RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 ALFQ53S48 1182 aa7.34□□□□□ -1.23
RTF1-203ENST00000473214 CCDC102BQ68D86 513 aa7.34□□□□□ -1.23
RTF1-203ENST00000473214 LRRC27Q9C0I9 530 aa7.34□□□□□ -1.23
RTF1-203ENST00000473214 MUC3BQ9H195 1237 aa7.34□□□□□ -1.23
RTF1-203ENST00000473214 TAGLN3Q9UI15 199 aa7.34□□□□□ -1.23
RTF1-203ENST00000473214 SPG7Q9UQ90 795 aa7.34□□□□□ -1.23
RTF1-203ENST00000473214 PCDHGA11Q9Y5H2 935 aa7.34□□□□□ -1.23
RTF1-203ENST00000473214 GJA3Q9Y6H8 435 aa7.34□□□□□ -1.23
RTF1-203ENST00000473214 ZCCHC11Q5TAX3 1644 aaKnown RBP7.34□□□□□ -1.24
RTF1-203ENST00000473214 KIAA0586Q9BVV6 1533 aa7.33□□□□□ -1.24
RTF1-203ENST00000473214 ALG1L2C9J202 215 aa7.33□□□□□ -1.24
RTF1-203ENST00000473214 IFIT2P09913 472 aaKnown RBP7.33□□□□□ -1.24
RTF1-203ENST00000473214 NASPP49321 788 aaPredicted RBP7.33□□□□□ -1.24
RTF1-203ENST00000473214 IFRD2Q12894 506 aaPredicted RBP7.33□□□□□ -1.24
RTF1-203ENST00000473214 SYT9Q86SS6 491 aa7.33□□□□□ -1.24
RTF1-203ENST00000473214 SMAP1Q8IYB5 467 aaPredicted RBP7.33□□□□□ -1.24
RTF1-203ENST00000473214 TTC8Q8TAM2 541 aa7.33□□□□□ -1.24
RTF1-203ENST00000473214 RASGRP4Q8TDF6 673 aa7.33□□□□□ -1.24
RTF1-203ENST00000473214 ALKBH8Q96BT7 664 aaKnown RBP7.33□□□□□ -1.24
RTF1-203ENST00000473214 FAM129BQ96TA1 746 aa7.33□□□□□ -1.24
RTF1-203ENST00000473214 NIF3L1Q9GZT8 377 aa7.33□□□□□ -1.24
RTF1-203ENST00000473214 PUF60Q9UHX1 559 aaKnown RBP7.33□□□□□ -1.24
RTF1-203ENST00000473214 HDAC9Q9UKV0 1011 aa7.33□□□□□ -1.24
RTF1-203ENST00000473214 PPP2R3BQ9Y5P8 575 aa7.33□□□□□ -1.24
RTF1-203ENST00000473214 PARP3Q9Y6F1 533 aa7.33□□□□□ -1.24
RTF1-203ENST00000473214 MADDQ8WXG6 1647 aa7.33□□□□□ -1.24
RTF1-203ENST00000473214 TEX14Q8IWB6 1497 aa7.32□□□□□ -1.24
RTF1-203ENST00000473214 SPDYE3A6NKU9 549 aa7.32□□□□□ -1.24
RTF1-203ENST00000473214 ADARB2-AS1A8MUL3 147 aa7.32□□□□□ -1.24
RTF1-203ENST00000473214 RASGRP1O95267 797 aa7.32□□□□□ -1.24
RTF1-203ENST00000473214 IGHA2P01877 340 aa7.32□□□□□ -1.24
RTF1-203ENST00000473214 CT47B1P0C2W7 299 aaPredicted RBP7.32□□□□□ -1.24
RTF1-203ENST00000473214 ALAS2P22557 587 aa7.32□□□□□ -1.24
RTF1-203ENST00000473214 RRM1P23921 792 aa7.32□□□□□ -1.24
RTF1-203ENST00000473214 WEE1P30291 646 aa7.32□□□□□ -1.24
RTF1-203ENST00000473214 TXLNAP40222 546 aa7.32□□□□□ -1.24
RTF1-203ENST00000473214 PPM1FP49593 454 aaPredicted RBP7.32□□□□□ -1.24
RTF1-203ENST00000473214 GTF2IP78347 998 aa7.32□□□□□ -1.24
RTF1-203ENST00000473214 FAM160A1Q05DH4 1040 aa7.32□□□□□ -1.24
RTF1-203ENST00000473214 SQSTM1Q13501 440 aa7.32□□□□□ -1.24
RTF1-203ENST00000473214 COL9A3Q14050 684 aaPredicted RBP7.32□□□□□ -1.24
RTF1-203ENST00000473214 MORC3Q14149 939 aa7.32□□□□□ -1.24
RTF1-203ENST00000473214 ANO1Q5XXA6 986 aa7.32□□□□□ -1.24
RTF1-203ENST00000473214 DDX42Q86XP3 938 aaKnown RBP eCLIP7.32□□□□□ -1.24
RTF1-203ENST00000473214 SPICE1Q8N0Z3 855 aa7.32□□□□□ -1.24
RTF1-203ENST00000473214 ZDHHC1Q8WTX9 485 aa7.32□□□□□ -1.24
RTF1-203ENST00000473214 SCHIP1Q9P0W5 487 aaPredicted RBP7.32□□□□□ -1.24
RTF1-203ENST00000473214 ZNF69Q9UC07 566 aa7.32□□□□□ -1.24
RTF1-203ENST00000473214 AKAP2Q9Y2D5 859 aa7.32□□□□□ -1.24
RTF1-203ENST00000473214 DAAM1Q9Y4D1 1078 aa7.32□□□□□ -1.24
RTF1-203ENST00000473214 TMEM238LA0A1B0GVL6 79 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 SIN3BO75182 1162 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 EIF4BP23588 611 aaKnown RBP7.31□□□□□ -1.24
RTF1-203ENST00000473214 GEMIN4P57678 1058 aaKnown RBP7.31□□□□□ -1.24
RTF1-203ENST00000473214 MCL1Q07820 350 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 CCDC93Q567U6 631 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 PRSS36Q5K4E3 855 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 BICDL1Q6ZP65 573 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 CPXCR1Q8N123 301 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 ATL2Q8NHH9 583 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 CHAC2Q8WUX2 184 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 C7orf43Q8WVR3 580 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 COL26A1Q96A83 441 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 ERP27Q96DN0 273 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 PRDM6Q9NQX0 595 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 ZIM2Q9NZV7 527 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 POLG2Q9UHN1 485 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 MCM8Q9UJA3 840 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 ASAP1Q9ULH1 1129 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 LEMD3Q9Y2U8 911 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 RABGAP1Q9Y3P9 1069 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 KDM5BQ9UGL1 1544 aa7.31□□□□□ -1.24
RTF1-203ENST00000473214 UHRF1BP1LA0JNW5 1464 aa7.3□□□□□ -1.24
RTF1-203ENST00000473214 EML1O00423 815 aa7.3□□□□□ -1.24
RTF1-203ENST00000473214 BACH1O14867 736 aa7.3□□□□□ -1.24
RTF1-203ENST00000473214 KCNQ2O43526 872 aa7.3□□□□□ -1.24
RTF1-203ENST00000473214 FZD6O60353 706 aa7.3□□□□□ -1.24
RTF1-203ENST00000473214 APBA3O96018 575 aa7.3□□□□□ -1.24
RTF1-203ENST00000473214 PMLP29590 882 aa7.3□□□□□ -1.24
RTF1-203ENST00000473214 RAB27AP51159 221 aa7.3□□□□□ -1.24
RTF1-203ENST00000473214 TEAD4Q15561 434 aa7.3□□□□□ -1.24
RTF1-203ENST00000473214 LONRF1Q17RB8 773 aa7.3□□□□□ -1.24
RTF1-203ENST00000473214 PRRT3Q5FWE3 981 aa7.3□□□□□ -1.24
RTF1-203ENST00000473214 CT47A1Q5JQC4 288 aaPredicted RBP7.3□□□□□ -1.24
RTF1-203ENST00000473214 ERAP2Q6P179 960 aa7.3□□□□□ -1.24
RTF1-203ENST00000473214 ANKRD42Q8N9B4 389 aa7.3□□□□□ -1.24
RTF1-203ENST00000473214 GAS2L2Q8NHY3 880 aa7.3□□□□□ -1.24
RTF1-203ENST00000473214 SRRTQ9BXP5 876 aaKnown RBP7.3□□□□□ -1.24
RTF1-203ENST00000473214 KRTAP9-9Q9BYP9 154 aa7.3□□□□□ -1.24
RTF1-203ENST00000473214 KRTAP9-4Q9BYQ2 154 aa7.3□□□□□ -1.24
RTF1-203ENST00000473214 EVLQ9UI08 416 aaPredicted RBP7.3□□□□□ -1.24
RTF1-203ENST00000473214 FBXO2Q9UK22 296 aaPredicted RBP7.3□□□□□ -1.24
RTF1-203ENST00000473214 WASHC2CQ9Y4E1 1318 aa7.29□□□□□ -1.24
RTF1-203ENST00000473214 CBFA2T2O43439 604 aa7.29□□□□□ -1.24
RTF1-203ENST00000473214 TCEA3O75764 348 aa7.29□□□□□ -1.24
RTF1-203ENST00000473214 POU3F3P20264 500 aaPredicted RBP7.29□□□□□ -1.24
RTF1-203ENST00000473214 EIF1AXP47813 144 aaKnown RBP7.29□□□□□ -1.24
RTF1-203ENST00000473214 TCEA2Q15560 299 aa7.29□□□□□ -1.24
RTF1-203ENST00000473214 ALDH1L2Q3SY69 923 aa7.29□□□□□ -1.24
RTF1-203ENST00000473214 DALRD3Q5D0E6 543 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms