RNA–Protein interactions for RNA: ENST00000473809.5

ATP5C1-208, Transcript of ATP synthase subunit gamma, mitochondrial, human

TSL 2

Gene ATP5C1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP5C1-208	ENST00000473809	PPP1R1B	Q9UD71	204 aa	Predicted RBP	5.53	□□□□□ -1.52
ATP5C1-208	ENST00000473809	PCDHA4	Q9UN74	947 aa		5.53	□□□□□ -1.52
ATP5C1-208	ENST00000473809	SYNGAP1	Q96PV0	1343 aa		5.52	□□□□□ -1.53
ATP5C1-208	ENST00000473809	DCDC2C	A8MYV0	355 aa		5.52	□□□□□ -1.53
ATP5C1-208	ENST00000473809	TMPRSS2	O15393	492 aa		5.52	□□□□□ -1.53
ATP5C1-208	ENST00000473809	KLF4	O43474	513 aa		5.52	□□□□□ -1.53
ATP5C1-208	ENST00000473809	TIAF1	O95411	115 aa		5.52	□□□□□ -1.53
ATP5C1-208	ENST00000473809	GTF2F1	P35269	517 aa	Known RBP eCLIP	5.52	□□□□□ -1.53
ATP5C1-208	ENST00000473809	GIPR	P48546	466 aa		5.52	□□□□□ -1.53
ATP5C1-208	ENST00000473809	COL9A2	Q14055	689 aa	Predicted RBP	5.52	□□□□□ -1.53
ATP5C1-208	ENST00000473809	WIPI1	Q5MNZ9	446 aa	Predicted RBP	5.52	□□□□□ -1.53
ATP5C1-208	ENST00000473809	EXOSC6	Q5RKV6	272 aa	Known RBP	5.52	□□□□□ -1.53
ATP5C1-208	ENST00000473809	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	5.52	□□□□□ -1.53
ATP5C1-208	ENST00000473809	C12orf40	Q86WS4	652 aa		5.52	□□□□□ -1.53
ATP5C1-208	ENST00000473809	VPS37D	Q86XT2	251 aa		5.52	□□□□□ -1.53
ATP5C1-208	ENST00000473809	GSX1	Q9H4S2	264 aa	Predicted RBP	5.52	□□□□□ -1.53
ATP5C1-208	ENST00000473809	DISC1	Q9NRI5	854 aa		5.52	□□□□□ -1.53
ATP5C1-208	ENST00000473809	USP21	Q9UK80	565 aa		5.52	□□□□□ -1.53
ATP5C1-208	ENST00000473809	ZNRF3	Q9ULT6	936 aa		5.52	□□□□□ -1.53
ATP5C1-208	ENST00000473809	MRVI1	Q9Y6F6	885 aa		5.52	□□□□□ -1.53
ATP5C1-208	ENST00000473809	RBAK-RBAKDN	I3L0D1	243 aa		5.51	□□□□□ -1.53
ATP5C1-208	ENST00000473809	ADGRE1	Q14246	886 aa		5.51	□□□□□ -1.53
ATP5C1-208	ENST00000473809	PDE3A	Q14432	1141 aa		5.51	□□□□□ -1.53
ATP5C1-208	ENST00000473809	MBTPS1	Q14703	1052 aa		5.51	□□□□□ -1.53
ATP5C1-208	ENST00000473809	DUOXA2	Q1HG44	320 aa		5.51	□□□□□ -1.53
ATP5C1-208	ENST00000473809	CWF19L2	Q2TBE0	894 aa	Known RBP	5.51	□□□□□ -1.53
ATP5C1-208	ENST00000473809	IGF2-AS	Q6U949	168 aa		5.51	□□□□□ -1.53
ATP5C1-208	ENST00000473809	GK5	Q6ZS86	529 aa		5.51	□□□□□ -1.53
ATP5C1-208	ENST00000473809	UBE3D	Q7Z6J8	389 aa		5.51	□□□□□ -1.53
ATP5C1-208	ENST00000473809	RBBP8NL	Q8NC74	664 aa	Predicted RBP	5.51	□□□□□ -1.53
ATP5C1-208	ENST00000473809	SRRT	Q9BXP5	876 aa	Known RBP	5.51	□□□□□ -1.53
ATP5C1-208	ENST00000473809	LNPK	Q9C0E8	428 aa		5.51	□□□□□ -1.53
ATP5C1-208	ENST00000473809	CRIM1	Q9NZV1	1036 aa		5.51	□□□□□ -1.53
ATP5C1-208	ENST00000473809	HIF3A	Q9Y2N7	669 aa		5.51	□□□□□ -1.53
ATP5C1-208	ENST00000473809	PCDHB14	Q9Y5E9	798 aa		5.51	□□□□□ -1.53
ATP5C1-208	ENST00000473809	CSAD	Q9Y600	493 aa		5.51	□□□□□ -1.53
ATP5C1-208	ENST00000473809	SNCAIP	Q9Y6H5	919 aa		5.51	□□□□□ -1.53
ATP5C1-208	ENST00000473809		F8W735	103 aa	Predicted RBP	5.5	□□□□□ -1.53
ATP5C1-208	ENST00000473809	ALX3	O95076	343 aa		5.5	□□□□□ -1.53
ATP5C1-208	ENST00000473809	NEFM	P07197	916 aa		5.5	□□□□□ -1.53
ATP5C1-208	ENST00000473809	DRD2	P14416	443 aa		5.5	□□□□□ -1.53
ATP5C1-208	ENST00000473809	SERINC3	Q13530	473 aa		5.5	□□□□□ -1.53
ATP5C1-208	ENST00000473809	RUFY4	Q6ZNE9	571 aa		5.5	□□□□□ -1.53
ATP5C1-208	ENST00000473809	DPH6	Q7L8W6	267 aa		5.5	□□□□□ -1.53
ATP5C1-208	ENST00000473809	AGGF1	Q8N302	714 aa	eCLIP	5.5	□□□□□ -1.53
ATP5C1-208	ENST00000473809	TMEM130	Q8N3G9	435 aa		5.5	□□□□□ -1.53
ATP5C1-208	ENST00000473809	SMG8	Q8ND04	991 aa	Known RBP	5.5	□□□□□ -1.53
ATP5C1-208	ENST00000473809	FANCD2OS	Q96PS1	177 aa		5.5	□□□□□ -1.53
ATP5C1-208	ENST00000473809	SUGCT	Q9HAC7	445 aa		5.5	□□□□□ -1.53
ATP5C1-208	ENST00000473809	HTR3B	O95264	441 aa		5.49	□□□□□ -1.53
ATP5C1-208	ENST00000473809	TAL1	P17542	331 aa	Predicted RBP	5.49	□□□□□ -1.53
ATP5C1-208	ENST00000473809	MCM4	P33991	863 aa		5.49	□□□□□ -1.53
ATP5C1-208	ENST00000473809	ZNF165	P49910	485 aa		5.49	□□□□□ -1.53
ATP5C1-208	ENST00000473809	ERVK-24	P63145	666 aa		5.49	□□□□□ -1.53
ATP5C1-208	ENST00000473809	PPM1J	Q5JR12	505 aa		5.49	□□□□□ -1.53
ATP5C1-208	ENST00000473809		Q6ZS46	218 aa		5.49	□□□□□ -1.53
ATP5C1-208	ENST00000473809	ACAD11	Q709F0	780 aa		5.49	□□□□□ -1.53
ATP5C1-208	ENST00000473809	LSR	Q86X29	649 aa	Predicted RBP	5.49	□□□□□ -1.53
ATP5C1-208	ENST00000473809	LENG1	Q96BZ8	264 aa	Predicted RBP	5.49	□□□□□ -1.53
ATP5C1-208	ENST00000473809	ACSBG1	Q96GR2	724 aa		5.49	□□□□□ -1.53
ATP5C1-208	ENST00000473809	RUSC1	Q9BVN2	902 aa		5.49	□□□□□ -1.53
ATP5C1-208	ENST00000473809	KRTAP4-9	Q9BYQ8	210 aa		5.49	□□□□□ -1.53
ATP5C1-208	ENST00000473809	TNKS2	Q9H2K2	1166 aa		5.49	□□□□□ -1.53
ATP5C1-208	ENST00000473809	PIF1	Q9H611	641 aa		5.49	□□□□□ -1.53
ATP5C1-208	ENST00000473809	FBRS	Q9HAH7	460 aa		5.49	□□□□□ -1.53
ATP5C1-208	ENST00000473809	STRIP2	Q9ULQ0	834 aa		5.49	□□□□□ -1.53
ATP5C1-208	ENST00000473809	TACC3	Q9Y6A5	838 aa		5.49	□□□□□ -1.53
ATP5C1-208	ENST00000473809	MEIS3P2	A8K0S8	358 aa		5.48	□□□□□ -1.53
ATP5C1-208	ENST00000473809	ACR	P10323	421 aa		5.48	□□□□□ -1.53
ATP5C1-208	ENST00000473809	ADH5	P11766	374 aa		5.48	□□□□□ -1.53
ATP5C1-208	ENST00000473809	LMNB1	P20700	586 aa		5.48	□□□□□ -1.53
ATP5C1-208	ENST00000473809	GRK4	P32298	578 aa		5.48	□□□□□ -1.53
ATP5C1-208	ENST00000473809	ID3	Q02535	119 aa		5.48	□□□□□ -1.53
ATP5C1-208	ENST00000473809	SOX4	Q06945	474 aa	Predicted RBP	5.48	□□□□□ -1.53
ATP5C1-208	ENST00000473809	TMEM201	Q5SNT2	666 aa		5.48	□□□□□ -1.53
ATP5C1-208	ENST00000473809	ZBTB37	Q5TC79	503 aa		5.48	□□□□□ -1.53
ATP5C1-208	ENST00000473809	C2CD4A	Q8NCU7	369 aa	Predicted RBP	5.48	□□□□□ -1.53
ATP5C1-208	ENST00000473809	ACSF2	Q96CM8	615 aa	Predicted RBP	5.48	□□□□□ -1.53
ATP5C1-208	ENST00000473809	MRPL18	Q9H0U6	180 aa	Known RBP	5.48	□□□□□ -1.53
ATP5C1-208	ENST00000473809	REV1	Q9UBZ9	1251 aa		5.48	□□□□□ -1.53
ATP5C1-208	ENST00000473809	ARID1B	Q8NFD5	2236 aa	Predicted RBP	5.47	□□□□□ -1.53
ATP5C1-208	ENST00000473809	SLC22A31	A6NKX4	558 aa		5.47	□□□□□ -1.53
ATP5C1-208	ENST00000473809	CHURC1-FNTB	B4DL54	471 aa		5.47	□□□□□ -1.53
ATP5C1-208	ENST00000473809	SMAD7	O15105	426 aa	Known RBP	5.47	□□□□□ -1.53
ATP5C1-208	ENST00000473809	BPNT1	O95861	308 aa		5.47	□□□□□ -1.53
ATP5C1-208	ENST00000473809	SSB	P05455	408 aa	Known RBP eCLIP	5.47	□□□□□ -1.53
ATP5C1-208	ENST00000473809	NKG7	Q16617	165 aa		5.47	□□□□□ -1.53
ATP5C1-208	ENST00000473809	CCDC144B	Q3MJ40	725 aa		5.47	□□□□□ -1.53
ATP5C1-208	ENST00000473809	AKAP4	Q5JQC9	854 aa		5.47	□□□□□ -1.53
ATP5C1-208	ENST00000473809	ANKS3	Q6ZW76	656 aa		5.47	□□□□□ -1.53
ATP5C1-208	ENST00000473809	HDX	Q7Z353	690 aa		5.47	□□□□□ -1.53
ATP5C1-208	ENST00000473809	SLC51A	Q86UW1	340 aa		5.47	□□□□□ -1.53
ATP5C1-208	ENST00000473809	CELF2-AS1	Q8N7Q2	184 aa		5.47	□□□□□ -1.53
ATP5C1-208	ENST00000473809	MICAL1	Q8TDZ2	1067 aa		5.47	□□□□□ -1.53
ATP5C1-208	ENST00000473809	HNRNPLL	Q8WVV9	542 aa	Known RBP	5.47	□□□□□ -1.53
ATP5C1-208	ENST00000473809	ANAPC16	Q96DE5	110 aa		5.47	□□□□□ -1.53
ATP5C1-208	ENST00000473809	UBL7	Q96S82	380 aa	Predicted RBP	5.47	□□□□□ -1.53
ATP5C1-208	ENST00000473809	WNT10A	Q9GZT5	417 aa		5.47	□□□□□ -1.53
ATP5C1-208	ENST00000473809	RNF208	Q9H0X6	261 aa		5.47	□□□□□ -1.53
ATP5C1-208	ENST00000473809	FAM105A	Q9NUU6	356 aa		5.47	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms