RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 SLC4A8Q2Y0W8 1093 aa14.41□□□□□ -0.1
CLRN1-205ENST00000472224 ANKRD45Q5TZF3 282 aa14.41□□□□□ -0.1
CLRN1-205ENST00000472224 TEX11Q8IYF3 940 aa14.41□□□□□ -0.1
CLRN1-205ENST00000472224 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.41□□□□□ -0.1
CLRN1-205ENST00000472224 FAM151AQ8WW52 585 aa14.41□□□□□ -0.1
CLRN1-205ENST00000472224 RFX7Q2KHR2 1363 aa14.41□□□□□ -0.1
CLRN1-205ENST00000472224 NAV1Q8NEY1 1877 aa14.4□□□□□ -0.1
CLRN1-205ENST00000472224 WDHD1O75717 1129 aaPredicted RBP14.4□□□□□ -0.1
CLRN1-205ENST00000472224 BAG3O95817 575 aa14.4□□□□□ -0.1
CLRN1-205ENST00000472224 ATP5JP18859 108 aa14.4□□□□□ -0.1
CLRN1-205ENST00000472224 RHBDL3P58872 404 aa14.4□□□□□ -0.1
CLRN1-205ENST00000472224 DCAF15Q66K64 600 aa14.4□□□□□ -0.1
CLRN1-205ENST00000472224 ADGRA1Q86SQ6 560 aa14.4□□□□□ -0.1
CLRN1-205ENST00000472224 ZFPM1Q8IX07 1006 aa14.4□□□□□ -0.1
CLRN1-205ENST00000472224 MIGA1Q8NAN2 632 aa14.4□□□□□ -0.1
CLRN1-205ENST00000472224 SH3RF3Q8TEJ3 882 aaPredicted RBP14.4□□□□□ -0.1
CLRN1-205ENST00000472224 SHISA4Q96DD7 197 aa14.4□□□□□ -0.1
CLRN1-205ENST00000472224 HOOK2Q96ED9 719 aa14.4□□□□□ -0.1
CLRN1-205ENST00000472224 RWDD1Q9H446 243 aaPredicted RBP14.4□□□□□ -0.1
CLRN1-205ENST00000472224 DDX4Q9NQI0 724 aaKnown RBP14.4□□□□□ -0.1
CLRN1-205ENST00000472224 ECHDC1Q9NTX5 307 aa14.4□□□□□ -0.1
CLRN1-205ENST00000472224 PAG1Q9NWQ8 432 aa14.4□□□□□ -0.1
CLRN1-205ENST00000472224 TESPA1A2RU30 521 aaPredicted RBP14.39□□□□□ -0.11
CLRN1-205ENST00000472224 USP2O75604 605 aaPredicted RBP14.39□□□□□ -0.11
CLRN1-205ENST00000472224 PLCG2P16885 1265 aa14.39□□□□□ -0.11
CLRN1-205ENST00000472224 MIGA2Q7L4E1 593 aa14.39□□□□□ -0.11
CLRN1-205ENST00000472224 NBPF11Q86T75 865 aa14.39□□□□□ -0.11
CLRN1-205ENST00000472224 SH3TC2Q8TF17 1288 aa14.39□□□□□ -0.11
CLRN1-205ENST00000472224 HAUS7Q99871 368 aa14.39□□□□□ -0.11
CLRN1-205ENST00000472224 IDI2Q9BXS1 227 aa14.39□□□□□ -0.11
CLRN1-205ENST00000472224 SOX1O00570 391 aaPredicted RBP14.38□□□□□ -0.11
CLRN1-205ENST00000472224 ENTPD3O75355 529 aa14.38□□□□□ -0.11
CLRN1-205ENST00000472224 PDE6AP16499 860 aa14.38□□□□□ -0.11
CLRN1-205ENST00000472224 DYNLL1P63167 89 aaKnown RBP14.38□□□□□ -0.11
CLRN1-205ENST00000472224 SLC9C2Q5TAH2 1124 aa14.38□□□□□ -0.11
CLRN1-205ENST00000472224 B4GALNT3Q6L9W6 998 aa14.38□□□□□ -0.11
CLRN1-205ENST00000472224 ANKRD13AQ8IZ07 590 aa14.38□□□□□ -0.11
CLRN1-205ENST00000472224 OTUD7AQ8TE49 926 aaPredicted RBP14.38□□□□□ -0.11
CLRN1-205ENST00000472224 WRNIP1Q96S55 665 aa14.38□□□□□ -0.11
CLRN1-205ENST00000472224 ELP3Q9H9T3 547 aa14.38□□□□□ -0.11
CLRN1-205ENST00000472224 CSADQ9Y600 493 aa14.38□□□□□ -0.11
CLRN1-205ENST00000472224 ATAD5Q96QE3 1844 aa14.37□□□□□ -0.11
CLRN1-205ENST00000472224 OTUD7BQ6GQQ9 843 aa14.37□□□□□ -0.11
CLRN1-205ENST00000472224 MAPKAPK5Q8IW41 473 aa14.37□□□□□ -0.11
CLRN1-205ENST00000472224 TGFBRAP1Q8WUH2 860 aa14.37□□□□□ -0.11
CLRN1-205ENST00000472224 ZNF341Q9BYN7 854 aa14.37□□□□□ -0.11
CLRN1-205ENST00000472224 DOCK1Q14185 1865 aa14.37□□□□□ -0.11
CLRN1-205ENST00000472224 MAGEB6P1A0A0J9YX57 407 aa14.36□□□□□ -0.11
CLRN1-205ENST00000472224 DDTLA6NHG4 134 aaPredicted RBP14.36□□□□□ -0.11
CLRN1-205ENST00000472224 IGSF3O75054 1194 aa14.36□□□□□ -0.11
CLRN1-205ENST00000472224 MAP4K4O95819 1239 aaPredicted RBP14.36□□□□□ -0.11
CLRN1-205ENST00000472224 IGHDP01880 384 aa14.36□□□□□ -0.11
CLRN1-205ENST00000472224 MX1P20591 662 aa14.36□□□□□ -0.11
CLRN1-205ENST00000472224 MNX1P50219 401 aaPredicted RBP14.36□□□□□ -0.11
CLRN1-205ENST00000472224 VASPP50552 380 aaPredicted RBP14.36□□□□□ -0.11
CLRN1-205ENST00000472224 VGLL4Q14135 290 aa14.36□□□□□ -0.11
CLRN1-205ENST00000472224 SH3BP5LQ7L8J4 393 aa14.36□□□□□ -0.11
CLRN1-205ENST00000472224 UBE2Q1Q7Z7E8 422 aa14.36□□□□□ -0.11
CLRN1-205ENST00000472224 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.36□□□□□ -0.11
CLRN1-205ENST00000472224 DPF3Q92784 378 aa14.36□□□□□ -0.11
CLRN1-205ENST00000472224 MS4A4AQ96JQ5 239 aa14.36□□□□□ -0.11
CLRN1-205ENST00000472224 LNPKQ9C0E8 428 aa14.36□□□□□ -0.11
CLRN1-205ENST00000472224 ARHGAP39Q9C0H5 1083 aa14.36□□□□□ -0.11
CLRN1-205ENST00000472224 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.36□□□□□ -0.11
CLRN1-205ENST00000472224 OSBPL5Q9H0X9 879 aaPredicted RBP14.36□□□□□ -0.11
CLRN1-205ENST00000472224 FLT1P17948 1338 aa14.36□□□□□ -0.11
CLRN1-205ENST00000472224 ZNF532Q9HCE3 1301 aa14.36□□□□□ -0.11
CLRN1-205ENST00000472224 SIPA1L1O43166 1804 aa14.36□□□□□ -0.11
CLRN1-205ENST00000472224 BAZ2AQ9UIF9 1905 aaKnown RBP14.35□□□□□ -0.11
CLRN1-205ENST00000472224 UNCXA6NJT0 531 aa14.35□□□□□ -0.11
CLRN1-205ENST00000472224 ERC2O15083 957 aa14.35□□□□□ -0.11
CLRN1-205ENST00000472224 INPP5BP32019 993 aa14.35□□□□□ -0.11
CLRN1-205ENST00000472224 USP5P45974 858 aa14.35□□□□□ -0.11
CLRN1-205ENST00000472224 PPP4CP60510 307 aa14.35□□□□□ -0.11
CLRN1-205ENST00000472224 MAP3K9P80192 1104 aa14.35□□□□□ -0.11
CLRN1-205ENST00000472224 SLFNL1Q499Z3 407 aa14.35□□□□□ -0.11
CLRN1-205ENST00000472224 ZKSCAN4Q969J2 545 aaPredicted RBP14.35□□□□□ -0.11
CLRN1-205ENST00000472224 LRCH3Q96II8 777 aa14.35□□□□□ -0.11
CLRN1-205ENST00000472224 SAP30BPQ9UHR5 308 aaKnown RBP14.35□□□□□ -0.11
CLRN1-205ENST00000472224 TTC41PQ6P2S7 1318 aa14.35□□□□□ -0.11
CLRN1-205ENST00000472224 COL2A1P02458 1487 aaPredicted RBP14.34□□□□□ -0.11
CLRN1-205ENST00000472224 FAM196BA6NMK8 535 aa14.34□□□□□ -0.11
CLRN1-205ENST00000472224 SLURP2P0DP57 97 aa14.34□□□□□ -0.11
CLRN1-205ENST00000472224 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.34□□□□□ -0.11
CLRN1-205ENST00000472224 BRI3BPQ8WY22 251 aa14.34□□□□□ -0.11
CLRN1-205ENST00000472224 OPTNQ96CV9 577 aa14.34□□□□□ -0.11
CLRN1-205ENST00000472224 DDX60LQ5H9U9 1706 aaKnown RBP14.34□□□□□ -0.11
CLRN1-205ENST00000472224 ATRNL1Q5VV63 1379 aa14.34□□□□□ -0.11
CLRN1-205ENST00000472224 MYH8P13535 1937 aa14.33□□□□□ -0.11
CLRN1-205ENST00000472224 GLRX3O76003 335 aaKnown RBP14.33□□□□□ -0.12
CLRN1-205ENST00000472224 CHGBP05060 677 aa14.33□□□□□ -0.12
CLRN1-205ENST00000472224 PRR29P0C7W0 189 aa14.33□□□□□ -0.12
CLRN1-205ENST00000472224 ADD2P35612 726 aa14.33□□□□□ -0.12
CLRN1-205ENST00000472224 MTFR1Q15390 333 aa14.33□□□□□ -0.12
CLRN1-205ENST00000472224 ZSCAN25Q6NSZ9 544 aa14.33□□□□□ -0.12
CLRN1-205ENST00000472224 TMED8Q6PL24 325 aaPredicted RBP14.33□□□□□ -0.12
CLRN1-205ENST00000472224 CERS3Q8IU89 383 aa14.33□□□□□ -0.12
CLRN1-205ENST00000472224 SMC5Q8IY18 1101 aa14.33□□□□□ -0.12
CLRN1-205ENST00000472224 TRIM34Q9BYJ4 488 aa14.33□□□□□ -0.12
CLRN1-205ENST00000472224 SNCAIPQ9Y6H5 919 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms