RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 TNP2Q05952 138 aa10.3□□□□□ -0.76
CHD6-207ENST00000476641 AIMP1Q12904 312 aaKnown RBP10.3□□□□□ -0.76
CHD6-207ENST00000476641 ARSJQ5FYB0 599 aaPredicted RBP10.3□□□□□ -0.76
CHD6-207ENST00000476641 NMRK2Q9NPI5 230 aa10.3□□□□□ -0.76
CHD6-207ENST00000476641 ZNF652Q9Y2D9 606 aa10.3□□□□□ -0.76
CHD6-207ENST00000476641 A0A1W2PNR3 127 aa10.29□□□□□ -0.76
CHD6-207ENST00000476641 PDE6BP35913 854 aa10.29□□□□□ -0.76
CHD6-207ENST00000476641 SUSD4Q5VX71 490 aa10.29□□□□□ -0.76
CHD6-207ENST00000476641 PRPF40BQ6NWY9 871 aaKnown RBP10.29□□□□□ -0.76
CHD6-207ENST00000476641 KIF6Q6ZMV9 814 aa10.29□□□□□ -0.76
CHD6-207ENST00000476641 XAGE3Q8WTP9 111 aa10.29□□□□□ -0.76
CHD6-207ENST00000476641 TRIM11Q96F44 468 aa10.29□□□□□ -0.76
CHD6-207ENST00000476641 AVENQ9NQS1 362 aaPredicted RBP10.29□□□□□ -0.76
CHD6-207ENST00000476641 CHPF2Q9P2E5 772 aa10.29□□□□□ -0.76
CHD6-207ENST00000476641 ERVV-1B6SEH8 477 aa10.28□□□□□ -0.76
CHD6-207ENST00000476641 ELL2O00472 640 aaPredicted RBP10.28□□□□□ -0.76
CHD6-207ENST00000476641 ZNF853P0CG23 659 aa10.28□□□□□ -0.76
CHD6-207ENST00000476641 COPS6Q7L5N1 327 aa10.28□□□□□ -0.76
CHD6-207ENST00000476641 SYNE4Q8N205 404 aa10.28□□□□□ -0.76
CHD6-207ENST00000476641 MRS2Q9HD23 443 aa10.28□□□□□ -0.76
CHD6-207ENST00000476641 BABAM1Q9NWV8 329 aa10.28□□□□□ -0.76
CHD6-207ENST00000476641 NTSR2O95665 410 aa10.27□□□□□ -0.77
CHD6-207ENST00000476641 GATA4P43694 442 aa10.27□□□□□ -0.77
CHD6-207ENST00000476641 SMTNP53814 917 aa10.27□□□□□ -0.77
CHD6-207ENST00000476641 PCBP4P57723 403 aaKnown RBP10.27□□□□□ -0.77
CHD6-207ENST00000476641 ZMYM1Q5SVZ6 1142 aa10.27□□□□□ -0.77
CHD6-207ENST00000476641 HDGFL1Q5TGJ6 251 aa10.27□□□□□ -0.77
CHD6-207ENST00000476641 DUSP27Q5VZP5 1158 aa10.27□□□□□ -0.77
CHD6-207ENST00000476641 STYK1Q6J9G0 422 aa10.27□□□□□ -0.77
CHD6-207ENST00000476641 TPTE2Q6XPS3 522 aa10.27□□□□□ -0.77
CHD6-207ENST00000476641 ZNF34Q8IZ26 560 aa10.27□□□□□ -0.77
CHD6-207ENST00000476641 TSR2Q969E8 191 aaKnown RBP10.27□□□□□ -0.77
CHD6-207ENST00000476641 PLVAPQ9BX97 442 aa10.27□□□□□ -0.77
CHD6-207ENST00000476641 PRR12Q9ULL5 1215 aa10.27□□□□□ -0.77
CHD6-207ENST00000476641 ARFGEF1Q9Y6D6 1849 aa10.27□□□□□ -0.77
CHD6-207ENST00000476641 TNRC6CQ9HCJ0 1690 aaKnown RBP10.27□□□□□ -0.77
CHD6-207ENST00000476641 KLRG2A4D1S0 409 aaPredicted RBP10.26□□□□□ -0.77
CHD6-207ENST00000476641 ANP32CO43423 234 aa10.26□□□□□ -0.77
CHD6-207ENST00000476641 ZNF468Q5VIY5 522 aaPredicted RBP10.26□□□□□ -0.77
CHD6-207ENST00000476641 TSPYL6Q8N831 410 aa10.26□□□□□ -0.77
CHD6-207ENST00000476641 C8orf58Q8NAV2 365 aa10.26□□□□□ -0.77
CHD6-207ENST00000476641 C7orf43Q8WVR3 580 aa10.26□□□□□ -0.77
CHD6-207ENST00000476641 MASTLQ96GX5 879 aa10.26□□□□□ -0.77
CHD6-207ENST00000476641 DLEC1Q9Y238 1755 aa10.26□□□□□ -0.77
CHD6-207ENST00000476641 SLX4Q8IY92 1834 aa10.26□□□□□ -0.77
CHD6-207ENST00000476641 TCERG1O14776 1098 aaKnown RBP10.25□□□□□ -0.77
CHD6-207ENST00000476641 SPATA31C1P0DKV0 1188 aa10.25□□□□□ -0.77
CHD6-207ENST00000476641 NPR1P16066 1061 aa10.25□□□□□ -0.77
CHD6-207ENST00000476641 DDX21Q9NR30 783 aaKnown RBP eCLIP10.25□□□□□ -0.77
CHD6-207ENST00000476641 IFT57Q9NWB7 429 aa10.25□□□□□ -0.77
CHD6-207ENST00000476641 SERTAD1Q9UHV2 236 aa10.25□□□□□ -0.77
CHD6-207ENST00000476641 GJA3Q9Y6H8 435 aa10.25□□□□□ -0.77
CHD6-207ENST00000476641 FAM157BP0CG42 384 aa10.24□□□□□ -0.77
CHD6-207ENST00000476641 HCLS1P14317 486 aaPredicted RBP10.24□□□□□ -0.77
CHD6-207ENST00000476641 LMNB1P20700 586 aa10.24□□□□□ -0.77
CHD6-207ENST00000476641 IRF5Q13568 498 aa10.23□□□□□ -0.77
CHD6-207ENST00000476641 CRY2Q49AN0 593 aa10.23□□□□□ -0.77
CHD6-207ENST00000476641 NLRP10Q86W26 655 aa10.23□□□□□ -0.77
CHD6-207ENST00000476641 ZNF295-AS1Q8N0V1 137 aa10.23□□□□□ -0.77
CHD6-207ENST00000476641 ZIC5Q96T25 663 aa10.23□□□□□ -0.77
CHD6-207ENST00000476641 UTP14AQ9BVJ6 771 aaKnown RBP10.23□□□□□ -0.77
CHD6-207ENST00000476641 NYXQ9GZU5 481 aa10.23□□□□□ -0.77
CHD6-207ENST00000476641 TAOK3Q9H2K8 898 aa10.23□□□□□ -0.77
CHD6-207ENST00000476641 PHAXQ9H814 394 aaKnown RBP10.23□□□□□ -0.77
CHD6-207ENST00000476641 ZNF277Q9NRM2 450 aaPredicted RBP10.23□□□□□ -0.77
CHD6-207ENST00000476641 ZDHHC3Q9NYG2 299 aa10.23□□□□□ -0.77
CHD6-207ENST00000476641 NUP98P52948 1817 aa10.22□□□□□ -0.77
CHD6-207ENST00000476641 GNAI1P63096 354 aa10.22□□□□□ -0.77
CHD6-207ENST00000476641 TCIRG1Q13488 830 aa10.22□□□□□ -0.77
CHD6-207ENST00000476641 WWC1Q8IX03 1113 aa10.22□□□□□ -0.77
CHD6-207ENST00000476641 PRM3Q9NNZ6 103 aa10.22□□□□□ -0.77
CHD6-207ENST00000476641 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.21□□□□□ -0.77
CHD6-207ENST00000476641 HOXB7P09629 217 aa10.21□□□□□ -0.77
CHD6-207ENST00000476641 PARP10Q53GL7 1025 aa10.21□□□□□ -0.77
CHD6-207ENST00000476641 CCDC93Q567U6 631 aa10.21□□□□□ -0.77
CHD6-207ENST00000476641 FAM9BQ8IZU0 186 aa10.21□□□□□ -0.77
CHD6-207ENST00000476641 PLBD2Q8NHP8 589 aa10.21□□□□□ -0.77
CHD6-207ENST00000476641 JARID2Q92833 1246 aaPredicted RBP10.21□□□□□ -0.77
CHD6-207ENST00000476641 KRTAP9-2Q9BYQ4 174 aa10.21□□□□□ -0.77
CHD6-207ENST00000476641 MARK1Q9P0L2 795 aa10.21□□□□□ -0.77
CHD6-207ENST00000476641 DBF4Q9UBU7 674 aaPredicted RBP10.21□□□□□ -0.77
CHD6-207ENST00000476641 IQSEC3Q9UPP2 1182 aaPredicted RBP10.21□□□□□ -0.77
CHD6-207ENST00000476641 USP3Q9Y6I4 520 aa10.21□□□□□ -0.77
CHD6-207ENST00000476641 IBTKQ9P2D0 1353 aaPredicted RBP10.21□□□□□ -0.78
CHD6-207ENST00000476641 SNED1Q8TER0 1413 aa10.21□□□□□ -0.78
CHD6-207ENST00000476641 SBF1O95248 1867 aa10.21□□□□□ -0.78
CHD6-207ENST00000476641 A6NJY4 79 aa10.2□□□□□ -0.78
CHD6-207ENST00000476641 CDK2AP1O14519 115 aa10.2□□□□□ -0.78
CHD6-207ENST00000476641 DDNO94850 711 aaPredicted RBP10.2□□□□□ -0.78
CHD6-207ENST00000476641 HTRA3P83110 453 aa10.2□□□□□ -0.78
CHD6-207ENST00000476641 VAC14Q08AM6 782 aa10.2□□□□□ -0.78
CHD6-207ENST00000476641 CACNA1SQ13698 1873 aa10.2□□□□□ -0.78
CHD6-207ENST00000476641 PPP1R42Q7Z4L9 355 aa10.2□□□□□ -0.78
CHD6-207ENST00000476641 PLPP7Q8NBV4 271 aa10.2□□□□□ -0.78
CHD6-207ENST00000476641 RPGRQ92834 1020 aaKnown RBP10.2□□□□□ -0.78
CHD6-207ENST00000476641 ISCA1Q9BUE6 129 aa10.2□□□□□ -0.78
CHD6-207ENST00000476641 ZNF541Q9H0D2 1346 aa10.2□□□□□ -0.78
CHD6-207ENST00000476641 LTBP3Q9NS15 1303 aa10.2□□□□□ -0.78
CHD6-207ENST00000476641 TRMT112Q9UI30 125 aaKnown RBP10.2□□□□□ -0.78
CHD6-207ENST00000476641 COL4A5P29400 1685 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms