RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 C12orf50Q8NA57 414 aaPredicted RBP8.11□□□□□ -1.11
CCDC171-207ENST00000478913 SMG8Q8ND04 991 aaKnown RBP8.11□□□□□ -1.11
CCDC171-207ENST00000478913 GAL3ST3Q96A11 431 aa8.11□□□□□ -1.11
CCDC171-207ENST00000478913 RHOVQ96L33 236 aa8.11□□□□□ -1.11
CCDC171-207ENST00000478913 PCDHB5Q9Y5E4 795 aa8.11□□□□□ -1.11
CCDC171-207ENST00000478913 ABCC2Q92887 1545 aa8.11□□□□□ -1.11
CCDC171-207ENST00000478913 PREX1Q8TCU6 1659 aa8.11□□□□□ -1.11
CCDC171-207ENST00000478913 SART1O43290 800 aaKnown RBP8.1□□□□□ -1.11
CCDC171-207ENST00000478913 PF4P02776 101 aa8.1□□□□□ -1.11
CCDC171-207ENST00000478913 SLFN14P0C7P3 912 aa8.1□□□□□ -1.11
CCDC171-207ENST00000478913 LMNB2Q03252 620 aa8.1□□□□□ -1.11
CCDC171-207ENST00000478913 CAMK2GQ13555 558 aaPredicted RBP8.1□□□□□ -1.11
CCDC171-207ENST00000478913 KIF4BQ2VIQ3 1234 aa8.1□□□□□ -1.11
CCDC171-207ENST00000478913 SNAP47Q5SQN1 464 aa8.1□□□□□ -1.11
CCDC171-207ENST00000478913 Q6ZS46 218 aa8.1□□□□□ -1.11
CCDC171-207ENST00000478913 TRIM42Q8IWZ5 723 aa8.1□□□□□ -1.11
CCDC171-207ENST00000478913 WDR89Q96FK6 387 aaPredicted RBP8.1□□□□□ -1.11
CCDC171-207ENST00000478913 CACNA2D2Q9NY47 1150 aa8.1□□□□□ -1.11
CCDC171-207ENST00000478913 PCDHA4Q9UN74 947 aa8.1□□□□□ -1.11
CCDC171-207ENST00000478913 AP4E1Q9UPM8 1137 aa8.1□□□□□ -1.11
CCDC171-207ENST00000478913 PCDHGB7Q9Y5F8 929 aa8.1□□□□□ -1.11
CCDC171-207ENST00000478913 NCOA1Q15788 1441 aa8.1□□□□□ -1.11
CCDC171-207ENST00000478913 ADH5P11766 374 aa8.09□□□□□ -1.11
CCDC171-207ENST00000478913 GATA4P43694 442 aa8.09□□□□□ -1.11
CCDC171-207ENST00000478913 FAM160A1Q05DH4 1040 aa8.09□□□□□ -1.11
CCDC171-207ENST00000478913 JARID2Q92833 1246 aaPredicted RBP8.09□□□□□ -1.11
CCDC171-207ENST00000478913 MEGF10Q96KG7 1140 aa8.09□□□□□ -1.11
CCDC171-207ENST00000478913 PTPRKQ15262 1439 aa8.09□□□□□ -1.11
CCDC171-207ENST00000478913 SYNGAP1Q96PV0 1343 aa8.08□□□□□ -1.12
CCDC171-207ENST00000478913 WDR97A6NE52 1622 aa8.08□□□□□ -1.12
CCDC171-207ENST00000478913 GAS2O43903 313 aaKnown RBP8.08□□□□□ -1.12
CCDC171-207ENST00000478913 TIAF1O95411 115 aa8.08□□□□□ -1.12
CCDC171-207ENST00000478913 ERCC5P28715 1186 aaPredicted RBP8.08□□□□□ -1.12
CCDC171-207ENST00000478913 EIF4A3P38919 411 aaKnown RBP8.08□□□□□ -1.12
CCDC171-207ENST00000478913 PREPP48147 710 aa8.08□□□□□ -1.12
CCDC171-207ENST00000478913 SOX4Q06945 474 aaPredicted RBP8.08□□□□□ -1.12
CCDC171-207ENST00000478913 IGSF5Q9NSI5 407 aa8.08□□□□□ -1.12
CCDC171-207ENST00000478913 PTPRGP23470 1445 aa8.08□□□□□ -1.12
CCDC171-207ENST00000478913 POGZQ7Z3K3 1410 aa8.08□□□□□ -1.12
CCDC171-207ENST00000478913 TMPRSS2O15393 492 aa8.07□□□□□ -1.12
CCDC171-207ENST00000478913 DRD2P14416 443 aa8.07□□□□□ -1.12
CCDC171-207ENST00000478913 ID3Q02535 119 aa8.07□□□□□ -1.12
CCDC171-207ENST00000478913 PTPN11Q06124 597 aaPredicted RBP8.07□□□□□ -1.12
CCDC171-207ENST00000478913 ZNF772Q68DY9 489 aaPredicted RBP8.07□□□□□ -1.12
CCDC171-207ENST00000478913 CCDC84Q86UT8 332 aaPredicted RBP8.07□□□□□ -1.12
CCDC171-207ENST00000478913 ZNF654Q8IZM8 581 aa8.07□□□□□ -1.12
CCDC171-207ENST00000478913 GOLM1Q8NBJ4 401 aa8.07□□□□□ -1.12
CCDC171-207ENST00000478913 UBL7Q96S82 380 aaPredicted RBP8.07□□□□□ -1.12
CCDC171-207ENST00000478913 DDX41Q9UJV9 622 aaKnown RBP8.07□□□□□ -1.12
CCDC171-207ENST00000478913 SUPT16HQ9Y5B9 1047 aaKnown RBP8.07□□□□□ -1.12
CCDC171-207ENST00000478913 UVSSAQ2YD98 709 aa8.06□□□□□ -1.12
CCDC171-207ENST00000478913 BNC2Q6ZN30 1099 aaPredicted RBP8.06□□□□□ -1.12
CCDC171-207ENST00000478913 DYMQ7RTS9 669 aa8.06□□□□□ -1.12
CCDC171-207ENST00000478913 KIAA0825Q8IV33 1275 aa8.06□□□□□ -1.12
CCDC171-207ENST00000478913 DZIP1LQ8IYY4 767 aaKnown RBP8.06□□□□□ -1.12
CCDC171-207ENST00000478913 ELMO3Q96BJ8 720 aa8.06□□□□□ -1.12
CCDC171-207ENST00000478913 SPON2Q9BUD6 331 aa8.06□□□□□ -1.12
CCDC171-207ENST00000478913 TGIF2Q9GZN2 237 aa8.06□□□□□ -1.12
CCDC171-207ENST00000478913 ADAMTS1Q9UHI8 967 aa8.06□□□□□ -1.12
CCDC171-207ENST00000478913 PPP1R9AQ9ULJ8 1098 aa8.06□□□□□ -1.12
CCDC171-207ENST00000478913 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.06□□□□□ -1.12
CCDC171-207ENST00000478913 PCDHGC5Q9Y5F6 944 aa8.06□□□□□ -1.12
CCDC171-207ENST00000478913 KIAA0556O60303 1618 aa8.06□□□□□ -1.12
CCDC171-207ENST00000478913 MAGI3Q5TCQ9 1506 aa8.05□□□□□ -1.12
CCDC171-207ENST00000478913 BPNT1O95861 308 aa8.05□□□□□ -1.12
CCDC171-207ENST00000478913 F13A1P00488 732 aa8.05□□□□□ -1.12
CCDC171-207ENST00000478913 RACK1P63244 317 aaKnown RBP8.05□□□□□ -1.12
CCDC171-207ENST00000478913 ZC3H12AQ5D1E8 599 aaKnown RBP8.05□□□□□ -1.12
CCDC171-207ENST00000478913 WIPI1Q5MNZ9 446 aaPredicted RBP8.05□□□□□ -1.12
CCDC171-207ENST00000478913 FBXL19Q6PCT2 694 aa8.05□□□□□ -1.12
CCDC171-207ENST00000478913 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.05□□□□□ -1.12
CCDC171-207ENST00000478913 C2CD4AQ8NCU7 369 aaPredicted RBP8.05□□□□□ -1.12
CCDC171-207ENST00000478913 ZNF296Q8WUU4 475 aaPredicted RBP8.05□□□□□ -1.12
CCDC171-207ENST00000478913 GATAD2BQ8WXI9 593 aa8.05□□□□□ -1.12
CCDC171-207ENST00000478913 UTP4Q969X6 686 aaKnown RBP8.05□□□□□ -1.12
CCDC171-207ENST00000478913 FAM46AQ96IP4 442 aaKnown RBP8.05□□□□□ -1.12
CCDC171-207ENST00000478913 ATXN3LQ9H3M9 355 aa8.05□□□□□ -1.12
CCDC171-207ENST00000478913 CCSER2Q9H7U1 834 aa8.05□□□□□ -1.12
CCDC171-207ENST00000478913 CRIM1Q9NZV1 1036 aa8.05□□□□□ -1.12
CCDC171-207ENST00000478913 FGD5Q6ZNL6 1462 aa8.05□□□□□ -1.12
CCDC171-207ENST00000478913 DCDC2CA8MYV0 355 aa8.04□□□□□ -1.12
CCDC171-207ENST00000478913 GARTP22102 1010 aa8.04□□□□□ -1.12
CCDC171-207ENST00000478913 RAD51AP2Q09MP3 1159 aa8.04□□□□□ -1.12
CCDC171-207ENST00000478913 LRFN4Q6PJG9 635 aa8.04□□□□□ -1.12
CCDC171-207ENST00000478913 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.04□□□□□ -1.12
CCDC171-207ENST00000478913 HDXQ7Z353 690 aa8.04□□□□□ -1.12
CCDC171-207ENST00000478913 PLPPR2Q96GM1 343 aa8.04□□□□□ -1.12
CCDC171-207ENST00000478913 SSBP4Q9BWG4 385 aaPredicted RBP8.04□□□□□ -1.12
CCDC171-207ENST00000478913 PIDD1Q9HB75 910 aa8.04□□□□□ -1.12
CCDC171-207ENST00000478913 KCNQ5Q9NR82 932 aa8.04□□□□□ -1.12
CCDC171-207ENST00000478913 PICK1Q9NRD5 415 aa8.04□□□□□ -1.12
CCDC171-207ENST00000478913 CSADQ9Y600 493 aa8.04□□□□□ -1.12
CCDC171-207ENST00000478913 ACTL7BQ9Y614 415 aa8.04□□□□□ -1.12
CCDC171-207ENST00000478913 ASPAP45381 313 aa8.03□□□□□ -1.12
CCDC171-207ENST00000478913 USP11P51784 963 aa8.03□□□□□ -1.12
CCDC171-207ENST00000478913 ERVK-24P63145 666 aa8.03□□□□□ -1.12
CCDC171-207ENST00000478913 RPL6Q02878 288 aaKnown RBP8.03□□□□□ -1.12
CCDC171-207ENST00000478913 INPP5AQ14642 412 aa8.03□□□□□ -1.12
CCDC171-207ENST00000478913 ZMYM1Q5SVZ6 1142 aa8.03□□□□□ -1.12
CCDC171-207ENST00000478913 MEX3CQ5U5Q3 659 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms