RNA–Protein interactions for RNA: ENST00000474195.1

LRRFIP1-210, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 2

Gene LRRFIP1, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-210ENST00000474195 EIF5BO60841 1220 aaKnown RBP17.24■□□□□ 0.35
LRRFIP1-210ENST00000474195 SBK1Q52WX2 424 aa17.24■□□□□ 0.35
LRRFIP1-210ENST00000474195 FAM83AQ86UY5 434 aa17.24■□□□□ 0.35
LRRFIP1-210ENST00000474195 DYNLL2Q96FJ2 89 aa17.24■□□□□ 0.35
LRRFIP1-210ENST00000474195 FAM196BA6NMK8 535 aa17.24■□□□□ 0.35
LRRFIP1-210ENST00000474195 ADM5C9JUS6 153 aa17.24■□□□□ 0.35
LRRFIP1-210ENST00000474195 STOX1Q6ZVD7 989 aa17.24■□□□□ 0.35
LRRFIP1-210ENST00000474195 APOBEC3FQ8IUX4 373 aaKnown RBP17.24■□□□□ 0.35
LRRFIP1-210ENST00000474195 SLC44A5Q8NCS7 719 aa17.24■□□□□ 0.35
LRRFIP1-210ENST00000474195 NKX2-3Q8TAU0 364 aa17.24■□□□□ 0.35
LRRFIP1-210ENST00000474195 TEPSINQ96N21 525 aa17.24■□□□□ 0.35
LRRFIP1-210ENST00000474195 PGAP2Q9UHJ9 254 aa17.24■□□□□ 0.35
LRRFIP1-210ENST00000474195 SNX14Q9Y5W7 946 aa17.24■□□□□ 0.35
LRRFIP1-210ENST00000474195 ATRNL1Q5VV63 1379 aa17.23■□□□□ 0.35
LRRFIP1-210ENST00000474195 TNFAIP1Q13829 316 aa17.23■□□□□ 0.35
LRRFIP1-210ENST00000474195 DCPSQ96C86 337 aaKnown RBP17.23■□□□□ 0.35
LRRFIP1-210ENST00000474195 CSRNP1Q96S65 589 aa17.23■□□□□ 0.35
LRRFIP1-210ENST00000474195 CIZ1Q9ULV3 898 aaPredicted RBP17.23■□□□□ 0.35
LRRFIP1-210ENST00000474195 CLEC11AQ9Y240 323 aa17.23■□□□□ 0.35
LRRFIP1-210ENST00000474195 PITPNM2Q9BZ72 1349 aa17.23■□□□□ 0.35
LRRFIP1-210ENST00000474195 TNNI2P48788 182 aa17.22■□□□□ 0.35
LRRFIP1-210ENST00000474195 ADCK5Q3MIX3 580 aa17.22■□□□□ 0.35
LRRFIP1-210ENST00000474195 KCNB2Q92953 911 aa17.22■□□□□ 0.35
LRRFIP1-210ENST00000474195 ANAPC4Q9UJX5 808 aa17.22■□□□□ 0.35
LRRFIP1-210ENST00000474195 COL2A1P02458 1487 aaPredicted RBP17.22■□□□□ 0.35
LRRFIP1-210ENST00000474195 RNF20Q5VTR2 975 aa17.22■□□□□ 0.35
LRRFIP1-210ENST00000474195 MAP1SQ66K74 1059 aaPredicted RBP17.22■□□□□ 0.35
LRRFIP1-210ENST00000474195 KRT26Q7Z3Y9 468 aa17.22■□□□□ 0.35
LRRFIP1-210ENST00000474195 ZC3H15Q8WU90 426 aaKnown RBP17.22■□□□□ 0.35
LRRFIP1-210ENST00000474195 DHX36Q9H2U1 1008 aaKnown RBP17.22■□□□□ 0.35
LRRFIP1-210ENST00000474195 E7EWF7 191 aa17.21■□□□□ 0.35
LRRFIP1-210ENST00000474195 PRDM1O75626 825 aa17.21■□□□□ 0.35
LRRFIP1-210ENST00000474195 MCCP23508 829 aa17.21■□□□□ 0.35
LRRFIP1-210ENST00000474195 NBPF12Q5TAG4 269 aaPredicted RBP17.21■□□□□ 0.35
LRRFIP1-210ENST00000474195 TTC6Q86TZ1 520 aa17.21■□□□□ 0.35
LRRFIP1-210ENST00000474195 AMOTL1Q8IY63 956 aa17.21■□□□□ 0.35
LRRFIP1-210ENST00000474195 DNAJC18Q9H819 358 aa17.21■□□□□ 0.35
LRRFIP1-210ENST00000474195 GPBP1L1Q9HC44 474 aaPredicted RBP17.21■□□□□ 0.35
LRRFIP1-210ENST00000474195 NEDD4P46934 1319 aa17.21■□□□□ 0.35
LRRFIP1-210ENST00000474195 MYH8P13535 1937 aa17.21■□□□□ 0.34
LRRFIP1-210ENST00000474195 CD2BP2O95400 341 aaKnown RBP17.2■□□□□ 0.34
LRRFIP1-210ENST00000474195 USP48Q86UV5 1035 aa17.2■□□□□ 0.34
LRRFIP1-210ENST00000474195 SULF1Q8IWU6 871 aa17.2■□□□□ 0.34
LRRFIP1-210ENST00000474195 GLIS2Q9BZE0 524 aaPredicted RBP17.2■□□□□ 0.34
LRRFIP1-210ENST00000474195 PI4KBQ9UBF8 816 aa17.2■□□□□ 0.34
LRRFIP1-210ENST00000474195 ROBO3Q96MS0 1386 aa17.2■□□□□ 0.34
LRRFIP1-210ENST00000474195 HLA-DOAP06340 250 aa17.2■□□□□ 0.34
LRRFIP1-210ENST00000474195 ZKSCAN1P17029 563 aaPredicted RBP17.2■□□□□ 0.34
LRRFIP1-210ENST00000474195 GABPAQ06546 454 aa17.2■□□□□ 0.34
LRRFIP1-210ENST00000474195 AKNAD1Q5T1N1 836 aa17.2■□□□□ 0.34
LRRFIP1-210ENST00000474195 MIGA2Q7L4E1 593 aa17.2■□□□□ 0.34
LRRFIP1-210ENST00000474195 SERPINB13Q9UIV8 391 aa17.2■□□□□ 0.34
LRRFIP1-210ENST00000474195 CPA1P15085 419 aa17.19■□□□□ 0.34
LRRFIP1-210ENST00000474195 FZD1Q9UP38 647 aa17.19■□□□□ 0.34
LRRFIP1-210ENST00000474195 SSC5DA1L4H1 1573 aa17.19■□□□□ 0.34
LRRFIP1-210ENST00000474195 FSD2A1L4K1 749 aa17.19■□□□□ 0.34
LRRFIP1-210ENST00000474195 FMR1Q06787 632 aaKnown RBP eCLIP17.19■□□□□ 0.34
LRRFIP1-210ENST00000474195 TSGA10IPQ3SY00 556 aa17.19■□□□□ 0.34
LRRFIP1-210ENST00000474195 RRP12Q5JTH9 1297 aaKnown RBP17.19■□□□□ 0.34
LRRFIP1-210ENST00000474195 C16orf86Q6ZW13 317 aa17.19■□□□□ 0.34
LRRFIP1-210ENST00000474195 CRACR2BQ8N4Y2 399 aaPredicted RBP17.19■□□□□ 0.34
LRRFIP1-210ENST00000474195 STAG1Q8WVM7 1258 aa17.19■□□□□ 0.34
LRRFIP1-210ENST00000474195 K7ELQ4 463 aaPredicted RBP17.18■□□□□ 0.34
LRRFIP1-210ENST00000474195 TRAF5O00463 557 aa17.18■□□□□ 0.34
LRRFIP1-210ENST00000474195 YY1P25490 414 aa17.18■□□□□ 0.34
LRRFIP1-210ENST00000474195 CDK8P49336 464 aa17.18■□□□□ 0.34
LRRFIP1-210ENST00000474195 MFSD6Q6ZSS7 791 aa17.18■□□□□ 0.34
LRRFIP1-210ENST00000474195 LDHDQ86WU2 507 aa17.18■□□□□ 0.34
LRRFIP1-210ENST00000474195 JAKMIP1Q96N16 626 aaKnown RBP17.18■□□□□ 0.34
LRRFIP1-210ENST00000474195 EHD4Q9H223 541 aa17.18■□□□□ 0.34
LRRFIP1-210ENST00000474195 TOMM22Q9NS69 142 aa17.18■□□□□ 0.34
LRRFIP1-210ENST00000474195 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.18■□□□□ 0.34
LRRFIP1-210ENST00000474195 B4E1Z4 1266 aa17.17■□□□□ 0.34
LRRFIP1-210ENST00000474195 SHMT1P34896 483 aa17.17■□□□□ 0.34
LRRFIP1-210ENST00000474195 RAB3GAP1Q15042 981 aa17.17■□□□□ 0.34
LRRFIP1-210ENST00000474195 UPF3BQ9BZI7 483 aaKnown RBP17.17■□□□□ 0.34
LRRFIP1-210ENST00000474195 SLC3A2P08195 630 aaKnown RBP17.17■□□□□ 0.34
LRRFIP1-210ENST00000474195 FGRP09769 529 aa17.17■□□□□ 0.34
LRRFIP1-210ENST00000474195 ANAPC15P60006 121 aa17.17■□□□□ 0.34
LRRFIP1-210ENST00000474195 SHROOM1Q2M3G4 852 aaPredicted RBP17.17■□□□□ 0.34
LRRFIP1-210ENST00000474195 CDC37L1Q7L3B6 337 aa17.17■□□□□ 0.34
LRRFIP1-210ENST00000474195 METTL16Q86W50 562 aaKnown RBP17.17■□□□□ 0.34
LRRFIP1-210ENST00000474195 PPP2R3BQ9Y5P8 575 aa17.17■□□□□ 0.34
LRRFIP1-210ENST00000474195 DDX11L8A8MPP1 907 aa17.16■□□□□ 0.34
LRRFIP1-210ENST00000474195 KIF3CO14782 793 aa17.16■□□□□ 0.34
LRRFIP1-210ENST00000474195 TRAK2O60296 914 aa17.16■□□□□ 0.34
LRRFIP1-210ENST00000474195 PDE4BQ07343 736 aa17.16■□□□□ 0.34
LRRFIP1-210ENST00000474195 RRP1BQ14684 758 aaKnown RBP17.16■□□□□ 0.34
LRRFIP1-210ENST00000474195 L1TD1Q5T7N2 865 aaKnown RBP17.16■□□□□ 0.34
LRRFIP1-210ENST00000474195 CHST3Q7LGC8 479 aa17.16■□□□□ 0.34
LRRFIP1-210ENST00000474195 FOXP4Q8IVH2 680 aaPredicted RBP17.16■□□□□ 0.34
LRRFIP1-210ENST00000474195 CDCA5Q96FF9 252 aa17.16■□□□□ 0.34
LRRFIP1-210ENST00000474195 TCEANC2Q96MN5 208 aa17.16■□□□□ 0.34
LRRFIP1-210ENST00000474195 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.16■□□□□ 0.34
LRRFIP1-210ENST00000474195 KDM4AO75164 1064 aa17.15■□□□□ 0.34
LRRFIP1-210ENST00000474195 CASTP20810 708 aaKnown RBP17.15■□□□□ 0.34
LRRFIP1-210ENST00000474195 RASA1P20936 1047 aa17.15■□□□□ 0.34
LRRFIP1-210ENST00000474195 FAM47AQ5JRC9 791 aa17.15■□□□□ 0.34
LRRFIP1-210ENST00000474195 TNPO1Q92973 898 aaKnown RBP17.15■□□□□ 0.34
LRRFIP1-210ENST00000474195 IL17RAQ96F46 866 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms