RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 CHD4Q14839 1912 aa24.45■■□□□ 1.5
SH3D21-202ENST00000474766 BECN2A8MW95 431 aa24.44■■□□□ 1.5
SH3D21-202ENST00000474766 C21orf2O43822 256 aa24.44■■□□□ 1.5
SH3D21-202ENST00000474766 FDPSP14324 419 aaKnown RBP24.44■■□□□ 1.5
SH3D21-202ENST00000474766 C11orf57Q6ZUT1 292 aaPredicted RBP24.44■■□□□ 1.5
SH3D21-202ENST00000474766 CRAMP1Q96RY5 1269 aa24.44■■□□□ 1.5
SH3D21-202ENST00000474766 ALDH1B1P30837 517 aa24.44■■□□□ 1.5
SH3D21-202ENST00000474766 C7orf43Q8WVR3 580 aa24.44■■□□□ 1.5
SH3D21-202ENST00000474766 GPHNQ9NQX3 736 aaPredicted RBP24.44■■□□□ 1.5
SH3D21-202ENST00000474766 FER1L6Q2WGJ9 1857 aa24.43■■□□□ 1.5
SH3D21-202ENST00000474766 PRC1O43663 620 aa24.43■■□□□ 1.5
SH3D21-202ENST00000474766 ARID4AP29374 1257 aaPredicted RBP24.43■■□□□ 1.5
SH3D21-202ENST00000474766 UBE3CQ15386 1083 aa24.43■■□□□ 1.5
SH3D21-202ENST00000474766 CCDC152Q4G0S7 254 aa24.43■■□□□ 1.5
SH3D21-202ENST00000474766 OLFM4Q6UX06 510 aa24.43■■□□□ 1.5
SH3D21-202ENST00000474766 NCOA7Q8NI08 942 aa24.43■■□□□ 1.5
SH3D21-202ENST00000474766 SEC31BQ9NQW1 1179 aa24.43■■□□□ 1.5
SH3D21-202ENST00000474766 ANTXR2P58335 489 aa24.42■■□□□ 1.5
SH3D21-202ENST00000474766 ARID5BQ14865 1188 aa24.42■■□□□ 1.5
SH3D21-202ENST00000474766 DHX40Q8IX18 779 aaKnown RBP24.42■■□□□ 1.5
SH3D21-202ENST00000474766 NAP1L2Q9ULW6 460 aaPredicted RBP24.42■■□□□ 1.5
SH3D21-202ENST00000474766 TULP2O00295 520 aa24.42■■□□□ 1.5
SH3D21-202ENST00000474766 ZNF213O14771 459 aa24.42■■□□□ 1.5
SH3D21-202ENST00000474766 IRX5P78411 483 aaPredicted RBP24.42■■□□□ 1.5
SH3D21-202ENST00000474766 ZNF396Q96N95 335 aaPredicted RBP24.42■■□□□ 1.5
SH3D21-202ENST00000474766 NAT10Q9H0A0 1025 aaKnown RBP24.42■■□□□ 1.5
SH3D21-202ENST00000474766 ZNF446Q9NWS9 450 aa24.42■■□□□ 1.5
SH3D21-202ENST00000474766 HPS5Q9UPZ3 1129 aa24.42■■□□□ 1.5
SH3D21-202ENST00000474766 FGFR2P21802 821 aa24.41■■□□□ 1.5
SH3D21-202ENST00000474766 CYP2C19P33261 490 aa24.41■■□□□ 1.5
SH3D21-202ENST00000474766 SLC9C2Q5TAH2 1124 aa24.41■■□□□ 1.5
SH3D21-202ENST00000474766 ARHGAP27Q6ZUM4 889 aa24.41■■□□□ 1.5
SH3D21-202ENST00000474766 USP28Q96RU2 1077 aa24.41■■□□□ 1.5
SH3D21-202ENST00000474766 NOL10Q9BSC4 688 aaKnown RBP24.41■■□□□ 1.5
SH3D21-202ENST00000474766 TSPYL1Q9H0U9 437 aa24.41■■□□□ 1.5
SH3D21-202ENST00000474766 PIH1D3Q9NQM4 214 aaKnown RBP24.41■■□□□ 1.5
SH3D21-202ENST00000474766 RTL9Q8NET4 1388 aa24.41■■□□□ 1.5
SH3D21-202ENST00000474766 CCDC93Q567U6 631 aa24.4■■□□□ 1.5
SH3D21-202ENST00000474766 CCDC102BQ68D86 513 aa24.4■■□□□ 1.5
SH3D21-202ENST00000474766 CCDC150Q8NCX0 1101 aa24.4■■□□□ 1.5
SH3D21-202ENST00000474766 MROH5Q6ZUA9 1318 aa24.4■■□□□ 1.5
SH3D21-202ENST00000474766 DHX16O60231 1041 aaKnown RBP24.4■■□□□ 1.5
SH3D21-202ENST00000474766 UQCRFS1P1P0C7P4 283 aa24.4■■□□□ 1.5
SH3D21-202ENST00000474766 CDK11BP21127 795 aaKnown RBP24.4■■□□□ 1.5
SH3D21-202ENST00000474766 SNW1Q13573 536 aaKnown RBP24.4■■□□□ 1.5
SH3D21-202ENST00000474766 CEP57L1Q8IYX8 460 aa24.4■■□□□ 1.5
SH3D21-202ENST00000474766 NBPF3Q9H094 633 aa24.4■■□□□ 1.5
SH3D21-202ENST00000474766 FOSBP53539 338 aa24.39■■□□□ 1.5
SH3D21-202ENST00000474766 PUM3Q15397 648 aaKnown RBP24.39■■□□□ 1.5
SH3D21-202ENST00000474766 RALYLQ86SE5 291 aaKnown RBP24.39■■□□□ 1.5
SH3D21-202ENST00000474766 LPIN2Q92539 896 aa24.39■■□□□ 1.5
SH3D21-202ENST00000474766 SBF1O95248 1867 aa24.39■■□□□ 1.5
SH3D21-202ENST00000474766 ARAP2Q8WZ64 1704 aa24.39■■□□□ 1.49
SH3D21-202ENST00000474766 KLF18A0A0U1RQI7 1052 aa24.39■■□□□ 1.49
SH3D21-202ENST00000474766 PPEF1O14829 653 aaPredicted RBP24.39■■□□□ 1.49
SH3D21-202ENST00000474766 PHKA1P46020 1223 aa24.39■■□□□ 1.49
SH3D21-202ENST00000474766 CEBPZQ03701 1054 aaKnown RBP24.39■■□□□ 1.49
SH3D21-202ENST00000474766 GRAPQ13588 217 aa24.39■■□□□ 1.49
SH3D21-202ENST00000474766 CCDC73Q6ZRK6 1079 aa24.39■■□□□ 1.49
SH3D21-202ENST00000474766 FILIP1Q7Z7B0 1213 aa24.39■■□□□ 1.49
SH3D21-202ENST00000474766 GRAPLQ8TC17 118 aaPredicted RBP24.39■■□□□ 1.49
SH3D21-202ENST00000474766 CELF1Q92879 486 aaKnown RBP24.39■■□□□ 1.49
SH3D21-202ENST00000474766 FTOQ9C0B1 505 aaKnown RBP eCLIP24.39■■□□□ 1.49
SH3D21-202ENST00000474766 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.39■■□□□ 1.49
SH3D21-202ENST00000474766 V9GYY5 206 aaPredicted RBP24.39■■□□□ 1.49
SH3D21-202ENST00000474766 SNED1Q8TER0 1413 aa24.38■■□□□ 1.49
SH3D21-202ENST00000474766 CCAR1Q8IX12 1150 aaKnown RBP24.38■■□□□ 1.49
SH3D21-202ENST00000474766 TRMT1Q9NXH9 659 aaKnown RBP24.38■■□□□ 1.49
SH3D21-202ENST00000474766 MYO5AQ9Y4I1 1855 aaKnown RBP24.37■■□□□ 1.49
SH3D21-202ENST00000474766 TCRBV5S4A2TA0A5A2 114 aa24.37■■□□□ 1.49
SH3D21-202ENST00000474766 FHOD1Q9Y613 1164 aa24.37■■□□□ 1.49
SH3D21-202ENST00000474766 LRRC37AA6NMS7 1700 aa24.37■■□□□ 1.49
SH3D21-202ENST00000474766 CCDC88AQ3V6T2 1871 aa24.37■■□□□ 1.49
SH3D21-202ENST00000474766 NFKBIEO00221 500 aa24.37■■□□□ 1.49
SH3D21-202ENST00000474766 KINO60870 393 aaKnown RBP24.37■■□□□ 1.49
SH3D21-202ENST00000474766 PPFIA3O75145 1194 aa24.37■■□□□ 1.49
SH3D21-202ENST00000474766 RASSF7Q02833 373 aa24.37■■□□□ 1.49
SH3D21-202ENST00000474766 FAM160A1Q05DH4 1040 aa24.37■■□□□ 1.49
SH3D21-202ENST00000474766 RGS22Q8NE09 1264 aa24.37■■□□□ 1.49
SH3D21-202ENST00000474766 ZNF532Q9HCE3 1301 aa24.36■■□□□ 1.49
SH3D21-202ENST00000474766 GOLGA8BA8MQT2 603 aa24.36■■□□□ 1.49
SH3D21-202ENST00000474766 CCP110O43303 1012 aa24.36■■□□□ 1.49
SH3D21-202ENST00000474766 NRDCO43847 1150 aa24.36■■□□□ 1.49
SH3D21-202ENST00000474766 PDE6AP16499 860 aa24.36■■□□□ 1.49
SH3D21-202ENST00000474766 GUCY1B3Q02153 619 aa24.36■■□□□ 1.49
SH3D21-202ENST00000474766 ENGASEQ8NFI3 743 aa24.36■■□□□ 1.49
SH3D21-202ENST00000474766 BPIFA3Q9BQP9 254 aa24.36■■□□□ 1.49
SH3D21-202ENST00000474766 ATP8B1O43520 1251 aa24.35■■□□□ 1.49
SH3D21-202ENST00000474766 IDH1O75874 414 aaKnown RBP24.35■■□□□ 1.49
SH3D21-202ENST00000474766 GOLPH3LQ9H4A5 285 aa24.35■■□□□ 1.49
SH3D21-202ENST00000474766 RTEL1Q9NZ71 1219 aa24.35■■□□□ 1.49
SH3D21-202ENST00000474766 E4F1Q66K89 784 aaPredicted RBP24.35■■□□□ 1.49
SH3D21-202ENST00000474766 FBXO18Q8NFZ0 1043 aa24.35■■□□□ 1.49
SH3D21-202ENST00000474766 PPP1R13BQ96KQ4 1090 aa24.35■■□□□ 1.49
SH3D21-202ENST00000474766 ARGLU1Q9NWB6 273 aaPredicted RBP24.35■■□□□ 1.49
SH3D21-202ENST00000474766 BBOX1O75936 387 aa24.34■■□□□ 1.49
SH3D21-202ENST00000474766 PRELPP51888 382 aa24.34■■□□□ 1.49
SH3D21-202ENST00000474766 ALX1Q15699 326 aa24.34■■□□□ 1.49
SH3D21-202ENST00000474766 NBPF11Q86T75 865 aa24.34■■□□□ 1.49
SH3D21-202ENST00000474766 TBC1D10CQ8IV04 446 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms