RNA–Protein interactions for RNA: ENST00000475722.5

PRUNE1-210, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 3

Gene PRUNE1, Length 916 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-210ENST00000475722 TACC3Q9Y6A5 838 aa17.8■□□□□ 0.44
PRUNE1-210ENST00000475722 ROBO3Q96MS0 1386 aa17.79■□□□□ 0.44
PRUNE1-210ENST00000475722 LAMA4Q16363 1823 aa17.79■□□□□ 0.44
PRUNE1-210ENST00000475722 LAMB1P07942 1786 aa17.79■□□□□ 0.44
PRUNE1-210ENST00000475722 POLR2AP24928 1970 aaKnown RBP17.79■□□□□ 0.44
PRUNE1-210ENST00000475722 ADM5C9JUS6 153 aa17.79■□□□□ 0.44
PRUNE1-210ENST00000475722 SLC3A2P08195 630 aaKnown RBP17.79■□□□□ 0.44
PRUNE1-210ENST00000475722 ANAPC15P60006 121 aa17.79■□□□□ 0.44
PRUNE1-210ENST00000475722 GABPAQ06546 454 aa17.79■□□□□ 0.44
PRUNE1-210ENST00000475722 AKNAD1Q5T1N1 836 aa17.79■□□□□ 0.44
PRUNE1-210ENST00000475722 USP48Q86UV5 1035 aa17.79■□□□□ 0.44
PRUNE1-210ENST00000475722 METTL16Q86W50 562 aaKnown RBP17.79■□□□□ 0.44
PRUNE1-210ENST00000475722 FOXP4Q8IVH2 680 aaPredicted RBP17.79■□□□□ 0.44
PRUNE1-210ENST00000475722 STK11IPQ8N1F8 1099 aa17.79■□□□□ 0.44
PRUNE1-210ENST00000475722 STAG1Q8WVM7 1258 aa17.79■□□□□ 0.44
PRUNE1-210ENST00000475722 SERPINB13Q9UIV8 391 aa17.79■□□□□ 0.44
PRUNE1-210ENST00000475722 E7EWF7 191 aa17.78■□□□□ 0.44
PRUNE1-210ENST00000475722 FGRP09769 529 aa17.78■□□□□ 0.44
PRUNE1-210ENST00000475722 NBPF12Q5TAG4 269 aaPredicted RBP17.78■□□□□ 0.44
PRUNE1-210ENST00000475722 PRAMEF18Q5VWM3 479 aa17.78■□□□□ 0.44
PRUNE1-210ENST00000475722 MAP1SQ66K74 1059 aaPredicted RBP17.78■□□□□ 0.44
PRUNE1-210ENST00000475722 STOX1Q6ZVD7 989 aa17.78■□□□□ 0.44
PRUNE1-210ENST00000475722 C16orf86Q6ZW13 317 aa17.78■□□□□ 0.44
PRUNE1-210ENST00000475722 CDC37L1Q7L3B6 337 aa17.78■□□□□ 0.44
PRUNE1-210ENST00000475722 IL17RAQ96F46 866 aa17.78■□□□□ 0.44
PRUNE1-210ENST00000475722 RNF41Q9H4P4 317 aaPredicted RBP17.78■□□□□ 0.44
PRUNE1-210ENST00000475722 INCENPQ9NQS7 918 aa17.78■□□□□ 0.44
PRUNE1-210ENST00000475722 SLURP2P0DP57 97 aa17.77■□□□□ 0.44
PRUNE1-210ENST00000475722 YY1P25490 414 aa17.77■□□□□ 0.44
PRUNE1-210ENST00000475722 CDK8P49336 464 aa17.77■□□□□ 0.44
PRUNE1-210ENST00000475722 PDE4BQ07343 736 aa17.77■□□□□ 0.44
PRUNE1-210ENST00000475722 KRT32Q14532 448 aa17.77■□□□□ 0.44
PRUNE1-210ENST00000475722 DLK2Q6UY11 383 aa17.77■□□□□ 0.44
PRUNE1-210ENST00000475722 MFSD6Q6ZSS7 791 aa17.77■□□□□ 0.44
PRUNE1-210ENST00000475722 CRACR2BQ8N4Y2 399 aaPredicted RBP17.77■□□□□ 0.44
PRUNE1-210ENST00000475722 SLC44A5Q8NCS7 719 aa17.77■□□□□ 0.44
PRUNE1-210ENST00000475722 GLIS2Q9BZE0 524 aaPredicted RBP17.77■□□□□ 0.44
PRUNE1-210ENST00000475722 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.77■□□□□ 0.44
PRUNE1-210ENST00000475722 SIPA1L1O43166 1804 aa17.77■□□□□ 0.43
PRUNE1-210ENST00000475722 NEDD4P46934 1319 aa17.76■□□□□ 0.43
PRUNE1-210ENST00000475722 TBC1D12O60347 775 aa17.76■□□□□ 0.43
PRUNE1-210ENST00000475722 PCP11498 1178 aaKnown RBP17.76■□□□□ 0.43
PRUNE1-210ENST00000475722 MAP3K10Q02779 954 aa17.76■□□□□ 0.43
PRUNE1-210ENST00000475722 ADCK5Q3MIX3 580 aa17.76■□□□□ 0.43
PRUNE1-210ENST00000475722 DNAJC18Q9H819 358 aa17.76■□□□□ 0.43
PRUNE1-210ENST00000475722 SWAP70Q9UH65 585 aa17.76■□□□□ 0.43
PRUNE1-210ENST00000475722 HERC5Q9UII4 1024 aaKnown RBP17.76■□□□□ 0.43
PRUNE1-210ENST00000475722 TAOK2Q9UL54 1235 aa17.76■□□□□ 0.43
PRUNE1-210ENST00000475722 FAM196BA6NMK8 535 aa17.75■□□□□ 0.43
PRUNE1-210ENST00000475722 KIF3CO14782 793 aa17.75■□□□□ 0.43
PRUNE1-210ENST00000475722 ORC4O43929 436 aa17.75■□□□□ 0.43
PRUNE1-210ENST00000475722 PRDM1O75626 825 aa17.75■□□□□ 0.43
PRUNE1-210ENST00000475722 SHMT1P34896 483 aa17.75■□□□□ 0.43
PRUNE1-210ENST00000475722 SUPT20HL1Q3ZLR7 823 aa17.75■□□□□ 0.43
PRUNE1-210ENST00000475722 MIGA2Q7L4E1 593 aa17.75■□□□□ 0.43
PRUNE1-210ENST00000475722 HOOK2Q96ED9 719 aa17.75■□□□□ 0.43
PRUNE1-210ENST00000475722 JAKMIP1Q96N16 626 aaKnown RBP17.75■□□□□ 0.43
PRUNE1-210ENST00000475722 KIF2CQ99661 725 aa17.75■□□□□ 0.43
PRUNE1-210ENST00000475722 TRIM34Q9BYJ4 488 aa17.75■□□□□ 0.43
PRUNE1-210ENST00000475722 CNNM2Q9H8M5 875 aa17.75■□□□□ 0.43
PRUNE1-210ENST00000475722 MKNK2Q9HBH9 465 aa17.75■□□□□ 0.43
PRUNE1-210ENST00000475722 ZNF287Q9HBT7 754 aa17.75■□□□□ 0.43
PRUNE1-210ENST00000475722 TRDNQ13061 729 aa17.74■□□□□ 0.43
PRUNE1-210ENST00000475722 RRP12Q5JTH9 1297 aaKnown RBP17.74■□□□□ 0.43
PRUNE1-210ENST00000475722 CHADLQ6NUI6 762 aa17.74■□□□□ 0.43
PRUNE1-210ENST00000475722 NCOA7Q8NI08 942 aa17.74■□□□□ 0.43
PRUNE1-210ENST00000475722 NKX2-3Q8TAU0 364 aa17.74■□□□□ 0.43
PRUNE1-210ENST00000475722 CDCA5Q96FF9 252 aa17.74■□□□□ 0.43
PRUNE1-210ENST00000475722 NEK1Q96PY6 1258 aa17.74■□□□□ 0.43
PRUNE1-210ENST00000475722 KRT23Q9C075 422 aa17.74■□□□□ 0.43
PRUNE1-210ENST00000475722 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.74■□□□□ 0.43
PRUNE1-210ENST00000475722 TOMM22Q9NS69 142 aa17.74■□□□□ 0.43
PRUNE1-210ENST00000475722 B4E1Z4 1266 aa17.73■□□□□ 0.43
PRUNE1-210ENST00000475722 RASA1P20936 1047 aa17.73■□□□□ 0.43
PRUNE1-210ENST00000475722 PSMA5P28066 241 aa17.73■□□□□ 0.43
PRUNE1-210ENST00000475722 COL9A3Q14050 684 aaPredicted RBP17.73■□□□□ 0.43
PRUNE1-210ENST00000475722 TATDN1Q6P1N9 297 aa17.73■□□□□ 0.43
PRUNE1-210ENST00000475722 RALYLQ86SE5 291 aaKnown RBP17.73■□□□□ 0.43
PRUNE1-210ENST00000475722 TM6SF1Q9BZW5 370 aa17.73■□□□□ 0.43
PRUNE1-210ENST00000475722 SSC5DA1L4H1 1573 aa17.72■□□□□ 0.43
PRUNE1-210ENST00000475722 RANBP6O60518 1105 aaKnown RBP17.72■□□□□ 0.43
PRUNE1-210ENST00000475722 DCAF15Q66K64 600 aa17.72■□□□□ 0.43
PRUNE1-210ENST00000475722 MB21D2Q8IYB1 491 aaPredicted RBP17.72■□□□□ 0.43
PRUNE1-210ENST00000475722 ZNF444Q8N0Y2 327 aaPredicted RBP17.72■□□□□ 0.43
PRUNE1-210ENST00000475722 ZNF784Q8NCA9 323 aaPredicted RBP17.72■□□□□ 0.43
PRUNE1-210ENST00000475722 ESR2Q92731 530 aa17.72■□□□□ 0.43
PRUNE1-210ENST00000475722 ZSWIM6Q9HCJ5 1215 aa17.72■□□□□ 0.43
PRUNE1-210ENST00000475722 TRAF5O00463 557 aa17.71■□□□□ 0.43
PRUNE1-210ENST00000475722 KDM4AO75164 1064 aa17.71■□□□□ 0.43
PRUNE1-210ENST00000475722 HMGB1P09429 215 aaKnown RBP17.71■□□□□ 0.43
PRUNE1-210ENST00000475722 CASTP20810 708 aaKnown RBP17.71■□□□□ 0.43
PRUNE1-210ENST00000475722 NT5C2P49902 561 aa17.71■□□□□ 0.43
PRUNE1-210ENST00000475722 RRP1BQ14684 758 aaKnown RBP17.71■□□□□ 0.43
PRUNE1-210ENST00000475722 CERKLQ49MI3 558 aaPredicted RBP17.71■□□□□ 0.43
PRUNE1-210ENST00000475722 FAM47AQ5JRC9 791 aa17.71■□□□□ 0.43
PRUNE1-210ENST00000475722 ZNF341Q9BYN7 854 aa17.71■□□□□ 0.43
PRUNE1-210ENST00000475722 PHF20L1A8MW92 1017 aa17.7■□□□□ 0.42
PRUNE1-210ENST00000475722 ITGBL1O95965 494 aaPredicted RBP17.7■□□□□ 0.42
PRUNE1-210ENST00000475722 CPA1P15085 419 aa17.7■□□□□ 0.42
PRUNE1-210ENST00000475722 NF2P35240 595 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms