RNA–Protein interactions for RNA: ENST00000477392.1

LINC00996-201, long intergenic non-protein coding RNA 996, humanhuman

TSL 1 (best) BASIC

Gene LINC00996, Length 2,043 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-201ENST00000477392 TRIM29Q14134 588 aa18.18■□□□□ 0.5
LINC00996-201ENST00000477392 PTPAQ15257 358 aa18.18■□□□□ 0.5
LINC00996-201ENST00000477392 CTR9Q6PD62 1173 aa18.18■□□□□ 0.5
LINC00996-201ENST00000477392 MAP3K14Q99558 947 aa18.18■□□□□ 0.5
LINC00996-201ENST00000477392 TTC12Q9H892 705 aaPredicted RBP18.18■□□□□ 0.5
LINC00996-201ENST00000477392 TAOK2Q9UL54 1235 aa18.18■□□□□ 0.5
LINC00996-201ENST00000477392 MEX3CQ5U5Q3 659 aaKnown RBP18.17■□□□□ 0.5
LINC00996-201ENST00000477392 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.17■□□□□ 0.5
LINC00996-201ENST00000477392 WASF1Q92558 559 aa18.17■□□□□ 0.5
LINC00996-201ENST00000477392 A0A087WWV3 80 aa18.16■□□□□ 0.5
LINC00996-201ENST00000477392 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.16■□□□□ 0.5
LINC00996-201ENST00000477392 EVX2Q03828 476 aa18.16■□□□□ 0.5
LINC00996-201ENST00000477392 CRACR2BQ8N4Y2 399 aaPredicted RBP18.16■□□□□ 0.5
LINC00996-201ENST00000477392 ENAHQ8N8S7 591 aaPredicted RBP18.16■□□□□ 0.5
LINC00996-201ENST00000477392 FANCBQ8NB91 859 aa18.16■□□□□ 0.5
LINC00996-201ENST00000477392 MMP1P03956 469 aa18.16■□□□□ 0.5
LINC00996-201ENST00000477392 CMA1P23946 247 aa18.16■□□□□ 0.5
LINC00996-201ENST00000477392 MARCKSP29966 332 aaPredicted RBP18.16■□□□□ 0.5
LINC00996-201ENST00000477392 KIAA2012Q0VF49 1180 aa18.16■□□□□ 0.5
LINC00996-201ENST00000477392 GRAPQ13588 217 aa18.16■□□□□ 0.5
LINC00996-201ENST00000477392 GNL2Q13823 731 aaKnown RBP18.16■□□□□ 0.5
LINC00996-201ENST00000477392 PLA2G4DQ86XP0 818 aa18.16■□□□□ 0.5
LINC00996-201ENST00000477392 SEPT12Q8IYM1 358 aa18.16■□□□□ 0.5
LINC00996-201ENST00000477392 CMTR1Q8N1G2 835 aaKnown RBP18.16■□□□□ 0.5
LINC00996-201ENST00000477392 GRAPLQ8TC17 118 aaPredicted RBP18.16■□□□□ 0.5
LINC00996-201ENST00000477392 ERCC4Q92889 916 aaPredicted RBP18.16■□□□□ 0.5
LINC00996-201ENST00000477392 ZSCAN10Q96SZ4 725 aaPredicted RBP18.16■□□□□ 0.5
LINC00996-201ENST00000477392 AATFQ9NY61 560 aaKnown RBP eCLIP18.16■□□□□ 0.5
LINC00996-201ENST00000477392 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.16■□□□□ 0.5
LINC00996-201ENST00000477392 PFKFB1P16118 471 aa18.15■□□□□ 0.5
LINC00996-201ENST00000477392 TRIM22Q8IYM9 498 aa18.15■□□□□ 0.5
LINC00996-201ENST00000477392 CNBD1Q8NA66 436 aa18.15■□□□□ 0.5
LINC00996-201ENST00000477392 NUP133Q8WUM0 1156 aa18.15■□□□□ 0.5
LINC00996-201ENST00000477392 CCDC196A0A1B0GTZ2 297 aa18.15■□□□□ 0.5
LINC00996-201ENST00000477392 USP17L12C9JPN9 530 aa18.15■□□□□ 0.5
LINC00996-201ENST00000477392 USP17L21D6R901 530 aa18.15■□□□□ 0.5
LINC00996-201ENST00000477392 NPHP1O15259 732 aa18.15■□□□□ 0.5
LINC00996-201ENST00000477392 PPP6R2O75170 966 aa18.15■□□□□ 0.5
LINC00996-201ENST00000477392 PRDM1O75626 825 aa18.15■□□□□ 0.5
LINC00996-201ENST00000477392 DEXIO95424 95 aa18.15■□□□□ 0.5
LINC00996-201ENST00000477392 PCP11498 1178 aaKnown RBP18.15■□□□□ 0.5
LINC00996-201ENST00000477392 ZNF75DP51815 510 aa18.15■□□□□ 0.5
LINC00996-201ENST00000477392 SPC24Q8NBT2 197 aa18.15■□□□□ 0.5
LINC00996-201ENST00000477392 BCL11BQ9C0K0 894 aaPredicted RBP18.15■□□□□ 0.5
LINC00996-201ENST00000477392 KCNF1Q9H3M0 494 aa18.15■□□□□ 0.5
LINC00996-201ENST00000477392 DCP1AQ9NPI6 582 aaPredicted RBP18.15■□□□□ 0.5
LINC00996-201ENST00000477392 ANO10Q9NW15 660 aa18.15■□□□□ 0.5
LINC00996-201ENST00000477392 JAG2Q9Y219 1238 aa18.15■□□□□ 0.5
LINC00996-201ENST00000477392 NOSTRINQ8IVI9 506 aa18.14■□□□□ 0.49
LINC00996-201ENST00000477392 CRNKL1Q9BZJ0 848 aaKnown RBP18.14■□□□□ 0.49
LINC00996-201ENST00000477392 KCNJ14Q9UNX9 436 aa18.14■□□□□ 0.49
LINC00996-201ENST00000477392 ZNF202O95125 648 aa18.13■□□□□ 0.49
LINC00996-201ENST00000477392 ADRA2BP18089 450 aa18.13■□□□□ 0.49
LINC00996-201ENST00000477392 PRR5LQ6MZQ0 368 aa18.13■□□□□ 0.49
LINC00996-201ENST00000477392 DIS3L2Q8IYB7 885 aaKnown RBP18.13■□□□□ 0.49
LINC00996-201ENST00000477392 CCDC82Q8N4S0 544 aa18.13■□□□□ 0.49
LINC00996-201ENST00000477392 SDF4Q9BRK5 362 aa18.13■□□□□ 0.49
LINC00996-201ENST00000477392 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.13■□□□□ 0.49
LINC00996-201ENST00000477392 BTBD18B2RXH4 712 aa18.13■□□□□ 0.49
LINC00996-201ENST00000477392 ORC4O43929 436 aa18.13■□□□□ 0.49
LINC00996-201ENST00000477392 TMED8Q6PL24 325 aaPredicted RBP18.13■□□□□ 0.49
LINC00996-201ENST00000477392 SHC4Q6S5L8 630 aa18.13■□□□□ 0.49
LINC00996-201ENST00000477392 DHX40Q8IX18 779 aaKnown RBP18.13■□□□□ 0.49
LINC00996-201ENST00000477392 PIBF1Q8WXW3 757 aa18.13■□□□□ 0.49
LINC00996-201ENST00000477392 SHISA4Q96DD7 197 aa18.13■□□□□ 0.49
LINC00996-201ENST00000477392 KIAA1468Q9P260 1216 aa18.13■□□□□ 0.49
LINC00996-201ENST00000477392 HPSEQ9Y251 543 aa18.13■□□□□ 0.49
LINC00996-201ENST00000477392 FAM237AA0A1B0GTK4 181 aa18.12■□□□□ 0.49
LINC00996-201ENST00000477392 CYP2D6P10635 497 aa18.12■□□□□ 0.49
LINC00996-201ENST00000477392 FUT2Q10981 343 aa18.12■□□□□ 0.49
LINC00996-201ENST00000477392 JMYQ8N9B5 988 aa18.12■□□□□ 0.49
LINC00996-201ENST00000477392 RNF26Q9BY78 433 aaPredicted RBP18.12■□□□□ 0.49
LINC00996-201ENST00000477392 ATP8A2Q9NTI2 1148 aa18.12■□□□□ 0.49
LINC00996-201ENST00000477392 LEMD3Q9Y2U8 911 aa18.12■□□□□ 0.49
LINC00996-201ENST00000477392 XDHP47989 1333 aa18.12■□□□□ 0.49
LINC00996-201ENST00000477392 NAV1Q8NEY1 1877 aa18.11■□□□□ 0.49
LINC00996-201ENST00000477392 TOB1P50616 345 aaPredicted RBP18.11■□□□□ 0.49
LINC00996-201ENST00000477392 PPP2R5BQ15173 497 aa18.11■□□□□ 0.49
LINC00996-201ENST00000477392 IFIT1BQ5T764 474 aaKnown RBP18.11■□□□□ 0.49
LINC00996-201ENST00000477392 SARM1Q6SZW1 724 aa18.11■□□□□ 0.49
LINC00996-201ENST00000477392 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.11■□□□□ 0.49
LINC00996-201ENST00000477392 TRIM5Q9C035 493 aa18.11■□□□□ 0.49
LINC00996-201ENST00000477392 FOXP1Q9H334 677 aaPredicted RBP18.11■□□□□ 0.49
LINC00996-201ENST00000477392 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.11■□□□□ 0.49
LINC00996-201ENST00000477392 ANKIB1Q9P2G1 1089 aa18.11■□□□□ 0.49
LINC00996-201ENST00000477392 TRPC5Q9UL62 973 aaPredicted RBP18.11■□□□□ 0.49
LINC00996-201ENST00000477392 BRWD3Q6RI45 1802 aa18.11■□□□□ 0.49
LINC00996-201ENST00000477392 GOLGA6L6A8MZA4 724 aa18.11■□□□□ 0.49
LINC00996-201ENST00000477392 TPM3P06753 285 aa18.11■□□□□ 0.49
LINC00996-201ENST00000477392 SBK1Q52WX2 424 aa18.11■□□□□ 0.49
LINC00996-201ENST00000477392 RESP18Q5W5W9 173 aa18.11■□□□□ 0.49
LINC00996-201ENST00000477392 IQCA1Q86XH1 822 aa18.11■□□□□ 0.49
LINC00996-201ENST00000477392 CEP57L1Q8IYX8 460 aa18.11■□□□□ 0.49
LINC00996-201ENST00000477392 ANO8Q9HCE9 1232 aaPredicted RBP18.11■□□□□ 0.49
LINC00996-201ENST00000477392 ARPP21Q9UBL0 812 aaPredicted RBP18.11■□□□□ 0.49
LINC00996-201ENST00000477392 CDK5RAP2Q96SN8 1893 aa18.11■□□□□ 0.49
LINC00996-201ENST00000477392 GYS1P13807 737 aa18.1■□□□□ 0.49
LINC00996-201ENST00000477392 HSPA1LP34931 641 aa18.1■□□□□ 0.49
LINC00996-201ENST00000477392 TROAPQ12815 778 aa18.1■□□□□ 0.49
LINC00996-201ENST00000477392 SAFBQ15424 915 aaKnown RBP eCLIP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms