RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 ANAPC4Q9UJX5 808 aa19.24■□□□□ 0.67
VHL-203ENST00000477538 DOCK1Q14185 1865 aa19.24■□□□□ 0.67
VHL-203ENST00000477538 MYH4Q9Y623 1939 aa19.23■□□□□ 0.67
VHL-203ENST00000477538 GLIS2Q9BZE0 524 aaPredicted RBP19.23■□□□□ 0.67
VHL-203ENST00000477538 NBPF3Q9H094 633 aa19.23■□□□□ 0.67
VHL-203ENST00000477538 EHD4Q9H223 541 aa19.23■□□□□ 0.67
VHL-203ENST00000477538 GREB1LQ9C091 1923 aaPredicted RBP19.23■□□□□ 0.67
VHL-203ENST00000477538 PAPPA2Q9BXP8 1791 aa19.22■□□□□ 0.67
VHL-203ENST00000477538 KIF3CO14782 793 aa19.22■□□□□ 0.67
VHL-203ENST00000477538 SLC3A2P08195 630 aaKnown RBP19.22■□□□□ 0.67
VHL-203ENST00000477538 NBPF12Q5TAG4 269 aaPredicted RBP19.22■□□□□ 0.67
VHL-203ENST00000477538 PRAMEF18Q5VWM3 479 aa19.22■□□□□ 0.67
VHL-203ENST00000477538 CHADLQ6NUI6 762 aa19.22■□□□□ 0.67
VHL-203ENST00000477538 TBC1D10CQ8IV04 446 aa19.22■□□□□ 0.67
VHL-203ENST00000477538 STK11IPQ8N1F8 1099 aa19.22■□□□□ 0.67
VHL-203ENST00000477538 CRACR2BQ8N4Y2 399 aaPredicted RBP19.22■□□□□ 0.67
VHL-203ENST00000477538 TRIM34Q9BYJ4 488 aa19.22■□□□□ 0.67
VHL-203ENST00000477538 SERPINB13Q9UIV8 391 aa19.22■□□□□ 0.67
VHL-203ENST00000477538 SSC5DA1L4H1 1573 aa19.21■□□□□ 0.67
VHL-203ENST00000477538 ZKSCAN1P17029 563 aaPredicted RBP19.21■□□□□ 0.67
VHL-203ENST00000477538 FOXP4Q8IVH2 680 aaPredicted RBP19.21■□□□□ 0.67
VHL-203ENST00000477538 ZNF784Q8NCA9 323 aaPredicted RBP19.21■□□□□ 0.67
VHL-203ENST00000477538 KCNB2Q92953 911 aa19.21■□□□□ 0.67
VHL-203ENST00000477538 HOOK2Q96ED9 719 aa19.21■□□□□ 0.67
VHL-203ENST00000477538 CDCA5Q96FF9 252 aa19.21■□□□□ 0.67
VHL-203ENST00000477538 DYNLL2Q96FJ2 89 aa19.21■□□□□ 0.67
VHL-203ENST00000477538 C22orf23Q9BZE7 217 aa19.21■□□□□ 0.67
VHL-203ENST00000477538 TAF6LQ9Y6J9 622 aa19.21■□□□□ 0.67
VHL-203ENST00000477538 GABPAQ06546 454 aa19.2■□□□□ 0.66
VHL-203ENST00000477538 SUPT20HL1Q3ZLR7 823 aa19.2■□□□□ 0.66
VHL-203ENST00000477538 AKNAD1Q5T1N1 836 aa19.2■□□□□ 0.66
VHL-203ENST00000477538 DLK2Q6UY11 383 aa19.2■□□□□ 0.66
VHL-203ENST00000477538 C16orf86Q6ZW13 317 aa19.2■□□□□ 0.66
VHL-203ENST00000477538 METTL16Q86W50 562 aaKnown RBP19.2■□□□□ 0.66
VHL-203ENST00000477538 RASEFQ8IZ41 740 aa19.2■□□□□ 0.66
VHL-203ENST00000477538 STAG1Q8WVM7 1258 aa19.2■□□□□ 0.66
VHL-203ENST00000477538 RNF41Q9H4P4 317 aaPredicted RBP19.2■□□□□ 0.66
VHL-203ENST00000477538 HERC5Q9UII4 1024 aaKnown RBP19.2■□□□□ 0.66
VHL-203ENST00000477538 FAM196BA6NMK8 535 aa19.19■□□□□ 0.66
VHL-203ENST00000477538 SLURP2P0DP57 97 aa19.19■□□□□ 0.66
VHL-203ENST00000477538 CDK8P49336 464 aa19.19■□□□□ 0.66
VHL-203ENST00000477538 PDE4BQ07343 736 aa19.19■□□□□ 0.66
VHL-203ENST00000477538 TSGA10IPQ3SY00 556 aa19.19■□□□□ 0.66
VHL-203ENST00000477538 MFSD6Q6ZSS7 791 aa19.19■□□□□ 0.66
VHL-203ENST00000477538 SLC44A5Q8NCS7 719 aa19.19■□□□□ 0.66
VHL-203ENST00000477538 DNAJC18Q9H819 358 aa19.19■□□□□ 0.66
VHL-203ENST00000477538 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.19■□□□□ 0.66
VHL-203ENST00000477538 SWAP70Q9UH65 585 aa19.19■□□□□ 0.66
VHL-203ENST00000477538 TAOK2Q9UL54 1235 aa19.19■□□□□ 0.66
VHL-203ENST00000477538 SNX14Q9Y5W7 946 aa19.19■□□□□ 0.66
VHL-203ENST00000477538 TACC3Q9Y6A5 838 aa19.19■□□□□ 0.66
VHL-203ENST00000477538 E7EWF7 191 aa19.18■□□□□ 0.66
VHL-203ENST00000477538 TBC1D12O60347 775 aa19.18■□□□□ 0.66
VHL-203ENST00000477538 PCP11498 1178 aaKnown RBP19.18■□□□□ 0.66
VHL-203ENST00000477538 NF2P35240 595 aa19.18■□□□□ 0.66
VHL-203ENST00000477538 RBM25P49756 843 aaKnown RBP19.18■□□□□ 0.66
VHL-203ENST00000477538 DCAF15Q66K64 600 aa19.18■□□□□ 0.66
VHL-203ENST00000477538 STOX1Q6ZVD7 989 aa19.18■□□□□ 0.66
VHL-203ENST00000477538 MIGA2Q7L4E1 593 aa19.18■□□□□ 0.66
VHL-203ENST00000477538 TBC1D32Q96NH3 1257 aa19.18■□□□□ 0.66
VHL-203ENST00000477538 ZNF287Q9HBT7 754 aa19.18■□□□□ 0.66
VHL-203ENST00000477538 INCENPQ9NQS7 918 aa19.18■□□□□ 0.66
VHL-203ENST00000477538 TOMM22Q9NS69 142 aa19.18■□□□□ 0.66
VHL-203ENST00000477538 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.18■□□□□ 0.66
VHL-203ENST00000477538 NEDD4P46934 1319 aa19.18■□□□□ 0.66
VHL-203ENST00000477538 PHIPQ8WWQ0 1821 aa19.17■□□□□ 0.66
VHL-203ENST00000477538 TRAF5O00463 557 aa19.17■□□□□ 0.66
VHL-203ENST00000477538 ORC4O43929 436 aa19.17■□□□□ 0.66
VHL-203ENST00000477538 PRDM1O75626 825 aa19.17■□□□□ 0.66
VHL-203ENST00000477538 FGRP09769 529 aa19.17■□□□□ 0.66
VHL-203ENST00000477538 SHMT1P34896 483 aa19.17■□□□□ 0.66
VHL-203ENST00000477538 ANAPC15P60006 121 aa19.17■□□□□ 0.66
VHL-203ENST00000477538 MAP3K10Q02779 954 aa19.17■□□□□ 0.66
VHL-203ENST00000477538 KRT32Q14532 448 aa19.17■□□□□ 0.66
VHL-203ENST00000477538 RRP12Q5JTH9 1297 aaKnown RBP19.17■□□□□ 0.66
VHL-203ENST00000477538 CNNM2Q9H8M5 875 aa19.17■□□□□ 0.66
VHL-203ENST00000477538 MKNK2Q9HBH9 465 aa19.17■□□□□ 0.66
VHL-203ENST00000477538 TRDNQ13061 729 aa19.16■□□□□ 0.66
VHL-203ENST00000477538 RASA1P20936 1047 aa19.15■□□□□ 0.66
VHL-203ENST00000477538 ADCK5Q3MIX3 580 aa19.15■□□□□ 0.66
VHL-203ENST00000477538 TATDN1Q6P1N9 297 aa19.15■□□□□ 0.66
VHL-203ENST00000477538 RALYLQ86SE5 291 aaKnown RBP19.15■□□□□ 0.66
VHL-203ENST00000477538 SMC1BQ8NDV3 1235 aa19.15■□□□□ 0.66
VHL-203ENST00000477538 NCOA7Q8NI08 942 aa19.15■□□□□ 0.66
VHL-203ENST00000477538 RBM46Q8TBY0 533 aaKnown RBP19.15■□□□□ 0.66
VHL-203ENST00000477538 ZNF341Q9BYN7 854 aa19.15■□□□□ 0.66
VHL-203ENST00000477538 KRT23Q9C075 422 aa19.15■□□□□ 0.66
VHL-203ENST00000477538 B4E1Z4 1266 aa19.14■□□□□ 0.65
VHL-203ENST00000477538 TOMM70O94826 608 aa19.14■□□□□ 0.65
VHL-203ENST00000477538 ITGBL1O95965 494 aaPredicted RBP19.14■□□□□ 0.65
VHL-203ENST00000477538 FMR1Q06787 632 aaKnown RBP eCLIP19.14■□□□□ 0.65
VHL-203ENST00000477538 ZNF444Q8N0Y2 327 aaPredicted RBP19.14■□□□□ 0.65
VHL-203ENST00000477538 IL17RAQ96F46 866 aa19.14■□□□□ 0.65
VHL-203ENST00000477538 JAKMIP1Q96N16 626 aaKnown RBP19.14■□□□□ 0.65
VHL-203ENST00000477538 ZNF408Q9H9D4 720 aa19.14■□□□□ 0.65
VHL-203ENST00000477538 PTPRFP10586 1907 aa19.13■□□□□ 0.65
VHL-203ENST00000477538 RANBP6O60518 1105 aaKnown RBP19.13■□□□□ 0.65
VHL-203ENST00000477538 PSMA5P28066 241 aa19.13■□□□□ 0.65
VHL-203ENST00000477538 PRKG1Q13976 671 aa19.13■□□□□ 0.65
VHL-203ENST00000477538 CERKLQ49MI3 558 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms