RNA–Protein interactions for RNA: ENST00000471603.6

PKD1-207, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,505 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-207ENST00000471603 CWC27Q6UX04 472 aaKnown RBP16.02■□□□□ 0.16
PKD1-207ENST00000471603 POTEDQ86YR6 584 aa16.02■□□□□ 0.16
PKD1-207ENST00000471603 DDX11Q96FC9 970 aa16.02■□□□□ 0.16
PKD1-207ENST00000471603 PDGFDQ9GZP0 370 aaPredicted RBP16.02■□□□□ 0.16
PKD1-207ENST00000471603 L1RE1Q9UN81 338 aa16.02■□□□□ 0.16
PKD1-207ENST00000471603 TAF1P21675 1872 aa16.02■□□□□ 0.15
PKD1-207ENST00000471603 IRF6O14896 467 aa16.02■□□□□ 0.15
PKD1-207ENST00000471603 MAP4K4O95819 1239 aaPredicted RBP16.02■□□□□ 0.15
PKD1-207ENST00000471603 GBP6Q6ZN66 633 aa16.02■□□□□ 0.15
PKD1-207ENST00000471603 C3orf67Q6ZVT6 689 aa16.02■□□□□ 0.15
PKD1-207ENST00000471603 RUFY2Q8WXA3 655 aa16.02■□□□□ 0.15
PKD1-207ENST00000471603 GREM2Q9H772 168 aa16.02■□□□□ 0.15
PKD1-207ENST00000471603 ZNF652Q9Y2D9 606 aa16.02■□□□□ 0.15
PKD1-207ENST00000471603 NTSR2O95665 410 aa16.01■□□□□ 0.15
PKD1-207ENST00000471603 NEDD9Q14511 834 aa16.01■□□□□ 0.15
PKD1-207ENST00000471603 ERFEQ4G0M1 354 aa16.01■□□□□ 0.15
PKD1-207ENST00000471603 HSP90B2PQ58FF3 399 aa16.01■□□□□ 0.15
PKD1-207ENST00000471603 MSL1Q68DK7 614 aa16.01■□□□□ 0.15
PKD1-207ENST00000471603 NECAB1Q8N987 351 aa16.01■□□□□ 0.15
PKD1-207ENST00000471603 GIMAP7Q8NHV1 300 aa16.01■□□□□ 0.15
PKD1-207ENST00000471603 ANKRD65E5RJM6 399 aa16.01■□□□□ 0.15
PKD1-207ENST00000471603 RABL6Q3YEC7 729 aaPredicted RBP16.01■□□□□ 0.15
PKD1-207ENST00000471603 TMED8Q6PL24 325 aaPredicted RBP16.01■□□□□ 0.15
PKD1-207ENST00000471603 TMC6Q7Z403 805 aa16.01■□□□□ 0.15
PKD1-207ENST00000471603 BPIFA3Q9BQP9 254 aa16.01■□□□□ 0.15
PKD1-207ENST00000471603 PUS3Q9BZE2 481 aaKnown RBP16.01■□□□□ 0.15
PKD1-207ENST00000471603 TPCN1Q9ULQ1 816 aa16.01■□□□□ 0.15
PKD1-207ENST00000471603 IRX1P78414 480 aaPredicted RBP16■□□□□ 0.15
PKD1-207ENST00000471603 PTPN12Q05209 780 aaKnown RBP16■□□□□ 0.15
PKD1-207ENST00000471603 MCM6Q14566 821 aa16■□□□□ 0.15
PKD1-207ENST00000471603 ADCK5Q3MIX3 580 aa16■□□□□ 0.15
PKD1-207ENST00000471603 MSANTD4Q8NCY6 345 aa16■□□□□ 0.15
PKD1-207ENST00000471603 FAXDC2Q96IV6 333 aa16■□□□□ 0.15
PKD1-207ENST00000471603 ACBD3Q9H3P7 528 aa16■□□□□ 0.15
PKD1-207ENST00000471603 CFAP45Q9UL16 551 aa16■□□□□ 0.15
PKD1-207ENST00000471603 SH3TC1Q8TE82 1336 aa16■□□□□ 0.15
PKD1-207ENST00000471603 RFX5P48382 616 aaPredicted RBP16■□□□□ 0.15
PKD1-207ENST00000471603 ANKRD1Q15327 319 aa16■□□□□ 0.15
PKD1-207ENST00000471603 HOMEZQ8IX15 550 aa16■□□□□ 0.15
PKD1-207ENST00000471603 CAMKK2Q96RR4 588 aa16■□□□□ 0.15
PKD1-207ENST00000471603 SETDB2Q96T68 719 aa16■□□□□ 0.15
PKD1-207ENST00000471603 ABCC12Q96J65 1359 aa15.99■□□□□ 0.15
PKD1-207ENST00000471603 MYH3P11055 1940 aa15.99■□□□□ 0.15
PKD1-207ENST00000471603 GYS1P13807 737 aa15.99■□□□□ 0.15
PKD1-207ENST00000471603 NFIXQ14938 502 aa15.99■□□□□ 0.15
PKD1-207ENST00000471603 LRRC24Q50LG9 513 aa15.99■□□□□ 0.15
PKD1-207ENST00000471603 HSP90AB4PQ58FF6 505 aa15.99■□□□□ 0.15
PKD1-207ENST00000471603 COL23A1Q86Y22 540 aaPredicted RBP15.99■□□□□ 0.15
PKD1-207ENST00000471603 AOPEPQ8N6M6 819 aa15.99■□□□□ 0.15
PKD1-207ENST00000471603 PRPF38AQ8NAV1 312 aaKnown RBP15.99■□□□□ 0.15
PKD1-207ENST00000471603 ALDH8A1Q9H2A2 487 aaPredicted RBP15.99■□□□□ 0.15
PKD1-207ENST00000471603 COL4A1P02462 1669 aa15.99■□□□□ 0.15
PKD1-207ENST00000471603 VWA3AA6NCI4 1184 aa15.99■□□□□ 0.15
PKD1-207ENST00000471603 TMCO5BA8MYB1 307 aa15.99■□□□□ 0.15
PKD1-207ENST00000471603 SASH1O94885 1247 aa15.99■□□□□ 0.15
PKD1-207ENST00000471603 TUBBP07437 444 aa15.99■□□□□ 0.15
PKD1-207ENST00000471603 ELF1P32519 619 aa15.99■□□□□ 0.15
PKD1-207ENST00000471603 NBPF5PQ86XG9 351 aaPredicted RBP15.99■□□□□ 0.15
PKD1-207ENST00000471603 TTLL11Q8NHH1 800 aa15.99■□□□□ 0.15
PKD1-207ENST00000471603 XPO4Q9C0E2 1151 aaKnown RBP15.99■□□□□ 0.15
PKD1-207ENST00000471603 ZKSCAN1P17029 563 aaPredicted RBP15.98■□□□□ 0.15
PKD1-207ENST00000471603 SCP2P22307 547 aa15.98■□□□□ 0.15
PKD1-207ENST00000471603 CTSWP56202 376 aa15.98■□□□□ 0.15
PKD1-207ENST00000471603 SF3B2Q13435 895 aaKnown RBP15.98■□□□□ 0.15
PKD1-207ENST00000471603 CLEC4GQ6UXB4 293 aa15.98■□□□□ 0.15
PKD1-207ENST00000471603 SLC51AQ86UW1 340 aa15.98■□□□□ 0.15
PKD1-207ENST00000471603 AKT1S1Q96B36 256 aa15.98■□□□□ 0.15
PKD1-207ENST00000471603 SEC31BQ9NQW1 1179 aa15.98■□□□□ 0.15
PKD1-207ENST00000471603 DDX60Q8IY21 1712 aaKnown RBP15.98■□□□□ 0.15
PKD1-207ENST00000471603 N4BP1O75113 896 aaKnown RBP15.98■□□□□ 0.15
PKD1-207ENST00000471603 NECTIN1Q15223 517 aa15.98■□□□□ 0.15
PKD1-207ENST00000471603 PRPF40BQ6NWY9 871 aaKnown RBP15.98■□□□□ 0.15
PKD1-207ENST00000471603 GBP3Q9H0R5 595 aa15.98■□□□□ 0.15
PKD1-207ENST00000471603 MCM8Q9UJA3 840 aa15.98■□□□□ 0.15
PKD1-207ENST00000471603 ATXN2Q99700 1313 aaKnown RBP15.98■□□□□ 0.15
PKD1-207ENST00000471603 ITGA6P23229 1130 aa15.97■□□□□ 0.15
PKD1-207ENST00000471603 PSMA5P28066 241 aa15.97■□□□□ 0.15
PKD1-207ENST00000471603 FMNL3Q8IVF7 1028 aa15.97■□□□□ 0.15
PKD1-207ENST00000471603 TLR7Q9NYK1 1049 aaKnown RBP15.97■□□□□ 0.15
PKD1-207ENST00000471603 SHOX2O60902 331 aaPredicted RBP15.97■□□□□ 0.15
PKD1-207ENST00000471603 RESTQ13127 1097 aa15.97■□□□□ 0.15
PKD1-207ENST00000471603 CCDC57Q2TAC2 916 aa15.97■□□□□ 0.15
PKD1-207ENST00000471603 KIFC2Q96AC6 838 aa15.97■□□□□ 0.15
PKD1-207ENST00000471603 CABS1Q96KC9 395 aa15.97■□□□□ 0.15
PKD1-207ENST00000471603 FAM204AQ9H8W3 233 aa15.97■□□□□ 0.15
PKD1-207ENST00000471603 ANKZF1Q9H8Y5 726 aa15.97■□□□□ 0.15
PKD1-207ENST00000471603 PNPLA7Q6ZV29 1317 aa15.96■□□□□ 0.15
PKD1-207ENST00000471603 SSR1P43307 286 aaKnown RBP15.96■□□□□ 0.15
PKD1-207ENST00000471603 LIG3P49916 1009 aa15.96■□□□□ 0.15
PKD1-207ENST00000471603 SCRN1Q12765 414 aa15.96■□□□□ 0.15
PKD1-207ENST00000471603 G3BP1Q13283 466 aaKnown RBP eCLIP15.96■□□□□ 0.15
PKD1-207ENST00000471603 PARP10Q53GL7 1025 aa15.96■□□□□ 0.15
PKD1-207ENST00000471603 TEX11Q8IYF3 940 aa15.96■□□□□ 0.15
PKD1-207ENST00000471603 CLASRPQ8N2M8 674 aaKnown RBP15.96■□□□□ 0.15
PKD1-207ENST00000471603 VEZTQ9HBM0 779 aa15.96■□□□□ 0.15
PKD1-207ENST00000471603 IFNKQ9P0W0 207 aa15.96■□□□□ 0.15
PKD1-207ENST00000471603 IFIT2P09913 472 aaKnown RBP15.96■□□□□ 0.14
PKD1-207ENST00000471603 GCFC2P16383 781 aaKnown RBP15.96■□□□□ 0.14
PKD1-207ENST00000471603 PTH1RQ03431 593 aa15.96■□□□□ 0.14
PKD1-207ENST00000471603 TFCP2Q12800 502 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms