RNA–Protein interactions for RNA: ENST00000474172.1

SETX-204, Transcript of senataxin, humanhuman

TSL 3

Gene SETX, Length 719 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETX-204ENST00000474172 SUPT20HQ8NEM7 779 aa11.86□□□□□ -0.51
SETX-204ENST00000474172 SMARCC2Q8TAQ2 1214 aa11.86□□□□□ -0.51
SETX-204ENST00000474172 ZNF274Q96GC6 653 aaPredicted RBP11.86□□□□□ -0.51
SETX-204ENST00000474172 TOMM22Q9NS69 142 aa11.86□□□□□ -0.51
SETX-204ENST00000474172 USP40Q9NVE5 1235 aa11.86□□□□□ -0.51
SETX-204ENST00000474172 NAP1L2Q9ULW6 460 aaPredicted RBP11.86□□□□□ -0.51
SETX-204ENST00000474172 MTMR6Q9Y217 621 aa11.86□□□□□ -0.51
SETX-204ENST00000474172 SUGT1Q9Y2Z0 365 aa11.86□□□□□ -0.51
SETX-204ENST00000474172 CD2APQ9Y5K6 639 aa11.86□□□□□ -0.51
SETX-204ENST00000474172 IFIT3O14879 490 aaKnown RBP11.85□□□□□ -0.51
SETX-204ENST00000474172 ORC4O43929 436 aa11.85□□□□□ -0.51
SETX-204ENST00000474172 BAG3O95817 575 aa11.85□□□□□ -0.51
SETX-204ENST00000474172 ADD1P35611 737 aaKnown RBP11.85□□□□□ -0.51
SETX-204ENST00000474172 IARSP41252 1262 aaKnown RBP11.85□□□□□ -0.51
SETX-204ENST00000474172 FKBP1AP62942 108 aaKnown RBP11.85□□□□□ -0.51
SETX-204ENST00000474172 FGD1P98174 961 aa11.85□□□□□ -0.51
SETX-204ENST00000474172 TRDNQ13061 729 aa11.85□□□□□ -0.51
SETX-204ENST00000474172 FOXD4L6Q3SYB3 417 aaPredicted RBP11.85□□□□□ -0.51
SETX-204ENST00000474172 TMED8Q6PL24 325 aaPredicted RBP11.85□□□□□ -0.51
SETX-204ENST00000474172 HHIPL2Q6UWX4 724 aa11.85□□□□□ -0.51
SETX-204ENST00000474172 FOXD4L3Q6VB84 417 aaPredicted RBP11.85□□□□□ -0.51
SETX-204ENST00000474172 SH3BP5LQ7L8J4 393 aa11.85□□□□□ -0.51
SETX-204ENST00000474172 CCDC144CPQ8IYA2 1237 aa11.85□□□□□ -0.51
SETX-204ENST00000474172 LARGE2Q8N3Y3 721 aa11.85□□□□□ -0.51
SETX-204ENST00000474172 KRT23Q9C075 422 aa11.85□□□□□ -0.51
SETX-204ENST00000474172 IL17RBQ9NRM6 502 aa11.85□□□□□ -0.51
SETX-204ENST00000474172 GJB4Q9NTQ9 266 aa11.85□□□□□ -0.51
SETX-204ENST00000474172 ANGEL1Q9UNK9 670 aaKnown RBP11.85□□□□□ -0.51
SETX-204ENST00000474172 BCS1LQ9Y276 419 aa11.85□□□□□ -0.51
SETX-204ENST00000474172 GOLGA8BA8MQT2 603 aa11.84□□□□□ -0.51
SETX-204ENST00000474172 RANBP6O60518 1105 aaKnown RBP11.84□□□□□ -0.51
SETX-204ENST00000474172 IGSF3O75054 1194 aa11.84□□□□□ -0.51
SETX-204ENST00000474172 VIL1P09327 827 aaKnown RBP11.84□□□□□ -0.51
SETX-204ENST00000474172 NUCB2P80303 420 aa11.84□□□□□ -0.51
SETX-204ENST00000474172 CXCL9Q07325 125 aa11.84□□□□□ -0.51
SETX-204ENST00000474172 PICALMQ13492 652 aa11.84□□□□□ -0.51
SETX-204ENST00000474172 RCSD1Q6JBY9 416 aa11.84□□□□□ -0.51
SETX-204ENST00000474172 APOA5Q6Q788 366 aa11.84□□□□□ -0.51
SETX-204ENST00000474172 CLEC17AQ6ZS10 378 aa11.84□□□□□ -0.51
SETX-204ENST00000474172 ENAHQ8N8S7 591 aaPredicted RBP11.84□□□□□ -0.51
SETX-204ENST00000474172 TMEM87BQ96K49 555 aa11.84□□□□□ -0.51
SETX-204ENST00000474172 PRMT6Q96LA8 375 aaPredicted RBP11.84□□□□□ -0.51
SETX-204ENST00000474172 ZDHHC15Q96MV8 337 aa11.84□□□□□ -0.51
SETX-204ENST00000474172 FAM198AQ9UFP1 575 aa11.84□□□□□ -0.51
SETX-204ENST00000474172 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.84□□□□□ -0.51
SETX-204ENST00000474172 GOLGB1Q14789 3259 aaKnown RBP11.84□□□□□ -0.51
SETX-204ENST00000474172 ARFGEF1Q9Y6D6 1849 aa11.83□□□□□ -0.51
SETX-204ENST00000474172 ROBO3Q96MS0 1386 aa11.83□□□□□ -0.52
SETX-204ENST00000474172 PTPDC1A2A3K4 754 aa11.83□□□□□ -0.52
SETX-204ENST00000474172 STX6O43752 255 aa11.83□□□□□ -0.52
SETX-204ENST00000474172 RASA1P20936 1047 aa11.83□□□□□ -0.52
SETX-204ENST00000474172 NTRK3Q16288 839 aa11.83□□□□□ -0.52
SETX-204ENST00000474172 SHROOM1Q2M3G4 852 aaPredicted RBP11.83□□□□□ -0.52
SETX-204ENST00000474172 OTUD7BQ6GQQ9 843 aa11.83□□□□□ -0.52
SETX-204ENST00000474172 FAM173BQ6P4H8 233 aa11.83□□□□□ -0.52
SETX-204ENST00000474172 RSBN1LQ6PCB5 846 aaPredicted RBP11.83□□□□□ -0.52
SETX-204ENST00000474172 CDC37L1Q7L3B6 337 aa11.83□□□□□ -0.52
SETX-204ENST00000474172 SGMS1Q86VZ5 419 aa11.83□□□□□ -0.52
SETX-204ENST00000474172 TEKT1Q969V4 418 aa11.83□□□□□ -0.52
SETX-204ENST00000474172 AIFM3Q96NN9 605 aa11.83□□□□□ -0.52
SETX-204ENST00000474172 CNNM2Q9H8M5 875 aa11.83□□□□□ -0.52
SETX-204ENST00000474172 ARPP21Q9UBL0 812 aaPredicted RBP11.83□□□□□ -0.52
SETX-204ENST00000474172 TNKSO95271 1327 aa11.83□□□□□ -0.52
SETX-204ENST00000474172 POLR3DP05423 398 aaPredicted RBP11.82□□□□□ -0.52
SETX-204ENST00000474172 ZSCAN22P10073 491 aaPredicted RBP11.82□□□□□ -0.52
SETX-204ENST00000474172 LIFRP42702 1097 aa11.82□□□□□ -0.52
SETX-204ENST00000474172 CDK8P49336 464 aa11.82□□□□□ -0.52
SETX-204ENST00000474172 GABPAQ06546 454 aa11.82□□□□□ -0.52
SETX-204ENST00000474172 CFAP100Q494V2 611 aa11.82□□□□□ -0.52
SETX-204ENST00000474172 RASGRP2Q7LDG7 609 aa11.82□□□□□ -0.52
SETX-204ENST00000474172 CMTR1Q8N1G2 835 aaKnown RBP11.82□□□□□ -0.52
SETX-204ENST00000474172 ZSCAN10Q96SZ4 725 aaPredicted RBP11.82□□□□□ -0.52
SETX-204ENST00000474172 NOL10Q9BSC4 688 aaKnown RBP11.82□□□□□ -0.52
SETX-204ENST00000474172 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.82□□□□□ -0.52
SETX-204ENST00000474172 MRIQ9BWK5 157 aa11.82□□□□□ -0.52
SETX-204ENST00000474172 RNF41Q9H4P4 317 aaPredicted RBP11.82□□□□□ -0.52
SETX-204ENST00000474172 TDRD3Q9H7E2 651 aaKnown RBP11.82□□□□□ -0.52
SETX-204ENST00000474172 DDTLA6NHG4 134 aaPredicted RBP11.81□□□□□ -0.52
SETX-204ENST00000474172 TFAP4Q01664 338 aa11.81□□□□□ -0.52
SETX-204ENST00000474172 GUCY1B3Q02153 619 aa11.81□□□□□ -0.52
SETX-204ENST00000474172 TCP10Q12799 353 aa11.81□□□□□ -0.52
SETX-204ENST00000474172 WTAPQ15007 396 aa11.81□□□□□ -0.52
SETX-204ENST00000474172 LARP1BQ659C4 914 aaKnown RBP11.81□□□□□ -0.52
SETX-204ENST00000474172 C16orf86Q6ZW13 317 aa11.81□□□□□ -0.52
SETX-204ENST00000474172 FERMT3Q86UX7 667 aa11.81□□□□□ -0.52
SETX-204ENST00000474172 MICU3Q86XE3 530 aa11.81□□□□□ -0.52
SETX-204ENST00000474172 SLF2Q8IX21 1173 aa11.81□□□□□ -0.52
SETX-204ENST00000474172 ESR2Q92731 530 aa11.81□□□□□ -0.52
SETX-204ENST00000474172 CHMP4CQ96CF2 233 aa11.81□□□□□ -0.52
SETX-204ENST00000474172 SHISA4Q96DD7 197 aa11.81□□□□□ -0.52
SETX-204ENST00000474172 ZNRF3Q9ULT6 936 aa11.81□□□□□ -0.52
SETX-204ENST00000474172 FAM196BA6NMK8 535 aa11.8□□□□□ -0.52
SETX-204ENST00000474172 ZBTB43O43298 467 aa11.8□□□□□ -0.52
SETX-204ENST00000474172 F13A1P00488 732 aa11.8□□□□□ -0.52
SETX-204ENST00000474172 EGFRP00533 1210 aa11.8□□□□□ -0.52
SETX-204ENST00000474172 PLCG2P16885 1265 aa11.8□□□□□ -0.52
SETX-204ENST00000474172 GUCY1A2P33402 732 aa11.8□□□□□ -0.52
SETX-204ENST00000474172 RBM5P52756 815 aaKnown RBP eCLIP11.8□□□□□ -0.52
SETX-204ENST00000474172 JAG1P78504 1218 aa11.8□□□□□ -0.52
SETX-204ENST00000474172 HDLBPQ00341 1268 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms