RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 USP5P45974 858 aa12.4□□□□□ -0.42
CASC3-204ENST00000474190 TNFAIP1Q13829 316 aa12.4□□□□□ -0.42
CASC3-204ENST00000474190 NECTIN1Q15223 517 aa12.4□□□□□ -0.42
CASC3-204ENST00000474190 MAP3K11Q16584 847 aa12.4□□□□□ -0.42
CASC3-204ENST00000474190 TBC1D10CQ8IV04 446 aa12.4□□□□□ -0.42
CASC3-204ENST00000474190 RUFY2Q8WXA3 655 aa12.4□□□□□ -0.42
CASC3-204ENST00000474190 KCNB2Q92953 911 aa12.4□□□□□ -0.42
CASC3-204ENST00000474190 CSRNP1Q96S65 589 aa12.4□□□□□ -0.42
CASC3-204ENST00000474190 NOL10Q9BSC4 688 aaKnown RBP12.4□□□□□ -0.42
CASC3-204ENST00000474190 EHD4Q9H223 541 aa12.4□□□□□ -0.42
CASC3-204ENST00000474190 TMOD2Q9NZR1 351 aa12.4□□□□□ -0.42
CASC3-204ENST00000474190 ANAPC4Q9UJX5 808 aa12.4□□□□□ -0.42
CASC3-204ENST00000474190 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.4□□□□□ -0.42
CASC3-204ENST00000474190 CYP21A2P08686 494 aa12.39□□□□□ -0.43
CASC3-204ENST00000474190 LDLRAD1Q5T700 205 aa12.39□□□□□ -0.43
CASC3-204ENST00000474190 TATDN1Q6P1N9 297 aa12.39□□□□□ -0.43
CASC3-204ENST00000474190 STOX1Q6ZVD7 989 aa12.39□□□□□ -0.43
CASC3-204ENST00000474190 MIGA2Q7L4E1 593 aa12.39□□□□□ -0.43
CASC3-204ENST00000474190 RASEFQ8IZ41 740 aa12.39□□□□□ -0.43
CASC3-204ENST00000474190 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.39□□□□□ -0.43
CASC3-204ENST00000474190 USP26Q9BXU7 913 aa12.39□□□□□ -0.43
CASC3-204ENST00000474190 DHX36Q9H2U1 1008 aaKnown RBP12.39□□□□□ -0.43
CASC3-204ENST00000474190 CDK5RAP2Q96SN8 1893 aa12.39□□□□□ -0.43
CASC3-204ENST00000474190 GUCY1A2P33402 732 aa12.38□□□□□ -0.43
CASC3-204ENST00000474190 TNNI2P48788 182 aa12.38□□□□□ -0.43
CASC3-204ENST00000474190 CTDSPL2Q05D32 466 aa12.38□□□□□ -0.43
CASC3-204ENST00000474190 PPARAQ07869 468 aa12.38□□□□□ -0.43
CASC3-204ENST00000474190 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.38□□□□□ -0.43
CASC3-204ENST00000474190 C16orf86Q6ZW13 317 aa12.38□□□□□ -0.43
CASC3-204ENST00000474190 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.38□□□□□ -0.43
CASC3-204ENST00000474190 PI4KBQ9UBF8 816 aa12.38□□□□□ -0.43
CASC3-204ENST00000474190 ARPP21Q9UBL0 812 aaPredicted RBP12.38□□□□□ -0.43
CASC3-204ENST00000474190 RBM8AQ9Y5S9 174 aaKnown RBP12.38□□□□□ -0.43
CASC3-204ENST00000474190 FOCADQ5VW36 1801 aa12.38□□□□□ -0.43
CASC3-204ENST00000474190 ECM29Q5VYK3 1845 aa12.38□□□□□ -0.43
CASC3-204ENST00000474190 CELF2O95319 508 aaKnown RBP12.37□□□□□ -0.43
CASC3-204ENST00000474190 INPP5BP32019 993 aa12.37□□□□□ -0.43
CASC3-204ENST00000474190 CDK8P49336 464 aa12.37□□□□□ -0.43
CASC3-204ENST00000474190 HAND2P61296 217 aa12.37□□□□□ -0.43
CASC3-204ENST00000474190 FOXP4Q8IVH2 680 aaPredicted RBP12.37□□□□□ -0.43
CASC3-204ENST00000474190 IL17RAQ96F46 866 aa12.37□□□□□ -0.43
CASC3-204ENST00000474190 NAPBQ9H115 298 aa12.37□□□□□ -0.43
CASC3-204ENST00000474190 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.37□□□□□ -0.43
CASC3-204ENST00000474190 PAPPA2Q9BXP8 1791 aa12.37□□□□□ -0.43
CASC3-204ENST00000474190 POLR2AP24928 1970 aaKnown RBP12.36□□□□□ -0.43
CASC3-204ENST00000474190 SLC27A2O14975 620 aa12.36□□□□□ -0.43
CASC3-204ENST00000474190 APPP05067 770 aa12.36□□□□□ -0.43
CASC3-204ENST00000474190 POLR3DP05423 398 aaPredicted RBP12.36□□□□□ -0.43
CASC3-204ENST00000474190 RASA1P20936 1047 aa12.36□□□□□ -0.43
CASC3-204ENST00000474190 TDO2P48775 406 aa12.36□□□□□ -0.43
CASC3-204ENST00000474190 MFAP1P55081 439 aaKnown RBP12.36□□□□□ -0.43
CASC3-204ENST00000474190 CREB3L3Q68CJ9 461 aa12.36□□□□□ -0.43
CASC3-204ENST00000474190 TTC6Q86TZ1 520 aa12.36□□□□□ -0.43
CASC3-204ENST00000474190 SIAH1Q8IUQ4 282 aa12.36□□□□□ -0.43
CASC3-204ENST00000474190 BACH2Q9BYV9 841 aa12.36□□□□□ -0.43
CASC3-204ENST00000474190 ANO2Q9NQ90 1003 aa12.36□□□□□ -0.43
CASC3-204ENST00000474190 PRDM10Q9NQV6 1147 aa12.36□□□□□ -0.43
CASC3-204ENST00000474190 CREBZFQ9NS37 354 aa12.36□□□□□ -0.43
CASC3-204ENST00000474190 HERC5Q9UII4 1024 aaKnown RBP12.36□□□□□ -0.43
CASC3-204ENST00000474190 SERPINB13Q9UIV8 391 aa12.36□□□□□ -0.43
CASC3-204ENST00000474190 U3KPZ7 1027 aaPredicted RBP12.36□□□□□ -0.43
CASC3-204ENST00000474190 NEDD4P46934 1319 aa12.36□□□□□ -0.43
CASC3-204ENST00000474190 IGKV6D-41A0A0C4DH26 115 aa12.35□□□□□ -0.43
CASC3-204ENST00000474190 MINDY4BA8MYZ0 360 aa12.35□□□□□ -0.43
CASC3-204ENST00000474190 EPB41L2O43491 1005 aaKnown RBP12.35□□□□□ -0.43
CASC3-204ENST00000474190 HSPA4P34932 840 aa12.35□□□□□ -0.43
CASC3-204ENST00000474190 GJA5P36382 358 aa12.35□□□□□ -0.43
CASC3-204ENST00000474190 TSGA10IPQ3SY00 556 aa12.35□□□□□ -0.43
CASC3-204ENST00000474190 SUPT20HL1Q3ZLR7 823 aa12.35□□□□□ -0.43
CASC3-204ENST00000474190 SAPCD2Q86UD0 394 aa12.35□□□□□ -0.43
CASC3-204ENST00000474190 ZSCAN29Q8IWY8 852 aaPredicted RBP12.35□□□□□ -0.43
CASC3-204ENST00000474190 STAG1Q8WVM7 1258 aa12.35□□□□□ -0.43
CASC3-204ENST00000474190 CLMNQ96JQ2 1002 aa12.35□□□□□ -0.43
CASC3-204ENST00000474190 NACAP1Q9BZK3 213 aa12.35□□□□□ -0.43
CASC3-204ENST00000474190 GBA2Q9HCG7 927 aaPredicted RBP12.35□□□□□ -0.43
CASC3-204ENST00000474190 PCDH10Q9P2E7 1040 aa12.35□□□□□ -0.43
CASC3-204ENST00000474190 SNCAIPQ9Y6H5 919 aa12.35□□□□□ -0.43
CASC3-204ENST00000474190 UBE2Q2LH0YL09 131 aa12.34□□□□□ -0.43
CASC3-204ENST00000474190 ORC4O43929 436 aa12.34□□□□□ -0.43
CASC3-204ENST00000474190 PRDM1O75626 825 aa12.34□□□□□ -0.43
CASC3-204ENST00000474190 AKR1B1P15121 316 aa12.34□□□□□ -0.43
CASC3-204ENST00000474190 NOVP48745 357 aa12.34□□□□□ -0.43
CASC3-204ENST00000474190 PRKG1Q13976 671 aa12.34□□□□□ -0.43
CASC3-204ENST00000474190 VGLL4Q14135 290 aa12.34□□□□□ -0.43
CASC3-204ENST00000474190 ADCK5Q3MIX3 580 aa12.34□□□□□ -0.43
CASC3-204ENST00000474190 NOL9Q5SY16 702 aaKnown RBP12.34□□□□□ -0.43
CASC3-204ENST00000474190 CNKSR2Q8WXI2 1034 aa12.34□□□□□ -0.43
CASC3-204ENST00000474190 ZKSCAN4Q969J2 545 aaPredicted RBP12.34□□□□□ -0.43
CASC3-204ENST00000474190 KIF2CQ99661 725 aa12.34□□□□□ -0.43
CASC3-204ENST00000474190 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.34□□□□□ -0.43
CASC3-204ENST00000474190 AK9Q5TCS8 1911 aa12.33□□□□□ -0.44
CASC3-204ENST00000474190 HLA-DOAP06340 250 aa12.33□□□□□ -0.44
CASC3-204ENST00000474190 CAP2P40123 477 aa12.33□□□□□ -0.44
CASC3-204ENST00000474190 ANTXR2P58335 489 aa12.33□□□□□ -0.44
CASC3-204ENST00000474190 FKBP1BP68106 108 aa12.33□□□□□ -0.44
CASC3-204ENST00000474190 AKNAD1Q5T1N1 836 aa12.33□□□□□ -0.44
CASC3-204ENST00000474190 CASC1Q6TDU7 716 aa12.33□□□□□ -0.44
CASC3-204ENST00000474190 CCDC84Q86UT8 332 aaPredicted RBP12.33□□□□□ -0.44
CASC3-204ENST00000474190 STK11IPQ8N1F8 1099 aa12.33□□□□□ -0.44
CASC3-204ENST00000474190 ABHD8Q96I13 439 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms