RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 MYL10Q9BUA6 226 aa11.41□□□□□ -0.58
USP39-214ENST00000474572 GOLPH3LQ9H4A5 285 aa11.41□□□□□ -0.58
USP39-214ENST00000474572 GJB4Q9NTQ9 266 aa11.41□□□□□ -0.58
USP39-214ENST00000474572 FAM237AA0A1B0GTK4 181 aa11.4□□□□□ -0.58
USP39-214ENST00000474572 MINDY4BA8MYZ0 360 aa11.4□□□□□ -0.58
USP39-214ENST00000474572 SMIM22K7EJ46 135 aa11.4□□□□□ -0.58
USP39-214ENST00000474572 NPHP1O15259 732 aa11.4□□□□□ -0.58
USP39-214ENST00000474572 BBOX1O75936 387 aa11.4□□□□□ -0.58
USP39-214ENST00000474572 TRIM37O94972 964 aa11.4□□□□□ -0.58
USP39-214ENST00000474572 GPSM2P81274 684 aa11.4□□□□□ -0.58
USP39-214ENST00000474572 FAM160A1Q05DH4 1040 aa11.4□□□□□ -0.58
USP39-214ENST00000474572 CHAF1AQ13111 956 aaPredicted RBP11.4□□□□□ -0.58
USP39-214ENST00000474572 ANO1Q5XXA6 986 aa11.4□□□□□ -0.58
USP39-214ENST00000474572 SLC51AQ86UW1 340 aa11.4□□□□□ -0.58
USP39-214ENST00000474572 ZSCAN30Q86W11 494 aa11.4□□□□□ -0.58
USP39-214ENST00000474572 CERS3Q8IU89 383 aa11.4□□□□□ -0.58
USP39-214ENST00000474572 FMR1NBQ8N0W7 255 aaPredicted RBP11.4□□□□□ -0.58
USP39-214ENST00000474572 CRACR2BQ8N4Y2 399 aaPredicted RBP11.4□□□□□ -0.58
USP39-214ENST00000474572 FAM200AQ8TCP9 573 aa11.4□□□□□ -0.58
USP39-214ENST00000474572 MRPS27Q92552 414 aaKnown RBP11.4□□□□□ -0.58
USP39-214ENST00000474572 AKT1S1Q96B36 256 aa11.4□□□□□ -0.58
USP39-214ENST00000474572 ZSCAN10Q96SZ4 725 aaPredicted RBP11.4□□□□□ -0.58
USP39-214ENST00000474572 UBAC1Q9BSL1 405 aa11.4□□□□□ -0.58
USP39-214ENST00000474572 RNF26Q9BY78 433 aaPredicted RBP11.4□□□□□ -0.58
USP39-214ENST00000474572 RTN4Q9NQC3 1192 aaKnown RBP11.4□□□□□ -0.58
USP39-214ENST00000474572 PCDHA7Q9UN72 937 aa11.4□□□□□ -0.58
USP39-214ENST00000474572 CLIC4Q9Y696 253 aa11.4□□□□□ -0.58
USP39-214ENST00000474572 MORC2Q9Y6X9 1032 aaPredicted RBP11.4□□□□□ -0.58
USP39-214ENST00000474572 ZNF646O15015 1829 aaPredicted RBP11.39□□□□□ -0.59
USP39-214ENST00000474572 USP17L12C9JPN9 530 aa11.39□□□□□ -0.59
USP39-214ENST00000474572 USP17L21D6R901 530 aa11.39□□□□□ -0.59
USP39-214ENST00000474572 SPTLC2O15270 562 aa11.39□□□□□ -0.59
USP39-214ENST00000474572 PPP6R2O75170 966 aa11.39□□□□□ -0.59
USP39-214ENST00000474572 DDAH1O94760 285 aa11.39□□□□□ -0.59
USP39-214ENST00000474572 DEXIO95424 95 aa11.39□□□□□ -0.59
USP39-214ENST00000474572 CAVIN2O95810 425 aa11.39□□□□□ -0.59
USP39-214ENST00000474572 GSTO1P78417 241 aa11.39□□□□□ -0.59
USP39-214ENST00000474572 CEBPZQ03701 1054 aaKnown RBP11.39□□□□□ -0.59
USP39-214ENST00000474572 FUT2Q10981 343 aa11.39□□□□□ -0.59
USP39-214ENST00000474572 SLC39A14Q15043 492 aa11.39□□□□□ -0.59
USP39-214ENST00000474572 PTPAQ15257 358 aa11.39□□□□□ -0.59
USP39-214ENST00000474572 CCDC73Q6ZRK6 1079 aa11.39□□□□□ -0.59
USP39-214ENST00000474572 DZIP1Q86YF9 867 aaKnown RBP11.39□□□□□ -0.59
USP39-214ENST00000474572 ENAHQ8N8S7 591 aaPredicted RBP11.39□□□□□ -0.59
USP39-214ENST00000474572 FANCBQ8NB91 859 aa11.39□□□□□ -0.59
USP39-214ENST00000474572 ZKSCAN3Q9BRR0 538 aa11.39□□□□□ -0.59
USP39-214ENST00000474572 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.39□□□□□ -0.59
USP39-214ENST00000474572 SLC26A6Q9BXS9 759 aa11.39□□□□□ -0.59
USP39-214ENST00000474572 CD209Q9NNX6 404 aa11.39□□□□□ -0.59
USP39-214ENST00000474572 RBM28Q9NW13 759 aaKnown RBP11.39□□□□□ -0.59
USP39-214ENST00000474572 AATFQ9NY61 560 aaKnown RBP eCLIP11.39□□□□□ -0.59
USP39-214ENST00000474572 ANKIB1Q9P2G1 1089 aa11.39□□□□□ -0.59
USP39-214ENST00000474572 NOL7Q9UMY1 257 aaKnown RBP11.39□□□□□ -0.59
USP39-214ENST00000474572 MROH7-TTC4A0A0A0MT08 1334 aa11.38□□□□□ -0.59
USP39-214ENST00000474572 CYP2D7A0A087X1C5 515 aa11.38□□□□□ -0.59
USP39-214ENST00000474572 MMP1P03956 469 aa11.38□□□□□ -0.59
USP39-214ENST00000474572 POLR3DP05423 398 aaPredicted RBP11.38□□□□□ -0.59
USP39-214ENST00000474572 LDHBP07195 334 aaKnown RBP11.38□□□□□ -0.59
USP39-214ENST00000474572 LDHCP07864 332 aa11.38□□□□□ -0.59
USP39-214ENST00000474572 CALM1P0DP23 149 aa11.38□□□□□ -0.59
USP39-214ENST00000474572 CALM2P0DP24 149 aa11.38□□□□□ -0.59
USP39-214ENST00000474572 CALM3P0DP25 149 aa11.38□□□□□ -0.59
USP39-214ENST00000474572 RBM6P78332 1123 aaKnown RBP11.38□□□□□ -0.59
USP39-214ENST00000474572 TROAPQ12815 778 aa11.38□□□□□ -0.59
USP39-214ENST00000474572 STK38Q15208 465 aa11.38□□□□□ -0.59
USP39-214ENST00000474572 CAMK4Q16566 473 aa11.38□□□□□ -0.59
USP39-214ENST00000474572 TPRNQ4KMQ1 711 aa11.38□□□□□ -0.59
USP39-214ENST00000474572 AXDND1Q5T1B0 1012 aaPredicted RBP11.38□□□□□ -0.59
USP39-214ENST00000474572 IQCA1Q86XH1 822 aa11.38□□□□□ -0.59
USP39-214ENST00000474572 CCDC144CPQ8IYA2 1237 aa11.38□□□□□ -0.59
USP39-214ENST00000474572 TRIM22Q8IYM9 498 aa11.38□□□□□ -0.59
USP39-214ENST00000474572 FSIP1Q8NA03 581 aa11.38□□□□□ -0.59
USP39-214ENST00000474572 FAM163AQ96GL9 167 aaPredicted RBP11.38□□□□□ -0.59
USP39-214ENST00000474572 MAP3K14Q99558 947 aa11.38□□□□□ -0.59
USP39-214ENST00000474572 RTFDC1Q9BY42 306 aaPredicted RBP11.38□□□□□ -0.59
USP39-214ENST00000474572 TOMM22Q9NS69 142 aa11.38□□□□□ -0.59
USP39-214ENST00000474572 CCDC39Q9UFE4 941 aa11.38□□□□□ -0.59
USP39-214ENST00000474572 FAM205AQ6ZU69 1335 aa11.37□□□□□ -0.59
USP39-214ENST00000474572 MYH1P12882 1939 aa11.37□□□□□ -0.59
USP39-214ENST00000474572 UFL1O94874 794 aa11.37□□□□□ -0.59
USP39-214ENST00000474572 SLC3A2P08195 630 aaKnown RBP11.37□□□□□ -0.59
USP39-214ENST00000474572 GUCY1A2P33402 732 aa11.37□□□□□ -0.59
USP39-214ENST00000474572 ME1P48163 572 aa11.37□□□□□ -0.59
USP39-214ENST00000474572 TRIM29Q14134 588 aa11.37□□□□□ -0.59
USP39-214ENST00000474572 GRIK5Q16478 980 aa11.37□□□□□ -0.59
USP39-214ENST00000474572 ZNF827Q17R98 1081 aa11.37□□□□□ -0.59
USP39-214ENST00000474572 C12orf60Q5U649 245 aa11.37□□□□□ -0.59
USP39-214ENST00000474572 SP8Q8IXZ3 490 aa11.37□□□□□ -0.59
USP39-214ENST00000474572 ANKS1AQ92625 1134 aa11.37□□□□□ -0.59
USP39-214ENST00000474572 FOXP1Q9H334 677 aaPredicted RBP11.37□□□□□ -0.59
USP39-214ENST00000474572 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.37□□□□□ -0.59
USP39-214ENST00000474572 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.37□□□□□ -0.59
USP39-214ENST00000474572 USP25Q9UHP3 1055 aa11.37□□□□□ -0.59
USP39-214ENST00000474572 GGA1Q9UJY5 639 aa11.37□□□□□ -0.59
USP39-214ENST00000474572 HPSEQ9Y251 543 aa11.37□□□□□ -0.59
USP39-214ENST00000474572 GAKO14976 1311 aa11.36□□□□□ -0.59
USP39-214ENST00000474572 UBE2Q2LH0YL09 131 aa11.36□□□□□ -0.59
USP39-214ENST00000474572 AP5Z1O43299 807 aa11.36□□□□□ -0.59
USP39-214ENST00000474572 PRPF3O43395 683 aaKnown RBP11.36□□□□□ -0.59
USP39-214ENST00000474572 CMA1P23946 247 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms