RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 DEFB118Q96PH6 123 aa19.43■□□□□ 0.7
CDPF1-206ENST00000475605 ZBTB7BO15156 539 aaPredicted RBP19.42■□□□□ 0.7
CDPF1-206ENST00000475605 TFRCP02786 760 aaKnown RBP19.42■□□□□ 0.7
CDPF1-206ENST00000475605 GNAI3P08754 354 aa19.42■□□□□ 0.7
CDPF1-206ENST00000475605 PRO3102Q9H379 93 aa19.42■□□□□ 0.7
CDPF1-206ENST00000475605 RAI14Q9P0K7 980 aa19.42■□□□□ 0.7
CDPF1-206ENST00000475605 TNNQ9UQP3 1299 aa19.42■□□□□ 0.7
CDPF1-206ENST00000475605 SZT2Q5T011 3432 aa19.42■□□□□ 0.7
CDPF1-206ENST00000475605 NPM3O75607 178 aaKnown RBP19.41■□□□□ 0.7
CDPF1-206ENST00000475605 GORABQ5T7V8 394 aa19.41■□□□□ 0.7
CDPF1-206ENST00000475605 OSBPL5Q9H0X9 879 aaPredicted RBP19.41■□□□□ 0.7
CDPF1-206ENST00000475605 NR2E3Q9Y5X4 410 aa19.41■□□□□ 0.7
CDPF1-206ENST00000475605 PNMA6EA0A0J9YXQ4 647 aa19.4■□□□□ 0.7
CDPF1-206ENST00000475605 LDHCP07864 332 aa19.4■□□□□ 0.7
CDPF1-206ENST00000475605 MCAMP43121 646 aa19.4■□□□□ 0.7
CDPF1-206ENST00000475605 HMGCS2P54868 508 aa19.4■□□□□ 0.7
CDPF1-206ENST00000475605 PROCA1Q8NCQ7 364 aaPredicted RBP19.4■□□□□ 0.7
CDPF1-206ENST00000475605 ZNF280CQ8ND82 737 aa19.4■□□□□ 0.7
CDPF1-206ENST00000475605 ARHGAP45Q92619 1136 aa19.4■□□□□ 0.7
CDPF1-206ENST00000475605 COA7Q96BR5 231 aa19.4■□□□□ 0.7
CDPF1-206ENST00000475605 PAK6Q9NQU5 681 aaPredicted RBP19.4■□□□□ 0.7
CDPF1-206ENST00000475605 ATAD5Q96QE3 1844 aa19.39■□□□□ 0.7
CDPF1-206ENST00000475605 ARID4AP29374 1257 aaPredicted RBP19.39■□□□□ 0.69
CDPF1-206ENST00000475605 CAP2P40123 477 aa19.39■□□□□ 0.69
CDPF1-206ENST00000475605 GSTO1P78417 241 aa19.39■□□□□ 0.69
CDPF1-206ENST00000475605 FAM110CQ1W6H9 321 aa19.39■□□□□ 0.69
CDPF1-206ENST00000475605 TEX11Q8IYF3 940 aa19.39■□□□□ 0.69
CDPF1-206ENST00000475605 SH3RF3Q8TEJ3 882 aaPredicted RBP19.39■□□□□ 0.69
CDPF1-206ENST00000475605 PNMA3Q9UL41 463 aa19.39■□□□□ 0.69
CDPF1-206ENST00000475605 LOC285556D6RIA3 1793 aa19.39■□□□□ 0.69
CDPF1-206ENST00000475605 EVI5O60447 810 aa19.38■□□□□ 0.69
CDPF1-206ENST00000475605 PAWRQ96IZ0 340 aaKnown RBP19.38■□□□□ 0.69
CDPF1-206ENST00000475605 CRISPLD2Q9H0B8 497 aa19.38■□□□□ 0.69
CDPF1-206ENST00000475605 COL2A1P02458 1487 aaPredicted RBP19.37■□□□□ 0.69
CDPF1-206ENST00000475605 JAG1P78504 1218 aa19.37■□□□□ 0.69
CDPF1-206ENST00000475605 TRIM32Q13049 653 aa19.37■□□□□ 0.69
CDPF1-206ENST00000475605 G3BP1Q13283 466 aaKnown RBP eCLIP19.37■□□□□ 0.69
CDPF1-206ENST00000475605 DIS3LQ8TF46 1054 aaKnown RBP19.37■□□□□ 0.69
CDPF1-206ENST00000475605 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.37■□□□□ 0.69
CDPF1-206ENST00000475605 ASCC2Q9H1I8 757 aaPredicted RBP19.37■□□□□ 0.69
CDPF1-206ENST00000475605 SNRKQ9NRH2 765 aa19.37■□□□□ 0.69
CDPF1-206ENST00000475605 LRP2BPQ9P2M1 347 aa19.37■□□□□ 0.69
CDPF1-206ENST00000475605 GJD2Q9UKL4 321 aa19.37■□□□□ 0.69
CDPF1-206ENST00000475605 USP17L5A8MUK1 530 aa19.36■□□□□ 0.69
CDPF1-206ENST00000475605 PEX10O60683 326 aa19.36■□□□□ 0.69
CDPF1-206ENST00000475605 MAP4K4O95819 1239 aaPredicted RBP19.36■□□□□ 0.69
CDPF1-206ENST00000475605 GNAI2P04899 355 aa19.36■□□□□ 0.69
CDPF1-206ENST00000475605 TRIM27P14373 513 aa19.36■□□□□ 0.69
CDPF1-206ENST00000475605 GCLCP48506 637 aaPredicted RBP19.36■□□□□ 0.69
CDPF1-206ENST00000475605 SH3D19Q5HYK7 790 aa19.36■□□□□ 0.69
CDPF1-206ENST00000475605 SIPA1L1O43166 1804 aa19.36■□□□□ 0.69
CDPF1-206ENST00000475605 RANBP2P49792 3224 aaKnown RBP19.36■□□□□ 0.69
CDPF1-206ENST00000475605 ALPK3Q96L96 1907 aa19.35■□□□□ 0.69
CDPF1-206ENST00000475605 ZBED9Q6R2W3 1325 aa19.35■□□□□ 0.69
CDPF1-206ENST00000475605 SHROOM1Q2M3G4 852 aaPredicted RBP19.35■□□□□ 0.69
CDPF1-206ENST00000475605 CLUAP1Q96AJ1 413 aa19.35■□□□□ 0.69
CDPF1-206ENST00000475605 AATFQ9NY61 560 aaKnown RBP eCLIP19.35■□□□□ 0.69
CDPF1-206ENST00000475605 STAP2Q9UGK3 403 aa19.35■□□□□ 0.69
CDPF1-206ENST00000475605 SOX1O00570 391 aaPredicted RBP19.34■□□□□ 0.69
CDPF1-206ENST00000475605 BCAR3O75815 825 aa19.34■□□□□ 0.69
CDPF1-206ENST00000475605 UQCRFS1P1P0C7P4 283 aa19.34■□□□□ 0.69
CDPF1-206ENST00000475605 PABPC4Q13310 644 aaKnown RBP eCLIP19.34■□□□□ 0.69
CDPF1-206ENST00000475605 MTMR2Q13614 643 aa19.34■□□□□ 0.69
CDPF1-206ENST00000475605 ADGRA1Q86SQ6 560 aa19.34■□□□□ 0.69
CDPF1-206ENST00000475605 MAPKAPK5Q8IW41 473 aa19.34■□□□□ 0.69
CDPF1-206ENST00000475605 FRAT1Q92837 279 aaPredicted RBP19.34■□□□□ 0.69
CDPF1-206ENST00000475605 TBC1D2Q9BYX2 928 aa19.34■□□□□ 0.69
CDPF1-206ENST00000475605 DNAJC18Q9H819 358 aa19.34■□□□□ 0.69
CDPF1-206ENST00000475605 PI4KBQ9UBF8 816 aa19.34■□□□□ 0.69
CDPF1-206ENST00000475605 HERC5Q9UII4 1024 aaKnown RBP19.34■□□□□ 0.69
CDPF1-206ENST00000475605 PLXNB2O15031 1838 aa19.33■□□□□ 0.69
CDPF1-206ENST00000475605 HMGCRP04035 888 aa19.33■□□□□ 0.68
CDPF1-206ENST00000475605 TGFBRAP1Q8WUH2 860 aa19.33■□□□□ 0.68
CDPF1-206ENST00000475605 P2RX7Q99572 595 aaKnown RBP19.33■□□□□ 0.68
CDPF1-206ENST00000475605 AS3MTQ9HBK9 375 aa19.33■□□□□ 0.68
CDPF1-206ENST00000475605 CAPN2P17655 700 aa19.32■□□□□ 0.68
CDPF1-206ENST00000475605 TTC39AQ5SRH9 613 aa19.32■□□□□ 0.68
CDPF1-206ENST00000475605 NAA16Q6N069 864 aaPredicted RBP19.32■□□□□ 0.68
CDPF1-206ENST00000475605 ATF7IPQ6VMQ6 1270 aa19.32■□□□□ 0.68
CDPF1-206ENST00000475605 NECAB2Q7Z6G3 386 aa19.32■□□□□ 0.68
CDPF1-206ENST00000475605 DBNDD2Q9BQY9 259 aa19.32■□□□□ 0.68
CDPF1-206ENST00000475605 NOL10Q9BSC4 688 aaKnown RBP19.32■□□□□ 0.68
CDPF1-206ENST00000475605 WDR18Q9BV38 432 aa19.32■□□□□ 0.68
CDPF1-206ENST00000475605 MORF4L1Q9UBU8 362 aa19.32■□□□□ 0.68
CDPF1-206ENST00000475605 RPTORQ8N122 1335 aa19.31■□□□□ 0.68
CDPF1-206ENST00000475605 IPO8O15397 1037 aaKnown RBP19.31■□□□□ 0.68
CDPF1-206ENST00000475605 GDF11O95390 407 aa19.31■□□□□ 0.68
CDPF1-206ENST00000475605 CYP2E1P05181 493 aaPredicted RBP19.31■□□□□ 0.68
CDPF1-206ENST00000475605 CYP2B6P20813 491 aa19.31■□□□□ 0.68
CDPF1-206ENST00000475605 BACE1P56817 501 aa19.31■□□□□ 0.68
CDPF1-206ENST00000475605 TNNI3KQ59H18 835 aa19.31■□□□□ 0.68
CDPF1-206ENST00000475605 TRIB2Q92519 343 aa19.31■□□□□ 0.68
CDPF1-206ENST00000475605 LRCH3Q96II8 777 aa19.31■□□□□ 0.68
CDPF1-206ENST00000475605 DHX36Q9H2U1 1008 aaKnown RBP19.31■□□□□ 0.68
CDPF1-206ENST00000475605 TXNRD2Q9NNW7 524 aa19.31■□□□□ 0.68
CDPF1-206ENST00000475605 HMX1Q9NP08 348 aaPredicted RBP19.31■□□□□ 0.68
CDPF1-206ENST00000475605 PALD1Q9ULE6 856 aa19.31■□□□□ 0.68
CDPF1-206ENST00000475605 FPGT-TNNI3KV9GXZ4 949 aa19.31■□□□□ 0.68
CDPF1-206ENST00000475605 CDK5RAP2Q96SN8 1893 aa19.31■□□□□ 0.68
CDPF1-206ENST00000475605 FLT1P17948 1338 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms