RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 SLURP2P0DP57 97 aa14.24□□□□□ -0.13
EXOSC1-207ENST00000474309 TFCP2Q12800 502 aa14.24□□□□□ -0.13
EXOSC1-207ENST00000474309 SPP2Q13103 211 aa14.24□□□□□ -0.13
EXOSC1-207ENST00000474309 SH3D19Q5HYK7 790 aa14.24□□□□□ -0.13
EXOSC1-207ENST00000474309 ANKLE1Q8NAG6 615 aa14.24□□□□□ -0.13
EXOSC1-207ENST00000474309 ZNF280CQ8ND82 737 aa14.24□□□□□ -0.13
EXOSC1-207ENST00000474309 ZNF384Q8TF68 577 aa14.24□□□□□ -0.13
EXOSC1-207ENST00000474309 NSUN4Q96CB9 384 aaKnown RBP14.24□□□□□ -0.13
EXOSC1-207ENST00000474309 DEFB118Q96PH6 123 aa14.24□□□□□ -0.13
EXOSC1-207ENST00000474309 MEIS3Q99687 375 aa14.24□□□□□ -0.13
EXOSC1-207ENST00000474309 RANBP2P49792 3224 aaKnown RBP14.24□□□□□ -0.13
EXOSC1-207ENST00000474309 USP17L5A8MUK1 530 aa14.23□□□□□ -0.13
EXOSC1-207ENST00000474309 SRGAP3O43295 1099 aa14.23□□□□□ -0.13
EXOSC1-207ENST00000474309 CAP2P40123 477 aa14.23□□□□□ -0.13
EXOSC1-207ENST00000474309 TREML2Q5T2D2 321 aa14.23□□□□□ -0.13
EXOSC1-207ENST00000474309 HMG20BQ9P0W2 317 aa14.23□□□□□ -0.13
EXOSC1-207ENST00000474309 GJD2Q9UKL4 321 aa14.23□□□□□ -0.13
EXOSC1-207ENST00000474309 COL2A1P02458 1487 aaPredicted RBP14.23□□□□□ -0.13
EXOSC1-207ENST00000474309 ARID4AP29374 1257 aaPredicted RBP14.22□□□□□ -0.13
EXOSC1-207ENST00000474309 NECAB2Q7Z6G3 386 aa14.22□□□□□ -0.13
EXOSC1-207ENST00000474309 SPATA5Q8NB90 893 aa14.22□□□□□ -0.13
EXOSC1-207ENST00000474309 NEUROD6Q96NK8 337 aa14.22□□□□□ -0.13
EXOSC1-207ENST00000474309 AS3MTQ9HBK9 375 aa14.22□□□□□ -0.13
EXOSC1-207ENST00000474309 HERC5Q9UII4 1024 aaKnown RBP14.22□□□□□ -0.13
EXOSC1-207ENST00000474309 RPTORQ8N122 1335 aa14.21□□□□□ -0.13
EXOSC1-207ENST00000474309 IGSF3O75054 1194 aa14.21□□□□□ -0.13
EXOSC1-207ENST00000474309 HMGCRP04035 888 aa14.21□□□□□ -0.13
EXOSC1-207ENST00000474309 RARSP54136 660 aaKnown RBP14.21□□□□□ -0.13
EXOSC1-207ENST00000474309 GORABQ5T7V8 394 aa14.21□□□□□ -0.13
EXOSC1-207ENST00000474309 CCDC84Q86UT8 332 aaPredicted RBP14.21□□□□□ -0.13
EXOSC1-207ENST00000474309 PAWRQ96IZ0 340 aaKnown RBP14.21□□□□□ -0.13
EXOSC1-207ENST00000474309 WDR18Q9BV38 432 aa14.21□□□□□ -0.13
EXOSC1-207ENST00000474309 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.21□□□□□ -0.13
EXOSC1-207ENST00000474309 DHX36Q9H2U1 1008 aaKnown RBP14.21□□□□□ -0.13
EXOSC1-207ENST00000474309 GINM1Q9NU53 330 aa14.21□□□□□ -0.13
EXOSC1-207ENST00000474309 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.21□□□□□ -0.13
EXOSC1-207ENST00000474309 PI4KBQ9UBF8 816 aa14.21□□□□□ -0.13
EXOSC1-207ENST00000474309 UQCRFS1P1P0C7P4 283 aa14.2□□□□□ -0.14
EXOSC1-207ENST00000474309 HOXA7P31268 230 aaPredicted RBP14.2□□□□□ -0.14
EXOSC1-207ENST00000474309 BMP8BP34820 402 aa14.2□□□□□ -0.14
EXOSC1-207ENST00000474309 HMGCS2P54868 508 aa14.2□□□□□ -0.14
EXOSC1-207ENST00000474309 FOXP4Q8IVH2 680 aaPredicted RBP14.2□□□□□ -0.14
EXOSC1-207ENST00000474309 ASCC2Q9H1I8 757 aaPredicted RBP14.2□□□□□ -0.14
EXOSC1-207ENST00000474309 HMX1Q9NP08 348 aaPredicted RBP14.2□□□□□ -0.14
EXOSC1-207ENST00000474309 RAI14Q9P0K7 980 aa14.2□□□□□ -0.14
EXOSC1-207ENST00000474309 MORF4L1Q9UBU8 362 aa14.2□□□□□ -0.14
EXOSC1-207ENST00000474309 TAOK2Q9UL54 1235 aa14.2□□□□□ -0.14
EXOSC1-207ENST00000474309 FAM196BA6NMK8 535 aa14.19□□□□□ -0.14
EXOSC1-207ENST00000474309 C19orf81C9J6K1 198 aa14.19□□□□□ -0.14
EXOSC1-207ENST00000474309 IPO8O15397 1037 aaKnown RBP14.19□□□□□ -0.14
EXOSC1-207ENST00000474309 PLCG2P16885 1265 aa14.19□□□□□ -0.14
EXOSC1-207ENST00000474309 PPP4CP60510 307 aa14.19□□□□□ -0.14
EXOSC1-207ENST00000474309 G3BP1Q13283 466 aaKnown RBP eCLIP14.19□□□□□ -0.14
EXOSC1-207ENST00000474309 RRP1BQ14684 758 aaKnown RBP14.19□□□□□ -0.14
EXOSC1-207ENST00000474309 GPR153Q6NV75 609 aa14.19□□□□□ -0.14
EXOSC1-207ENST00000474309 TBC1D9Q6ZT07 1266 aa14.19□□□□□ -0.14
EXOSC1-207ENST00000474309 METTL16Q86W50 562 aaKnown RBP14.19□□□□□ -0.14
EXOSC1-207ENST00000474309 TEX11Q8IYF3 940 aa14.19□□□□□ -0.14
EXOSC1-207ENST00000474309 LRP2BPQ9P2M1 347 aa14.19□□□□□ -0.14
EXOSC1-207ENST00000474309 STAP2Q9UGK3 403 aa14.19□□□□□ -0.14
EXOSC1-207ENST00000474309 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.19□□□□□ -0.14
EXOSC1-207ENST00000474309 BAG3O95817 575 aa14.18□□□□□ -0.14
EXOSC1-207ENST00000474309 ASNSP08243 561 aa14.18□□□□□ -0.14
EXOSC1-207ENST00000474309 XRCC5P13010 732 aaKnown RBP14.18□□□□□ -0.14
EXOSC1-207ENST00000474309 MCAMP43121 646 aa14.18□□□□□ -0.14
EXOSC1-207ENST00000474309 BACE1P56817 501 aa14.18□□□□□ -0.14
EXOSC1-207ENST00000474309 GDF15Q99988 308 aa14.18□□□□□ -0.14
EXOSC1-207ENST00000474309 NOL10Q9BSC4 688 aaKnown RBP14.18□□□□□ -0.14
EXOSC1-207ENST00000474309 NBPF3Q9H094 633 aa14.18□□□□□ -0.14
EXOSC1-207ENST00000474309 GPR108Q9NPR9 543 aa14.18□□□□□ -0.14
EXOSC1-207ENST00000474309 ALPK3Q96L96 1907 aa14.17□□□□□ -0.14
EXOSC1-207ENST00000474309 LOC285556D6RIA3 1793 aa14.17□□□□□ -0.14
EXOSC1-207ENST00000474309 GNAI2P04899 355 aa14.17□□□□□ -0.14
EXOSC1-207ENST00000474309 PI16Q6UXB8 463 aa14.17□□□□□ -0.14
EXOSC1-207ENST00000474309 TRMT44Q8IYL2 757 aaKnown RBP14.17□□□□□ -0.14
EXOSC1-207ENST00000474309 TMOD4Q9NZQ9 345 aa14.17□□□□□ -0.14
EXOSC1-207ENST00000474309 OGDHLQ9ULD0 1010 aa14.17□□□□□ -0.14
EXOSC1-207ENST00000474309 ATAD5Q96QE3 1844 aa14.17□□□□□ -0.14
EXOSC1-207ENST00000474309 USP17L10C9JJH3 530 aa14.16□□□□□ -0.14
EXOSC1-207ENST00000474309 MNX1P50219 401 aaPredicted RBP14.16□□□□□ -0.14
EXOSC1-207ENST00000474309 IRX3P78415 501 aaPredicted RBP14.16□□□□□ -0.14
EXOSC1-207ENST00000474309 MAP3K21Q5TCX8 1036 aa14.16□□□□□ -0.14
EXOSC1-207ENST00000474309 NAA16Q6N069 864 aaPredicted RBP14.16□□□□□ -0.14
EXOSC1-207ENST00000474309 SLC17A8Q8NDX2 589 aa14.16□□□□□ -0.14
EXOSC1-207ENST00000474309 GPRC5AQ8NFJ5 357 aa14.16□□□□□ -0.14
EXOSC1-207ENST00000474309 SH3RF3Q8TEJ3 882 aaPredicted RBP14.16□□□□□ -0.14
EXOSC1-207ENST00000474309 DIS3LQ8TF46 1054 aaKnown RBP14.16□□□□□ -0.14
EXOSC1-207ENST00000474309 GTF3C2Q8WUA4 911 aaPredicted RBP14.16□□□□□ -0.14
EXOSC1-207ENST00000474309 P2RX7Q99572 595 aaKnown RBP14.16□□□□□ -0.14
EXOSC1-207ENST00000474309 NUDT12Q9BQG2 462 aa14.16□□□□□ -0.14
EXOSC1-207ENST00000474309 SOX1O00570 391 aaPredicted RBP14.15□□□□□ -0.14
EXOSC1-207ENST00000474309 MAPK4P31152 587 aa14.15□□□□□ -0.14
EXOSC1-207ENST00000474309 CCDC158Q5M9N0 1113 aa14.15□□□□□ -0.14
EXOSC1-207ENST00000474309 TRIB2Q92519 343 aa14.15□□□□□ -0.14
EXOSC1-207ENST00000474309 ZNF512BQ96KM6 892 aaPredicted RBP14.15□□□□□ -0.14
EXOSC1-207ENST00000474309 C11orf49Q9H6J7 331 aa14.15□□□□□ -0.14
EXOSC1-207ENST00000474309 PLXNB2O15031 1838 aa14.14□□□□□ -0.15
EXOSC1-207ENST00000474309 PNMA6EA0A0J9YXQ4 647 aa14.14□□□□□ -0.15
EXOSC1-207ENST00000474309 CYP2B6P20813 491 aa14.14□□□□□ -0.15
EXOSC1-207ENST00000474309 HERVK_113P62684 666 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms