RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 HMG20BQ9P0W2 317 aa15.83■□□□□ 0.12
TDP2-204ENST00000478507 AKAP2Q9Y2D5 859 aa15.83■□□□□ 0.12
TDP2-204ENST00000478507 SRGAP3O43295 1099 aa15.82■□□□□ 0.12
TDP2-204ENST00000478507 MAP4K4O95819 1239 aaPredicted RBP15.82■□□□□ 0.12
TDP2-204ENST00000478507 CAPN2P17655 700 aa15.82■□□□□ 0.12
TDP2-204ENST00000478507 RARSP54136 660 aaKnown RBP15.82■□□□□ 0.12
TDP2-204ENST00000478507 RRP1BQ14684 758 aaKnown RBP15.82■□□□□ 0.12
TDP2-204ENST00000478507 ERICH6Q7L0X2 663 aa15.82■□□□□ 0.12
TDP2-204ENST00000478507 ARHGAP45Q92619 1136 aa15.82■□□□□ 0.12
TDP2-204ENST00000478507 OSBPL5Q9H0X9 879 aaPredicted RBP15.82■□□□□ 0.12
TDP2-204ENST00000478507 PLXNB2O15031 1838 aa15.82■□□□□ 0.12
TDP2-204ENST00000478507 ARID4AP29374 1257 aaPredicted RBP15.81■□□□□ 0.12
TDP2-204ENST00000478507 SPATA5Q8NB90 893 aa15.81■□□□□ 0.12
TDP2-204ENST00000478507 DEFB118Q96PH6 123 aa15.81■□□□□ 0.12
TDP2-204ENST00000478507 NR2E3Q9Y5X4 410 aa15.81■□□□□ 0.12
TDP2-204ENST00000478507 CDK5RAP2Q96SN8 1893 aa15.8■□□□□ 0.12
TDP2-204ENST00000478507 GNAI3P08754 354 aa15.8■□□□□ 0.12
TDP2-204ENST00000478507 SPP2Q13103 211 aa15.8■□□□□ 0.12
TDP2-204ENST00000478507 SH3D19Q5HYK7 790 aa15.8■□□□□ 0.12
TDP2-204ENST00000478507 TBC1D9Q6ZT07 1266 aa15.8■□□□□ 0.12
TDP2-204ENST00000478507 ZNF280CQ8ND82 737 aa15.8■□□□□ 0.12
TDP2-204ENST00000478507 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.8■□□□□ 0.12
TDP2-204ENST00000478507 GJD2Q9UKL4 321 aa15.8■□□□□ 0.12
TDP2-204ENST00000478507 PNMA3Q9UL41 463 aa15.8■□□□□ 0.12
TDP2-204ENST00000478507 FOCADQ5VW36 1801 aa15.8■□□□□ 0.12
TDP2-204ENST00000478507 A0A1W2PPC1 479 aa15.79■□□□□ 0.12
TDP2-204ENST00000478507 CAP2P40123 477 aa15.79■□□□□ 0.12
TDP2-204ENST00000478507 MCAMP43121 646 aa15.79■□□□□ 0.12
TDP2-204ENST00000478507 GCLCP48506 637 aaPredicted RBP15.79■□□□□ 0.12
TDP2-204ENST00000478507 COA7Q96BR5 231 aa15.79■□□□□ 0.12
TDP2-204ENST00000478507 TBC1D2Q9BYX2 928 aa15.79■□□□□ 0.12
TDP2-204ENST00000478507 MAST2Q6P0Q8 1798 aa15.79■□□□□ 0.12
TDP2-204ENST00000478507 A0A0C4DFX4 3053 aa15.78■□□□□ 0.12
TDP2-204ENST00000478507 TFRCP02786 760 aaKnown RBP15.78■□□□□ 0.12
TDP2-204ENST00000478507 LDHCP07864 332 aa15.78■□□□□ 0.12
TDP2-204ENST00000478507 HMGCS2P54868 508 aa15.78■□□□□ 0.12
TDP2-204ENST00000478507 GSTO1P78417 241 aa15.78■□□□□ 0.12
TDP2-204ENST00000478507 NEUROD6Q96NK8 337 aa15.78■□□□□ 0.12
TDP2-204ENST00000478507 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.78■□□□□ 0.12
TDP2-204ENST00000478507 ASCC2Q9H1I8 757 aaPredicted RBP15.78■□□□□ 0.12
TDP2-204ENST00000478507 PNMA6EA0A0J9YXQ4 647 aa15.77■□□□□ 0.12
TDP2-204ENST00000478507 EVI5O60447 810 aa15.77■□□□□ 0.12
TDP2-204ENST00000478507 MNX1P50219 401 aaPredicted RBP15.77■□□□□ 0.12
TDP2-204ENST00000478507 METTL16Q86W50 562 aaKnown RBP15.77■□□□□ 0.12
TDP2-204ENST00000478507 DIS3LQ8TF46 1054 aaKnown RBP15.77■□□□□ 0.12
TDP2-204ENST00000478507 PAWRQ96IZ0 340 aaKnown RBP15.77■□□□□ 0.12
TDP2-204ENST00000478507 DNAJC18Q9H819 358 aa15.77■□□□□ 0.12
TDP2-204ENST00000478507 MORF4L1Q9UBU8 362 aa15.77■□□□□ 0.12
TDP2-204ENST00000478507 HERC5Q9UII4 1024 aaKnown RBP15.77■□□□□ 0.12
TDP2-204ENST00000478507 MYO5AQ9Y4I1 1855 aaKnown RBP15.77■□□□□ 0.11
TDP2-204ENST00000478507 USP17L5A8MUK1 530 aa15.76■□□□□ 0.11
TDP2-204ENST00000478507 SOX1O00570 391 aaPredicted RBP15.76■□□□□ 0.11
TDP2-204ENST00000478507 HMGCRP04035 888 aa15.76■□□□□ 0.11
TDP2-204ENST00000478507 TRIM27P14373 513 aa15.76■□□□□ 0.11
TDP2-204ENST00000478507 JAG1P78504 1218 aa15.76■□□□□ 0.11
TDP2-204ENST00000478507 ANKLE1Q8NAG6 615 aa15.76■□□□□ 0.11
TDP2-204ENST00000478507 SH3RF3Q8TEJ3 882 aaPredicted RBP15.76■□□□□ 0.11
TDP2-204ENST00000478507 WDR18Q9BV38 432 aa15.76■□□□□ 0.11
TDP2-204ENST00000478507 RAI14Q9P0K7 980 aa15.76■□□□□ 0.11
TDP2-204ENST00000478507 DDX60LQ5H9U9 1706 aaKnown RBP15.75■□□□□ 0.11
TDP2-204ENST00000478507 TRIM32Q13049 653 aa15.75■□□□□ 0.11
TDP2-204ENST00000478507 PABPC4Q13310 644 aaKnown RBP eCLIP15.75■□□□□ 0.11
TDP2-204ENST00000478507 TEX11Q8IYF3 940 aa15.75■□□□□ 0.11
TDP2-204ENST00000478507 PI4KBQ9UBF8 816 aa15.75■□□□□ 0.11
TDP2-204ENST00000478507 TAOK2Q9UL54 1235 aa15.75■□□□□ 0.11
TDP2-204ENST00000478507 TNNQ9UQP3 1299 aa15.75■□□□□ 0.11
TDP2-204ENST00000478507 RPTORQ8N122 1335 aa15.74■□□□□ 0.11
TDP2-204ENST00000478507 GNAI2P04899 355 aa15.74■□□□□ 0.11
TDP2-204ENST00000478507 UQCRFS1P1P0C7P4 283 aa15.74■□□□□ 0.11
TDP2-204ENST00000478507 HOXA7P31268 230 aaPredicted RBP15.74■□□□□ 0.11
TDP2-204ENST00000478507 PPP4CP60510 307 aa15.74■□□□□ 0.11
TDP2-204ENST00000478507 MTMR2Q13614 643 aa15.74■□□□□ 0.11
TDP2-204ENST00000478507 MAP3K21Q5TCX8 1036 aa15.74■□□□□ 0.11
TDP2-204ENST00000478507 NECAB2Q7Z6G3 386 aa15.74■□□□□ 0.11
TDP2-204ENST00000478507 ADGRA1Q86SQ6 560 aa15.74■□□□□ 0.11
TDP2-204ENST00000478507 TRIB2Q92519 343 aa15.74■□□□□ 0.11
TDP2-204ENST00000478507 GDF15Q99988 308 aa15.74■□□□□ 0.11
TDP2-204ENST00000478507 DHX36Q9H2U1 1008 aaKnown RBP15.74■□□□□ 0.11
TDP2-204ENST00000478507 STAP2Q9UGK3 403 aa15.74■□□□□ 0.11
TDP2-204ENST00000478507 ASNSP08243 561 aa15.73■□□□□ 0.11
TDP2-204ENST00000478507 BACE1P56817 501 aa15.73■□□□□ 0.11
TDP2-204ENST00000478507 SHROOM1Q2M3G4 852 aaPredicted RBP15.73■□□□□ 0.11
TDP2-204ENST00000478507 GORABQ5T7V8 394 aa15.73■□□□□ 0.11
TDP2-204ENST00000478507 POTEEQ6S8J3 1075 aa15.73■□□□□ 0.11
TDP2-204ENST00000478507 AS3MTQ9HBK9 375 aa15.73■□□□□ 0.11
TDP2-204ENST00000478507 TXNRD2Q9NNW7 524 aa15.73■□□□□ 0.11
TDP2-204ENST00000478507 GPR108Q9NPR9 543 aa15.73■□□□□ 0.11
TDP2-204ENST00000478507 LRP2BPQ9P2M1 347 aa15.73■□□□□ 0.11
TDP2-204ENST00000478507 FLT1P17948 1338 aa15.72■□□□□ 0.11
TDP2-204ENST00000478507 DNAH12Q6ZR08 3092 aa15.72■□□□□ 0.11
TDP2-204ENST00000478507 PEX10O60683 326 aa15.72■□□□□ 0.11
TDP2-204ENST00000478507 BMP8BP34820 402 aa15.72■□□□□ 0.11
TDP2-204ENST00000478507 G3BP1Q13283 466 aaKnown RBP eCLIP15.72■□□□□ 0.11
TDP2-204ENST00000478507 POLA2Q14181 598 aa15.72■□□□□ 0.11
TDP2-204ENST00000478507 ATF7IPQ6VMQ6 1270 aa15.72■□□□□ 0.11
TDP2-204ENST00000478507 LRCH3Q96II8 777 aa15.72■□□□□ 0.11
TDP2-204ENST00000478507 P2RX7Q99572 595 aaKnown RBP15.72■□□□□ 0.11
TDP2-204ENST00000478507 HMX1Q9NP08 348 aaPredicted RBP15.72■□□□□ 0.11
TDP2-204ENST00000478507 AATFQ9NY61 560 aaKnown RBP eCLIP15.72■□□□□ 0.11
TDP2-204ENST00000478507 OGDHLQ9ULD0 1010 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms