591 DHX16O60231 1041 aaKnown RBP14.02□□□□□ -0.17
TM9SF4-206ENST00000479591 TSPY3P0CV98 308 aa14.02□□□□□ -0.17
TM9SF4-206ENST00000479591 TSPY8P0CW00 308 aa14.02□□□□□ -0.17
TM9SF4-206ENST00000479591 TFAP4Q01664 338 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms