RNA–Protein interactions for RNA: ENST00000476581.6

XPC-205, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 1 (best)

Gene XPC, Length 2,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-205ENST00000476581 PSMD1Q99460 953 aa14.1□□□□□ -0.15
XPC-205ENST00000476581 SPON1Q9HCB6 807 aa14.1□□□□□ -0.15
XPC-205ENST00000476581 MKRN1Q9UHC7 482 aaKnown RBP14.1□□□□□ -0.15
XPC-205ENST00000476581 SAP30BPQ9UHR5 308 aaKnown RBP14.1□□□□□ -0.15
XPC-205ENST00000476581 USP17L12C9JPN9 530 aa14.09□□□□□ -0.15
XPC-205ENST00000476581 USP17L21D6R901 530 aa14.09□□□□□ -0.15
XPC-205ENST00000476581 PPFIA3O75145 1194 aa14.09□□□□□ -0.15
XPC-205ENST00000476581 EXOSC10Q01780 885 aaKnown RBP14.09□□□□□ -0.15
XPC-205ENST00000476581 MAPKAPK5Q8IW41 473 aa14.09□□□□□ -0.15
XPC-205ENST00000476581 VGLL3A8MV65 326 aa14.09□□□□□ -0.15
XPC-205ENST00000476581 CTIFO43310 598 aaKnown RBP14.09□□□□□ -0.15
XPC-205ENST00000476581 STK3Q13188 491 aa14.09□□□□□ -0.15
XPC-205ENST00000476581 ALX1Q15699 326 aa14.09□□□□□ -0.15
XPC-205ENST00000476581 MB21D2Q8IYB1 491 aaPredicted RBP14.09□□□□□ -0.15
XPC-205ENST00000476581 PSME4Q14997 1843 aa14.08□□□□□ -0.15
XPC-205ENST00000476581 USP17L3A6NCW0 530 aa14.08□□□□□ -0.15
XPC-205ENST00000476581 USP17L4A6NCW7 530 aa14.08□□□□□ -0.15
XPC-205ENST00000476581 PSMD14O00487 310 aa14.08□□□□□ -0.15
XPC-205ENST00000476581 IGSF3O75054 1194 aa14.08□□□□□ -0.15
XPC-205ENST00000476581 CDK11BP21127 795 aaKnown RBP14.08□□□□□ -0.15
XPC-205ENST00000476581 USP17L1Q7RTZ2 530 aa14.08□□□□□ -0.15
XPC-205ENST00000476581 FAM184AQ8NB25 1140 aa14.08□□□□□ -0.15
XPC-205ENST00000476581 DDX4Q9NQI0 724 aaKnown RBP14.08□□□□□ -0.15
XPC-205ENST00000476581 GPR75-ASB3A0A0A6YYF3 556 aa14.08□□□□□ -0.16
XPC-205ENST00000476581 PPARAQ07869 468 aa14.08□□□□□ -0.16
XPC-205ENST00000476581 STRIP1Q5VSL9 837 aa14.08□□□□□ -0.16
XPC-205ENST00000476581 TBC1D22AQ8WUA7 517 aa14.08□□□□□ -0.16
XPC-205ENST00000476581 BRF1Q92994 677 aa14.08□□□□□ -0.16
XPC-205ENST00000476581 ZKSCAN3Q9BRR0 538 aa14.08□□□□□ -0.16
XPC-205ENST00000476581 CTNNA3Q9UI47 895 aa14.08□□□□□ -0.16
XPC-205ENST00000476581 GAKO14976 1311 aa14.08□□□□□ -0.16
XPC-205ENST00000476581 PLCD1P51178 756 aa14.08□□□□□ -0.16
XPC-205ENST00000476581 APOBRQ0VD83 1088 aa14.08□□□□□ -0.16
XPC-205ENST00000476581 CC2D2BQ6DHV5 1058 aa14.08□□□□□ -0.16
XPC-205ENST00000476581 APOBEC3HQ6NTF7 200 aaKnown RBP14.08□□□□□ -0.16
XPC-205ENST00000476581 DYNLL2Q96FJ2 89 aa14.08□□□□□ -0.16
XPC-205ENST00000476581 NAV1Q8NEY1 1877 aa14.07□□□□□ -0.16
XPC-205ENST00000476581 TIAM2Q8IVF5 1701 aa14.07□□□□□ -0.16
XPC-205ENST00000476581 LAMB1P07942 1786 aa14.07□□□□□ -0.16
XPC-205ENST00000476581 GNAT2P19087 354 aa14.07□□□□□ -0.16
XPC-205ENST00000476581 PSMA5P28066 241 aa14.07□□□□□ -0.16
XPC-205ENST00000476581 IARSP41252 1262 aaKnown RBP14.07□□□□□ -0.16
XPC-205ENST00000476581 SLC20A2Q08357 652 aa14.07□□□□□ -0.16
XPC-205ENST00000476581 RRP12Q5JTH9 1297 aaKnown RBP14.07□□□□□ -0.16
XPC-205ENST00000476581 ZFPM1Q8IX07 1006 aa14.07□□□□□ -0.16
XPC-205ENST00000476581 SYAP1Q96A49 352 aaPredicted RBP14.07□□□□□ -0.16
XPC-205ENST00000476581 NFIAQ12857 509 aa14.07□□□□□ -0.16
XPC-205ENST00000476581 DHX32Q7L7V1 743 aaKnown RBP14.07□□□□□ -0.16
XPC-205ENST00000476581 SLC44A5Q8NCS7 719 aa14.07□□□□□ -0.16
XPC-205ENST00000476581 TAOK3Q9H2K8 898 aa14.07□□□□□ -0.16
XPC-205ENST00000476581 MCM9Q9NXL9 1143 aa14.07□□□□□ -0.16
XPC-205ENST00000476581 SCAF8Q9UPN6 1271 aaKnown RBP14.07□□□□□ -0.16
XPC-205ENST00000476581 DDX60LQ5H9U9 1706 aaKnown RBP14.06□□□□□ -0.16
XPC-205ENST00000476581 FOCADQ5VW36 1801 aa14.06□□□□□ -0.16
XPC-205ENST00000476581 PICALMQ13492 652 aa14.06□□□□□ -0.16
XPC-205ENST00000476581 CCDC83Q8IWF9 413 aa14.06□□□□□ -0.16
XPC-205ENST00000476581 CHAMP1Q96JM3 812 aa14.06□□□□□ -0.16
XPC-205ENST00000476581 ZSWIM5Q9P217 1185 aa14.06□□□□□ -0.16
XPC-205ENST00000476581 LIMCH1Q9UPQ0 1083 aa14.06□□□□□ -0.16
XPC-205ENST00000476581 ARFGEF1Q9Y6D6 1849 aa14.06□□□□□ -0.16
XPC-205ENST00000476581 RIOK3O14730 519 aaKnown RBP14.06□□□□□ -0.16
XPC-205ENST00000476581 KDM4AO75164 1064 aa14.06□□□□□ -0.16
XPC-205ENST00000476581 CRKP46108 304 aa14.06□□□□□ -0.16
XPC-205ENST00000476581 PPP4CP60510 307 aa14.06□□□□□ -0.16
XPC-205ENST00000476581 IRX5P78411 483 aaPredicted RBP14.06□□□□□ -0.16
XPC-205ENST00000476581 KRT32Q14532 448 aa14.06□□□□□ -0.16
XPC-205ENST00000476581 CRNKL1Q9BZJ0 848 aaKnown RBP14.06□□□□□ -0.16
XPC-205ENST00000476581 TTC12Q9H892 705 aaPredicted RBP14.06□□□□□ -0.16
XPC-205ENST00000476581 ECM29Q5VYK3 1845 aa14.06□□□□□ -0.16
XPC-205ENST00000476581 ZMYM6O95789 1325 aa14.06□□□□□ -0.16
XPC-205ENST00000476581 MYH1P12882 1939 aa14.05□□□□□ -0.16
XPC-205ENST00000476581 PRC1O43663 620 aa14.05□□□□□ -0.16
XPC-205ENST00000476581 C17orf53Q8N3J3 647 aaPredicted RBP14.05□□□□□ -0.16
XPC-205ENST00000476581 SUPT20HQ8NEM7 779 aa14.05□□□□□ -0.16
XPC-205ENST00000476581 NMT2O60551 498 aa14.05□□□□□ -0.16
XPC-205ENST00000476581 WDHD1O75717 1129 aaPredicted RBP14.05□□□□□ -0.16
XPC-205ENST00000476581 USP5P45974 858 aa14.05□□□□□ -0.16
XPC-205ENST00000476581 GSTO1P78417 241 aa14.05□□□□□ -0.16
XPC-205ENST00000476581 CXCL9Q07325 125 aa14.05□□□□□ -0.16
XPC-205ENST00000476581 CUL4AQ13619 759 aa14.05□□□□□ -0.16
XPC-205ENST00000476581 AKNAD1Q5T1N1 836 aa14.05□□□□□ -0.16
XPC-205ENST00000476581 CDC42EP5Q6NZY7 148 aa14.05□□□□□ -0.16
XPC-205ENST00000476581 TEX11Q8IYF3 940 aa14.05□□□□□ -0.16
XPC-205ENST00000476581 FAM163AQ96GL9 167 aaPredicted RBP14.05□□□□□ -0.16
XPC-205ENST00000476581 SYT17Q9BSW7 474 aa14.05□□□□□ -0.16
XPC-205ENST00000476581 NACAP1Q9BZK3 213 aa14.05□□□□□ -0.16
XPC-205ENST00000476581 NCOA5Q9HCD5 579 aaKnown RBP14.05□□□□□ -0.16
XPC-205ENST00000476581 FLT1P17948 1338 aa14.05□□□□□ -0.16
XPC-205ENST00000476581 EGFRP00533 1210 aa14.04□□□□□ -0.16
XPC-205ENST00000476581 YBX3P16989 372 aaKnown RBP eCLIP14.04□□□□□ -0.16
XPC-205ENST00000476581 RXRAP19793 462 aa14.04□□□□□ -0.16
XPC-205ENST00000476581 TOMM22Q9NS69 142 aa14.04□□□□□ -0.16
XPC-205ENST00000476581 SLFN14P0C7P3 912 aa14.04□□□□□ -0.16
XPC-205ENST00000476581 SYCP1Q15431 976 aa14.04□□□□□ -0.16
XPC-205ENST00000476581 NCOA7Q8NI08 942 aa14.04□□□□□ -0.16
XPC-205ENST00000476581 CCDC66A2RUB6 948 aa14.04□□□□□ -0.16
XPC-205ENST00000476581 RBM5P52756 815 aaKnown RBP eCLIP14.04□□□□□ -0.16
XPC-205ENST00000476581 FAM47AQ5JRC9 791 aa14.04□□□□□ -0.16
XPC-205ENST00000476581 STAG1Q8WVM7 1258 aa14.04□□□□□ -0.16
XPC-205ENST00000476581 PRMT6Q96LA8 375 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms