RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 FAM217BQ9NTX9 383 aaPredicted RBP7.75□□□□□ -1.17
CCDC30-209ENST00000477155 ARPP21Q9UBL0 812 aaPredicted RBP7.75□□□□□ -1.17
CCDC30-209ENST00000477155 CCDC88AQ3V6T2 1871 aa7.75□□□□□ -1.17
CCDC30-209ENST00000477155 FAM205AQ6ZU69 1335 aa7.75□□□□□ -1.17
CCDC30-209ENST00000477155 MYH2Q9UKX2 1941 aa7.75□□□□□ -1.17
CCDC30-209ENST00000477155 PDE4BQ07343 736 aa7.75□□□□□ -1.17
CCDC30-209ENST00000477155 IFIT1BQ5T764 474 aaKnown RBP7.75□□□□□ -1.17
CCDC30-209ENST00000477155 C12orf60Q5U649 245 aa7.75□□□□□ -1.17
CCDC30-209ENST00000477155 CPLX2Q6PUV4 134 aaKnown RBP7.75□□□□□ -1.17
CCDC30-209ENST00000477155 C8orf76Q96K31 380 aa7.75□□□□□ -1.17
CCDC30-209ENST00000477155 MKRN1Q9UHC7 482 aaKnown RBP7.75□□□□□ -1.17
CCDC30-209ENST00000477155 MTMR7Q9Y216 660 aa7.75□□□□□ -1.17
CCDC30-209ENST00000477155 DAGLAQ9Y4D2 1042 aa7.75□□□□□ -1.17
CCDC30-209ENST00000477155 SLX4Q8IY92 1834 aa7.75□□□□□ -1.17
CCDC30-209ENST00000477155 IARSP41252 1262 aaKnown RBP7.74□□□□□ -1.17
CCDC30-209ENST00000477155 KRT85P78386 507 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 ZNF654Q8IZM8 581 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 SLC26A6Q9BXS9 759 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 TMEM63CQ9P1W3 806 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 NRXN2Q9P2S2 1712 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 PDIA4P13667 645 aaKnown RBP7.74□□□□□ -1.17
CCDC30-209ENST00000477155 DPEP1P16444 411 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 RBM5P52756 815 aaKnown RBP eCLIP7.74□□□□□ -1.17
CCDC30-209ENST00000477155 TFAP4Q01664 338 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 GAS2L3Q86XJ1 694 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 SLF2Q8IX21 1173 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 AMOTL1Q8IY63 956 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 TMTC2Q8N394 836 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 C7orf43Q8WVR3 580 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 FTOQ9C0B1 505 aaKnown RBP eCLIP7.74□□□□□ -1.17
CCDC30-209ENST00000477155 PCDHAC2Q9Y5I4 1007 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 GOLGA6L3A6NEY3 463 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 ECE2O60344 883 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 RHBDL3P58872 404 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 RESTQ13127 1097 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 SEC23AQ15436 765 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 RTN1Q16799 776 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 SBK1Q52WX2 424 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 PODNQ7Z5L7 613 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 TTC6Q86TZ1 520 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 TTLL6Q8N841 843 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 FANCBQ8NB91 859 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 ALG1Q9BT22 464 aa7.74□□□□□ -1.17
CCDC30-209ENST00000477155 COL11A2P13942 1736 aaPredicted RBP7.74□□□□□ -1.17
CCDC30-209ENST00000477155 hCG_1642624A0A1W2PR95 340 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 NTRK3Q16288 839 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 SPATA32Q96LK8 384 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.73□□□□□ -1.17
CCDC30-209ENST00000477155 BAZ2BQ9UIF8 2168 aaKnown RBP7.73□□□□□ -1.17
CCDC30-209ENST00000477155 USP17L3A6NCW0 530 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 USP17L4A6NCW7 530 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 ZBTB22O15209 634 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 PPIP5K2O43314 1243 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 FGRP09769 529 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 SSRP1Q08945 709 aaKnown RBP7.73□□□□□ -1.17
CCDC30-209ENST00000477155 ZSCAN23Q3MJ62 389 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 USP17L1Q7RTZ2 530 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 ZNF444Q8N0Y2 327 aaPredicted RBP7.73□□□□□ -1.17
CCDC30-209ENST00000477155 FBXO18Q8NFZ0 1043 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 PIBF1Q8WXW3 757 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 FAM163AQ96GL9 167 aaPredicted RBP7.73□□□□□ -1.17
CCDC30-209ENST00000477155 ZSCAN16Q9H4T2 348 aaPredicted RBP7.73□□□□□ -1.17
CCDC30-209ENST00000477155 USP40Q9NVE5 1235 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 CDKL5O76039 1030 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 MBD3O95983 291 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 PLCG2P16885 1265 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 GUCY1A2P33402 732 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 CACNB3P54284 484 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 TMED8Q6PL24 325 aaPredicted RBP7.73□□□□□ -1.17
CCDC30-209ENST00000477155 CATIPQ7Z7H3 387 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 DUOX1Q9NRD9 1551 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 FLT1P17948 1338 aa7.73□□□□□ -1.17
CCDC30-209ENST00000477155 SYCE3A1L190 88 aa7.72□□□□□ -1.17
CCDC30-209ENST00000477155 GOLGA6L4A6NEF3 574 aa7.72□□□□□ -1.17
CCDC30-209ENST00000477155 ORC4O43929 436 aa7.72□□□□□ -1.17
CCDC30-209ENST00000477155 UBE2HP62256 183 aa7.72□□□□□ -1.17
CCDC30-209ENST00000477155 R3HDM1Q15032 1099 aaKnown RBP7.72□□□□□ -1.17
CCDC30-209ENST00000477155 TSPY3P0CV98 308 aa7.72□□□□□ -1.17
CCDC30-209ENST00000477155 TSPY8P0CW00 308 aa7.72□□□□□ -1.17
CCDC30-209ENST00000477155 SLURP2P0DP57 97 aa7.72□□□□□ -1.17
CCDC30-209ENST00000477155 SLC16A10Q8TF71 515 aa7.72□□□□□ -1.17
CCDC30-209ENST00000477155 TEKT1Q969V4 418 aa7.72□□□□□ -1.17
CCDC30-209ENST00000477155 ZNF277Q9NRM2 450 aaPredicted RBP7.72□□□□□ -1.17
CCDC30-209ENST00000477155 STX8Q9UNK0 236 aa7.72□□□□□ -1.17
CCDC30-209ENST00000477155 GAKO14976 1311 aa7.72□□□□□ -1.17
CCDC30-209ENST00000477155 PCP11498 1178 aaKnown RBP7.72□□□□□ -1.17
CCDC30-209ENST00000477155 KCNA3P22001 575 aa7.72□□□□□ -1.17
CCDC30-209ENST00000477155 TCP10Q12799 353 aa7.72□□□□□ -1.17
CCDC30-209ENST00000477155 CSPP1Q1MSJ5 1256 aa7.72□□□□□ -1.17
CCDC30-209ENST00000477155 KRT40Q6A162 431 aa7.72□□□□□ -1.17
CCDC30-209ENST00000477155 LEO1Q8WVC0 666 aaPredicted RBP7.72□□□□□ -1.17
CCDC30-209ENST00000477155 USP28Q96RU2 1077 aa7.72□□□□□ -1.17
CCDC30-209ENST00000477155 SCAND2PQ9GZW5 306 aaPredicted RBP7.72□□□□□ -1.17
CCDC30-209ENST00000477155 DDX4Q9NQI0 724 aaKnown RBP7.72□□□□□ -1.17
CCDC30-209ENST00000477155 IL17RBQ9NRM6 502 aa7.72□□□□□ -1.17
CCDC30-209ENST00000477155 LRRC37AA6NMS7 1700 aa7.71□□□□□ -1.17
CCDC30-209ENST00000477155 RAD17O75943 681 aa7.71□□□□□ -1.17
CCDC30-209ENST00000477155 CRKP46108 304 aa7.71□□□□□ -1.17
CCDC30-209ENST00000477155 CDK8P49336 464 aa7.71□□□□□ -1.17
CCDC30-209ENST00000477155 GNL2Q13823 731 aaKnown RBP7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms