RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 EAPPQ56P03 285 aaPredicted RBP13.78□□□□□ -0.2
FN1-217ENST00000471193 C16orf86Q6ZW13 317 aa13.78□□□□□ -0.2
FN1-217ENST00000471193 METTL16Q86W50 562 aaKnown RBP13.78□□□□□ -0.2
FN1-217ENST00000471193 ZSCAN29Q8IWY8 852 aaPredicted RBP13.78□□□□□ -0.2
FN1-217ENST00000471193 CDAN1Q8IWY9 1227 aa13.78□□□□□ -0.2
FN1-217ENST00000471193 TEPSINQ96N21 525 aa13.78□□□□□ -0.2
FN1-217ENST00000471193 CSRNP1Q96S65 589 aa13.78□□□□□ -0.2
FN1-217ENST00000471193 DEFB129Q9H1M3 183 aa13.78□□□□□ -0.2
FN1-217ENST00000471193 RNF41Q9H4P4 317 aaPredicted RBP13.78□□□□□ -0.2
FN1-217ENST00000471193 RRAGCQ9HB90 399 aa13.78□□□□□ -0.2
FN1-217ENST00000471193 NMRK2Q9NPI5 230 aa13.78□□□□□ -0.2
FN1-217ENST00000471193 SERPINB13Q9UIV8 391 aa13.78□□□□□ -0.2
FN1-217ENST00000471193 TAOK2Q9UL54 1235 aa13.78□□□□□ -0.2
FN1-217ENST00000471193 SCAF8Q9UPN6 1271 aaKnown RBP13.78□□□□□ -0.2
FN1-217ENST00000471193 SSC5DA1L4H1 1573 aa13.77□□□□□ -0.21
FN1-217ENST00000471193 ORC4O43929 436 aa13.77□□□□□ -0.21
FN1-217ENST00000471193 ZNF526Q8TF50 670 aaPredicted RBP13.77□□□□□ -0.21
FN1-217ENST00000471193 DCPSQ96C86 337 aaKnown RBP13.77□□□□□ -0.21
FN1-217ENST00000471193 DYNLL2Q96FJ2 89 aa13.77□□□□□ -0.21
FN1-217ENST00000471193 JAKMIP1Q96N16 626 aaKnown RBP13.77□□□□□ -0.21
FN1-217ENST00000471193 TM6SF1Q9BZW5 370 aa13.77□□□□□ -0.21
FN1-217ENST00000471193 DNAJC18Q9H819 358 aa13.77□□□□□ -0.21
FN1-217ENST00000471193 TSHZ2Q9NRE2 1034 aa13.77□□□□□ -0.21
FN1-217ENST00000471193 PI4KBQ9UBF8 816 aa13.77□□□□□ -0.21
FN1-217ENST00000471193 POTEIP0CG38 1075 aa13.76□□□□□ -0.21
FN1-217ENST00000471193 POTEJP0CG39 1038 aa13.76□□□□□ -0.21
FN1-217ENST00000471193 PDE4BQ07343 736 aa13.76□□□□□ -0.21
FN1-217ENST00000471193 MFSD6Q6ZSS7 791 aa13.76□□□□□ -0.21
FN1-217ENST00000471193 MB21D2Q8IYB1 491 aaPredicted RBP13.76□□□□□ -0.21
FN1-217ENST00000471193 STK11IPQ8N1F8 1099 aa13.76□□□□□ -0.21
FN1-217ENST00000471193 SLC44A5Q8NCS7 719 aa13.76□□□□□ -0.21
FN1-217ENST00000471193 NCOA7Q8NI08 942 aa13.76□□□□□ -0.21
FN1-217ENST00000471193 NEK1Q96PY6 1258 aa13.76□□□□□ -0.21
FN1-217ENST00000471193 CNNM2Q9H8M5 875 aa13.76□□□□□ -0.21
FN1-217ENST00000471193 SWAP70Q9UH65 585 aa13.76□□□□□ -0.21
FN1-217ENST00000471193 ADM5C9JUS6 153 aa13.75□□□□□ -0.21
FN1-217ENST00000471193 CASTP20810 708 aaKnown RBP13.75□□□□□ -0.21
FN1-217ENST00000471193 PSMA5P28066 241 aa13.75□□□□□ -0.21
FN1-217ENST00000471193 SHMT1P34896 483 aa13.75□□□□□ -0.21
FN1-217ENST00000471193 CDK8P49336 464 aa13.75□□□□□ -0.21
FN1-217ENST00000471193 NT5C2P49902 561 aa13.75□□□□□ -0.21
FN1-217ENST00000471193 TRDNQ13061 729 aa13.75□□□□□ -0.21
FN1-217ENST00000471193 COL9A3Q14050 684 aaPredicted RBP13.75□□□□□ -0.21
FN1-217ENST00000471193 RABEP1Q15276 862 aa13.75□□□□□ -0.21
FN1-217ENST00000471193 RALYLQ86SE5 291 aaKnown RBP13.75□□□□□ -0.21
FN1-217ENST00000471193 LDHDQ86WU2 507 aa13.75□□□□□ -0.21
FN1-217ENST00000471193 FOXP4Q8IVH2 680 aaPredicted RBP13.75□□□□□ -0.21
FN1-217ENST00000471193 SULF1Q8IWU6 871 aa13.75□□□□□ -0.21
FN1-217ENST00000471193 CRACR2BQ8N4Y2 399 aaPredicted RBP13.75□□□□□ -0.21
FN1-217ENST00000471193 KRT23Q9C075 422 aa13.75□□□□□ -0.21
FN1-217ENST00000471193 ZNF287Q9HBT7 754 aa13.75□□□□□ -0.21
FN1-217ENST00000471193 ZSWIM6Q9HCJ5 1215 aa13.75□□□□□ -0.21
FN1-217ENST00000471193 INCENPQ9NQS7 918 aa13.75□□□□□ -0.21
FN1-217ENST00000471193 HERC5Q9UII4 1024 aaKnown RBP13.75□□□□□ -0.21
FN1-217ENST00000471193 PLIN4Q96Q06 1357 aa13.74□□□□□ -0.21
FN1-217ENST00000471193 PAPPA2Q9BXP8 1791 aa13.74□□□□□ -0.21
FN1-217ENST00000471193 FAM196BA6NMK8 535 aa13.74□□□□□ -0.21
FN1-217ENST00000471193 B4E1Z4 1266 aa13.74□□□□□ -0.21
FN1-217ENST00000471193 TBC1D12O60347 775 aa13.74□□□□□ -0.21
FN1-217ENST00000471193 PRDM1O75626 825 aa13.74□□□□□ -0.21
FN1-217ENST00000471193 HMGB1P09429 215 aaKnown RBP13.74□□□□□ -0.21
FN1-217ENST00000471193 SLURP2P0DP57 97 aa13.74□□□□□ -0.21
FN1-217ENST00000471193 RASA1P20936 1047 aa13.74□□□□□ -0.21
FN1-217ENST00000471193 MAP3K10Q02779 954 aa13.74□□□□□ -0.21
FN1-217ENST00000471193 BLOC1S2Q6QNY1 142 aa13.74□□□□□ -0.21
FN1-217ENST00000471193 KRT26Q7Z3Y9 468 aa13.74□□□□□ -0.21
FN1-217ENST00000471193 NKX2-3Q8TAU0 364 aa13.74□□□□□ -0.21
FN1-217ENST00000471193 UPF3BQ9BZI7 483 aaKnown RBP13.74□□□□□ -0.21
FN1-217ENST00000471193 GREB1LQ9C091 1923 aaPredicted RBP13.74□□□□□ -0.21
FN1-217ENST00000471193 WDR19Q8NEZ3 1342 aa13.73□□□□□ -0.21
FN1-217ENST00000471193 MYH8P13535 1937 aa13.73□□□□□ -0.21
FN1-217ENST00000471193 KDM4AO75164 1064 aa13.73□□□□□ -0.21
FN1-217ENST00000471193 RPS6KB1P23443 525 aa13.73□□□□□ -0.21
FN1-217ENST00000471193 ANTXR2P58335 489 aa13.73□□□□□ -0.21
FN1-217ENST00000471193 RRP12Q5JTH9 1297 aaKnown RBP13.73□□□□□ -0.21
FN1-217ENST00000471193 NBPF12Q5TAG4 269 aaPredicted RBP13.73□□□□□ -0.21
FN1-217ENST00000471193 TATDN1Q6P1N9 297 aa13.73□□□□□ -0.21
FN1-217ENST00000471193 RUFY3Q7L099 469 aa13.73□□□□□ -0.21
FN1-217ENST00000471193 ESR2Q92731 530 aa13.73□□□□□ -0.21
FN1-217ENST00000471193 HOOK2Q96ED9 719 aa13.73□□□□□ -0.21
FN1-217ENST00000471193 TRIM34Q9BYJ4 488 aa13.73□□□□□ -0.21
FN1-217ENST00000471193 MKNK2Q9HBH9 465 aa13.73□□□□□ -0.21
FN1-217ENST00000471193 TOMM22Q9NS69 142 aa13.73□□□□□ -0.21
FN1-217ENST00000471193 CLEC11AQ9Y240 323 aa13.73□□□□□ -0.21
FN1-217ENST00000471193 CPA1P15085 419 aa13.72□□□□□ -0.21
FN1-217ENST00000471193 MCM5P33992 734 aa13.72□□□□□ -0.21
FN1-217ENST00000471193 CYB5R4Q7L1T6 521 aa13.72□□□□□ -0.21
FN1-217ENST00000471193 CDC37L1Q7L3B6 337 aa13.72□□□□□ -0.21
FN1-217ENST00000471193 DHX32Q7L7V1 743 aaKnown RBP13.72□□□□□ -0.21
FN1-217ENST00000471193 CDCA5Q96FF9 252 aa13.72□□□□□ -0.21
FN1-217ENST00000471193 GLIS2Q9BZE0 524 aaPredicted RBP13.72□□□□□ -0.21
FN1-217ENST00000471193 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.72□□□□□ -0.21
FN1-217ENST00000471193 GPBP1L1Q9HC44 474 aaPredicted RBP13.72□□□□□ -0.21
FN1-217ENST00000471193 CYP46A1Q9Y6A2 500 aa13.72□□□□□ -0.21
FN1-217ENST00000471193 PRC1O43663 620 aa13.71□□□□□ -0.21
FN1-217ENST00000471193 RANBP6O60518 1105 aaKnown RBP13.71□□□□□ -0.21
FN1-217ENST00000471193 EXOSC10Q01780 885 aaKnown RBP13.71□□□□□ -0.21
FN1-217ENST00000471193 PRAMEF18Q5VWM3 479 aa13.71□□□□□ -0.21
FN1-217ENST00000471193 DCAF15Q66K64 600 aa13.71□□□□□ -0.21
FN1-217ENST00000471193 MAP1SQ66K74 1059 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms