RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 COL6A3P12111 3177 aa17.29■□□□□ 0.36
CCDC78-209ENST00000474647 MYH8P13535 1937 aa17.28■□□□□ 0.36
CCDC78-209ENST00000474647 GPR75-ASB3A0A0A6YYF3 556 aa17.28■□□□□ 0.36
CCDC78-209ENST00000474647 ZBTB22O15209 634 aa17.28■□□□□ 0.36
CCDC78-209ENST00000474647 EVI5O60447 810 aa17.28■□□□□ 0.36
CCDC78-209ENST00000474647 GSTO1P78417 241 aa17.28■□□□□ 0.36
CCDC78-209ENST00000474647 IRF5Q13568 498 aa17.28■□□□□ 0.36
CCDC78-209ENST00000474647 TBC1D9Q6ZT07 1266 aa17.28■□□□□ 0.36
CCDC78-209ENST00000474647 PXYLP1Q8TE99 480 aa17.28■□□□□ 0.36
CCDC78-209ENST00000474647 ZNF384Q8TF68 577 aa17.28■□□□□ 0.36
CCDC78-209ENST00000474647 RAI14Q9P0K7 980 aa17.28■□□□□ 0.36
CCDC78-209ENST00000474647 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.28■□□□□ 0.36
CCDC78-209ENST00000474647 COL2A1P02458 1487 aaPredicted RBP17.28■□□□□ 0.36
CCDC78-209ENST00000474647 LAMA3Q16787 3333 aa17.28■□□□□ 0.36
CCDC78-209ENST00000474647 ZBTB7BO15156 539 aaPredicted RBP17.27■□□□□ 0.36
CCDC78-209ENST00000474647 GNAI3P08754 354 aa17.27■□□□□ 0.36
CCDC78-209ENST00000474647 HMGCS2P54868 508 aa17.27■□□□□ 0.36
CCDC78-209ENST00000474647 SPP2Q13103 211 aa17.27■□□□□ 0.36
CCDC78-209ENST00000474647 FAM110CQ1W6H9 321 aa17.27■□□□□ 0.36
CCDC78-209ENST00000474647 TRMT2AQ8IZ69 625 aaKnown RBP17.27■□□□□ 0.36
CCDC78-209ENST00000474647 SPATA5Q8NB90 893 aa17.27■□□□□ 0.36
CCDC78-209ENST00000474647 PROCA1Q8NCQ7 364 aaPredicted RBP17.27■□□□□ 0.36
CCDC78-209ENST00000474647 OSBPL5Q9H0X9 879 aaPredicted RBP17.27■□□□□ 0.36
CCDC78-209ENST00000474647 HMG20BQ9P0W2 317 aa17.27■□□□□ 0.36
CCDC78-209ENST00000474647 TBC1D12O60347 775 aa17.26■□□□□ 0.35
CCDC78-209ENST00000474647 LDHCP07864 332 aa17.26■□□□□ 0.35
CCDC78-209ENST00000474647 TEX11Q8IYF3 940 aa17.26■□□□□ 0.35
CCDC78-209ENST00000474647 ZNF280CQ8ND82 737 aa17.26■□□□□ 0.35
CCDC78-209ENST00000474647 NSUN4Q96CB9 384 aaKnown RBP17.26■□□□□ 0.35
CCDC78-209ENST00000474647 DNAH12Q6ZR08 3092 aa17.25■□□□□ 0.35
CCDC78-209ENST00000474647 PABPC4Q13310 644 aaKnown RBP eCLIP17.25■□□□□ 0.35
CCDC78-209ENST00000474647 NOL10Q9BSC4 688 aaKnown RBP17.25■□□□□ 0.35
CCDC78-209ENST00000474647 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.25■□□□□ 0.35
CCDC78-209ENST00000474647 PAK6Q9NQU5 681 aaPredicted RBP17.25■□□□□ 0.35
CCDC78-209ENST00000474647 NAV1Q8NEY1 1877 aa17.24■□□□□ 0.35
CCDC78-209ENST00000474647 NPM3O75607 178 aaKnown RBP17.24■□□□□ 0.35
CCDC78-209ENST00000474647 RARSP54136 660 aaKnown RBP17.24■□□□□ 0.35
CCDC78-209ENST00000474647 MTX1Q13505 466 aa17.24■□□□□ 0.35
CCDC78-209ENST00000474647 DIS3LQ8TF46 1054 aaKnown RBP17.24■□□□□ 0.35
CCDC78-209ENST00000474647 PAWRQ96IZ0 340 aaKnown RBP17.24■□□□□ 0.35
CCDC78-209ENST00000474647 PRO3102Q9H379 93 aa17.24■□□□□ 0.35
CCDC78-209ENST00000474647 LRP2BPQ9P2M1 347 aa17.24■□□□□ 0.35
CCDC78-209ENST00000474647 USP17L5A8MUK1 530 aa17.23■□□□□ 0.35
CCDC78-209ENST00000474647 HMGCRP04035 888 aa17.23■□□□□ 0.35
CCDC78-209ENST00000474647 ARID4AP29374 1257 aaPredicted RBP17.23■□□□□ 0.35
CCDC78-209ENST00000474647 CAP2P40123 477 aa17.23■□□□□ 0.35
CCDC78-209ENST00000474647 MCAMP43121 646 aa17.23■□□□□ 0.35
CCDC78-209ENST00000474647 GCLCP48506 637 aaPredicted RBP17.23■□□□□ 0.35
CCDC78-209ENST00000474647 SH3RF3Q8TEJ3 882 aaPredicted RBP17.23■□□□□ 0.35
CCDC78-209ENST00000474647 TBC1D2Q9BYX2 928 aa17.23■□□□□ 0.35
CCDC78-209ENST00000474647 ASCC2Q9H1I8 757 aaPredicted RBP17.23■□□□□ 0.35
CCDC78-209ENST00000474647 AS3MTQ9HBK9 375 aa17.23■□□□□ 0.35
CCDC78-209ENST00000474647 MAP4K4O95819 1239 aaPredicted RBP17.22■□□□□ 0.35
CCDC78-209ENST00000474647 G3BP1Q13283 466 aaKnown RBP eCLIP17.22■□□□□ 0.35
CCDC78-209ENST00000474647 MTMR2Q13614 643 aa17.22■□□□□ 0.35
CCDC78-209ENST00000474647 RRP1BQ14684 758 aaKnown RBP17.22■□□□□ 0.35
CCDC78-209ENST00000474647 NECAB2Q7Z6G3 386 aa17.22■□□□□ 0.35
CCDC78-209ENST00000474647 CRISPLD2Q9H0B8 497 aa17.22■□□□□ 0.35
CCDC78-209ENST00000474647 AATFQ9NY61 560 aaKnown RBP eCLIP17.22■□□□□ 0.35
CCDC78-209ENST00000474647 HERC5Q9UII4 1024 aaKnown RBP17.22■□□□□ 0.35
CCDC78-209ENST00000474647 GNAI2P04899 355 aa17.21■□□□□ 0.35
CCDC78-209ENST00000474647 CAPN2P17655 700 aa17.21■□□□□ 0.35
CCDC78-209ENST00000474647 IRX3P78415 501 aaPredicted RBP17.21■□□□□ 0.35
CCDC78-209ENST00000474647 DIEXFQ68CQ4 756 aaKnown RBP17.21■□□□□ 0.35
CCDC78-209ENST00000474647 C7orf61Q8IZ16 206 aa17.21■□□□□ 0.35
CCDC78-209ENST00000474647 ARHGAP45Q92619 1136 aa17.21■□□□□ 0.35
CCDC78-209ENST00000474647 FRAT1Q92837 279 aaPredicted RBP17.21■□□□□ 0.35
CCDC78-209ENST00000474647 SNRKQ9NRH2 765 aa17.21■□□□□ 0.35
CCDC78-209ENST00000474647 STAP2Q9UGK3 403 aa17.21■□□□□ 0.35
CCDC78-209ENST00000474647 PNMA6EA0A0J9YXQ4 647 aa17.2■□□□□ 0.34
CCDC78-209ENST00000474647 UQCRFS1P1P0C7P4 283 aa17.2■□□□□ 0.34
CCDC78-209ENST00000474647 TRIM32Q13049 653 aa17.2■□□□□ 0.34
CCDC78-209ENST00000474647 TTC39AQ5SRH9 613 aa17.2■□□□□ 0.34
CCDC78-209ENST00000474647 NAA16Q6N069 864 aaPredicted RBP17.2■□□□□ 0.34
CCDC78-209ENST00000474647 MAPKAPK5Q8IW41 473 aa17.2■□□□□ 0.34
CCDC78-209ENST00000474647 CRACR2BQ8N4Y2 399 aaPredicted RBP17.2■□□□□ 0.34
CCDC78-209ENST00000474647 TRIM34Q9BYJ4 488 aa17.2■□□□□ 0.34
CCDC78-209ENST00000474647 HMX1Q9NP08 348 aaPredicted RBP17.2■□□□□ 0.34
CCDC78-209ENST00000474647 TMOD4Q9NZQ9 345 aa17.2■□□□□ 0.34
CCDC78-209ENST00000474647 PI4KBQ9UBF8 816 aa17.2■□□□□ 0.34
CCDC78-209ENST00000474647 TNNQ9UQP3 1299 aa17.2■□□□□ 0.34
CCDC78-209ENST00000474647 A0A1W2PPC1 479 aa17.19■□□□□ 0.34
CCDC78-209ENST00000474647 SOX1O00570 391 aaPredicted RBP17.19■□□□□ 0.34
CCDC78-209ENST00000474647 BAG3O95817 575 aa17.19■□□□□ 0.34
CCDC78-209ENST00000474647 TRIM27P14373 513 aa17.19■□□□□ 0.34
CCDC78-209ENST00000474647 SH3D19Q5HYK7 790 aa17.19■□□□□ 0.34
CCDC78-209ENST00000474647 TGFBRAP1Q8WUH2 860 aa17.19■□□□□ 0.34
CCDC78-209ENST00000474647 CLUAP1Q96AJ1 413 aa17.19■□□□□ 0.34
CCDC78-209ENST00000474647 RPTORQ8N122 1335 aa17.19■□□□□ 0.34
CCDC78-209ENST00000474647 PEX10O60683 326 aa17.18■□□□□ 0.34
CCDC78-209ENST00000474647 GDF11O95390 407 aa17.18■□□□□ 0.34
CCDC78-209ENST00000474647 ASNSP08243 561 aa17.18■□□□□ 0.34
CCDC78-209ENST00000474647 CYP2B6P20813 491 aa17.18■□□□□ 0.34
CCDC78-209ENST00000474647 OS9Q13438 667 aaPredicted RBP17.18■□□□□ 0.34
CCDC78-209ENST00000474647 ANKLE1Q8NAG6 615 aa17.18■□□□□ 0.34
CCDC78-209ENST00000474647 TRIB2Q92519 343 aa17.18■□□□□ 0.34
CCDC78-209ENST00000474647 LRCH3Q96II8 777 aa17.18■□□□□ 0.34
CCDC78-209ENST00000474647 DHX36Q9H2U1 1008 aaKnown RBP17.18■□□□□ 0.34
CCDC78-209ENST00000474647 ZMYND8Q9ULU4 1186 aaPredicted RBP17.18■□□□□ 0.34
CCDC78-209ENST00000474647 FLT1P17948 1338 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms