RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 PLXNB2O15031 1838 aa16.15■□□□□ 0.18
MRPL55-228ENST00000476267 FXR1P51114 621 aaKnown RBP eCLIP16.15■□□□□ 0.18
MRPL55-228ENST00000476267 TNNI3KQ59H18 835 aa16.15■□□□□ 0.18
MRPL55-228ENST00000476267 GORABQ5T7V8 394 aa16.15■□□□□ 0.18
MRPL55-228ENST00000476267 ADGRA1Q86SQ6 560 aa16.15■□□□□ 0.18
MRPL55-228ENST00000476267 SH3RF3Q8TEJ3 882 aaPredicted RBP16.15■□□□□ 0.18
MRPL55-228ENST00000476267 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.15■□□□□ 0.18
MRPL55-228ENST00000476267 RAI14Q9P0K7 980 aa16.15■□□□□ 0.18
MRPL55-228ENST00000476267 FPGT-TNNI3KV9GXZ4 949 aa16.15■□□□□ 0.18
MRPL55-228ENST00000476267 CAP2P40123 477 aa16.14■□□□□ 0.17
MRPL55-228ENST00000476267 FLT3LGP49771 235 aa16.14■□□□□ 0.17
MRPL55-228ENST00000476267 IRF5Q13568 498 aa16.14■□□□□ 0.17
MRPL55-228ENST00000476267 ZKSCAN2Q63HK3 967 aa16.14■□□□□ 0.17
MRPL55-228ENST00000476267 METTL16Q86W50 562 aaKnown RBP16.14■□□□□ 0.17
MRPL55-228ENST00000476267 NKX2-3Q8TAU0 364 aa16.14■□□□□ 0.17
MRPL55-228ENST00000476267 PXYLP1Q8TE99 480 aa16.14■□□□□ 0.17
MRPL55-228ENST00000476267 ZNF512BQ96KM6 892 aaPredicted RBP16.14■□□□□ 0.17
MRPL55-228ENST00000476267 DBNDD2Q9BQY9 259 aa16.14■□□□□ 0.17
MRPL55-228ENST00000476267 TBC1D2Q9BYX2 928 aa16.14■□□□□ 0.17
MRPL55-228ENST00000476267 DNAJC18Q9H819 358 aa16.14■□□□□ 0.17
MRPL55-228ENST00000476267 COLQQ9Y215 455 aaPredicted RBP16.14■□□□□ 0.17
MRPL55-228ENST00000476267 H0YGN5 161 aa16.13■□□□□ 0.17
MRPL55-228ENST00000476267 CYP2E1P05181 493 aaPredicted RBP16.13■□□□□ 0.17
MRPL55-228ENST00000476267 PPP4CP60510 307 aa16.13■□□□□ 0.17
MRPL55-228ENST00000476267 ATP8B2P98198 1209 aa16.13■□□□□ 0.17
MRPL55-228ENST00000476267 SPP2Q13103 211 aa16.13■□□□□ 0.17
MRPL55-228ENST00000476267 FAM110CQ1W6H9 321 aa16.13■□□□□ 0.17
MRPL55-228ENST00000476267 SH3D19Q5HYK7 790 aa16.13■□□□□ 0.17
MRPL55-228ENST00000476267 TEX11Q8IYF3 940 aa16.13■□□□□ 0.17
MRPL55-228ENST00000476267 ZNF280CQ8ND82 737 aa16.13■□□□□ 0.17
MRPL55-228ENST00000476267 SMCR8Q8TEV9 937 aaPredicted RBP16.13■□□□□ 0.17
MRPL55-228ENST00000476267 RNF208Q9H0X6 261 aa16.13■□□□□ 0.17
MRPL55-228ENST00000476267 UNC93B1Q9H1C4 597 aa16.13■□□□□ 0.17
MRPL55-228ENST00000476267 LRP2BPQ9P2M1 347 aa16.13■□□□□ 0.17
MRPL55-228ENST00000476267 HERC5Q9UII4 1024 aaKnown RBP16.13■□□□□ 0.17
MRPL55-228ENST00000476267 DDX60LQ5H9U9 1706 aaKnown RBP16.13■□□□□ 0.17
MRPL55-228ENST00000476267 TNPO2O14787 897 aaKnown RBP16.12■□□□□ 0.17
MRPL55-228ENST00000476267 ADCY3O60266 1144 aa16.12■□□□□ 0.17
MRPL55-228ENST00000476267 IGSF3O75054 1194 aa16.12■□□□□ 0.17
MRPL55-228ENST00000476267 UBXN2AP68543 259 aa16.12■□□□□ 0.17
MRPL55-228ENST00000476267 JAG1P78504 1218 aa16.12■□□□□ 0.17
MRPL55-228ENST00000476267 ANKRD13CQ8N6S4 541 aa16.12■□□□□ 0.17
MRPL55-228ENST00000476267 U2AF1L4Q8WU68 220 aaKnown RBP16.12■□□□□ 0.17
MRPL55-228ENST00000476267 SNRKQ9NRH2 765 aa16.12■□□□□ 0.17
MRPL55-228ENST00000476267 AATFQ9NY61 560 aaKnown RBP eCLIP16.12■□□□□ 0.17
MRPL55-228ENST00000476267 NOP58Q9Y2X3 529 aaKnown RBP16.12■□□□□ 0.17
MRPL55-228ENST00000476267 SZT2Q5T011 3432 aa16.12■□□□□ 0.17
MRPL55-228ENST00000476267 FLT1P17948 1338 aa16.12■□□□□ 0.17
MRPL55-228ENST00000476267 INHAP05111 366 aa16.11■□□□□ 0.17
MRPL55-228ENST00000476267 RLBP1P12271 317 aa16.11■□□□□ 0.17
MRPL55-228ENST00000476267 ELNP15502 786 aa16.11■□□□□ 0.17
MRPL55-228ENST00000476267 HMGCS2P54868 508 aa16.11■□□□□ 0.17
MRPL55-228ENST00000476267 NAA16Q6N069 864 aaPredicted RBP16.11■□□□□ 0.17
MRPL55-228ENST00000476267 DHX36Q9H2U1 1008 aaKnown RBP16.11■□□□□ 0.17
MRPL55-228ENST00000476267 PAK6Q9NQU5 681 aaPredicted RBP16.11■□□□□ 0.17
MRPL55-228ENST00000476267 PI4KBQ9UBF8 816 aa16.11■□□□□ 0.17
MRPL55-228ENST00000476267 DBNLQ9UJU6 430 aaKnown RBP16.11■□□□□ 0.17
MRPL55-228ENST00000476267 PNMA3Q9UL41 463 aa16.11■□□□□ 0.17
MRPL55-228ENST00000476267 ALPK3Q96L96 1907 aa16.1■□□□□ 0.17
MRPL55-228ENST00000476267 USP17L5A8MUK1 530 aa16.1■□□□□ 0.17
MRPL55-228ENST00000476267 ZBTB7BO15156 539 aaPredicted RBP16.1■□□□□ 0.17
MRPL55-228ENST00000476267 SGPL1O95470 568 aa16.1■□□□□ 0.17
MRPL55-228ENST00000476267 TTC39AQ5SRH9 613 aa16.1■□□□□ 0.17
MRPL55-228ENST00000476267 WDR18Q9BV38 432 aa16.1■□□□□ 0.17
MRPL55-228ENST00000476267 PRO3102Q9H379 93 aa16.1■□□□□ 0.17
MRPL55-228ENST00000476267 C1orf115Q9H7X2 142 aa16.1■□□□□ 0.17
MRPL55-228ENST00000476267 PIH1D3Q9NQM4 214 aaKnown RBP16.1■□□□□ 0.17
MRPL55-228ENST00000476267 TLR7Q9NYK1 1049 aaKnown RBP16.1■□□□□ 0.17
MRPL55-228ENST00000476267 DOCK3Q8IZD9 2030 aa16.1■□□□□ 0.17
MRPL55-228ENST00000476267 RANBP2P49792 3224 aaKnown RBP16.1■□□□□ 0.17
MRPL55-228ENST00000476267 SURF6O75683 361 aaKnown RBP16.09■□□□□ 0.17
MRPL55-228ENST00000476267 BAG3O95817 575 aa16.09■□□□□ 0.17
MRPL55-228ENST00000476267 ZAP70P43403 619 aa16.09■□□□□ 0.17
MRPL55-228ENST00000476267 GCLCP48506 637 aaPredicted RBP16.09■□□□□ 0.17
MRPL55-228ENST00000476267 SHROOM1Q2M3G4 852 aaPredicted RBP16.09■□□□□ 0.17
MRPL55-228ENST00000476267 CCDC158Q5M9N0 1113 aa16.09■□□□□ 0.17
MRPL55-228ENST00000476267 TGFBRAP1Q8WUH2 860 aa16.09■□□□□ 0.17
MRPL55-228ENST00000476267 ASCC2Q9H1I8 757 aaPredicted RBP16.09■□□□□ 0.17
MRPL55-228ENST00000476267 BIN2Q9UBW5 565 aaPredicted RBP16.09■□□□□ 0.17
MRPL55-228ENST00000476267 MYH1P12882 1939 aa16.08■□□□□ 0.16
MRPL55-228ENST00000476267 PLCG2P16885 1265 aa16.08■□□□□ 0.16
MRPL55-228ENST00000476267 MAPKAPK5Q8IW41 473 aa16.08■□□□□ 0.16
MRPL55-228ENST00000476267 EAF2Q96CJ1 260 aaPredicted RBP16.08■□□□□ 0.16
MRPL55-228ENST00000476267 CRISPLD2Q9H0B8 497 aa16.08■□□□□ 0.16
MRPL55-228ENST00000476267 AS3MTQ9HBK9 375 aa16.08■□□□□ 0.16
MRPL55-228ENST00000476267 MORF4L1Q9UBU8 362 aa16.08■□□□□ 0.16
MRPL55-228ENST00000476267 GJD2Q9UKL4 321 aa16.08■□□□□ 0.16
MRPL55-228ENST00000476267 FARP2O94887 1054 aaPredicted RBP16.07■□□□□ 0.16
MRPL55-228ENST00000476267 ASNSP08243 561 aa16.07■□□□□ 0.16
MRPL55-228ENST00000476267 CAPN2P17655 700 aa16.07■□□□□ 0.16
MRPL55-228ENST00000476267 HOXA7P31268 230 aaPredicted RBP16.07■□□□□ 0.16
MRPL55-228ENST00000476267 BACE1P56817 501 aa16.07■□□□□ 0.16
MRPL55-228ENST00000476267 PABPC4Q13310 644 aaKnown RBP eCLIP16.07■□□□□ 0.161e-6■■■■■ 30.4
MRPL55-228ENST00000476267 MTMR2Q13614 643 aa16.07■□□□□ 0.16
MRPL55-228ENST00000476267 FOXP4Q8IVH2 680 aaPredicted RBP16.07■□□□□ 0.16
MRPL55-228ENST00000476267 COA7Q96BR5 231 aa16.07■□□□□ 0.16
MRPL55-228ENST00000476267 NOL10Q9BSC4 688 aaKnown RBP16.07■□□□□ 0.16
MRPL55-228ENST00000476267 PALD1Q9ULE6 856 aa16.07■□□□□ 0.16
MRPL55-228ENST00000476267 DYNLL1P63167 89 aaKnown RBP16.06■□□□□ 0.16
MRPL55-228ENST00000476267 OS9Q13438 667 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms